Cloned (Comment) | Organism |
---|---|
gene HcCCR1, sequence comparisons and phylogenetic analysis, quantitative gene expression analysis | Hibiscus cannabinus |
Localization | Comment | Organism | GeneOntology No. | Textmining |
---|---|---|---|---|
cytosol | HcCCR1 does not contain any transmembrane helices and is therefore assumed to be localized in cytosol | Hibiscus cannabinus | 5829 | - |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Hibiscus cannabinus | D9ZKR8 | - |
- |
Hibiscus cannabinus C-9 | D9ZKR8 | - |
- |
Posttranslational Modification | Comment | Organism |
---|---|---|
lipoprotein | the HcCCR1 protein contains a palmitoylation site in the HcCCR1 protein | Hibiscus cannabinus |
Source Tissue | Comment | Organism | Textmining |
---|---|---|---|
flower | - |
Hibiscus cannabinus | - |
leaf | gene expression analysis reveals that HcCCR1 is highly upregulated in mature leaves of 16-week-old plants | Hibiscus cannabinus | - |
petiole | - |
Hibiscus cannabinus | - |
stem | HcCCR1 shows a lower expression in 2-week-old stems, is sharply upregulated at 4 weeks, and is then gradually downregulated. Transcript expression patterns of HcCCR1 in various tissues and organs during developmental stages, overview | Hibiscus cannabinus | - |
Subunits | Comment | Organism |
---|---|---|
? | x * 37100, about, sequence calculation | Hibiscus cannabinus |
Synonyms | Comment | Organism |
---|---|---|
CCR1 | - |
Hibiscus cannabinus |
HcCCR1 | - |
Hibiscus cannabinus |
Cofactor | Comment | Organism | Structure |
---|---|---|---|
NADPH | the enzyme contains a conserved NAD(P) binding domain VTGAGGFIASWMVKLLLEKGY | Hibiscus cannabinus |
Organism | Comment | Expression |
---|---|---|
Hibiscus cannabinus | the enzyme is first transiently downregulated by methyljasmonate and abscisic acid, after 12 h is becomes transiently upregulated | down |
Hibiscus cannabinus | the HcCCR1 gene is modulated by different external stresses, overview | additional information |
Hibiscus cannabinus | gene expression analysis reveals that HcCCR1 is highly upregulated in mature leaves of 16-week-old plants. The enzyme expression is also transiently upregulated by cold and drought, as well as salt (NaCl) treatment. The enzyme is first transiently downregulated by methyljasmonate and abscisic acid, after 12 h is becomes transiently upregulated. The enzyme is permantly upregulated by H2O2 for more than 48 h | up |
General Information | Comment | Organism |
---|---|---|
evolution | phylogenetic analysis shows that HcCCR1 is more closely related to HcCCR2 and Arabidopsis thaliana AtCCR proteins than CCR-like proteins. HcCCR1 and HcCCR2 are encoded onto two different genes | Hibiscus cannabinus |
additional information | the HcCCR1 protein contains a conserved NWYCYGK catalytic domain at the N-terminal region of the HcCCR1 protein | Hibiscus cannabinus |