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Literature summary for 1.2.1.12 extracted from

  • Robien, M.A.; Bosch, J.; Buckner, F.S.; Van Voorhis, W.C.; Worthey, E.A.; Myler, P.; Mehlin, C.; Boni, E.E.; Kalyuzhniy, O.; Anderson, L.; Lauricella, A.; Gulde, S.; Luft, J.R.; DeTitta, G.; Caruthers, J.M.; Hodgson, K.O.; Soltis, M.; Zucker, F.; Verlinde, C.L.; Merritt, E.A.; Schoenfeld, L.W.; Hol, W.G.
    Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Plasmodium falciparum at 2.25 A resolution reveals intriguing extra electron density in the active site (2006), Proteins, 62, 570-577.
    View publication on PubMed

Application

Application Comment Organism
medicine crystallography may provide structural detail for the development of lead compounds and drug design of novel antimalarials Plasmodium falciparum

Cloned(Commentary)

Cloned (Comment) Organism
into the pET14b vector for expression in Escherichia coli BL21 Star cells Plasmodium falciparum

Crystallization (Commentary)

Crystallization (Comment) Organism
the crystal structure is solved at 2.25 A resolution Plasmodium falciparum

Inhibitors

Inhibitors Comment Organism Structure
ferriprotoporphorin IX
-
Plasmodium falciparum

Localization

Localization Comment Organism GeneOntology No. Textmining
cytoplasm
-
Plasmodium falciparum 5737
-

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
36600
-
monomer Plasmodium falciparum

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
D-glyceraldehyde 3-phosphate + phosphate + NAD+ Plasmodium falciparum
-
3-phospho-D-glyceroyl phosphate + NADH + H+
-
?

Organism

Organism UniProt Comment Textmining
Plasmodium falciparum Q8IKK7
-
-

Purification (Commentary)

Purification (Comment) Organism
purified on Superflow NTA nickel resin and gel chromatography, Superdex 75 26/60 Plasmodium falciparum

Storage Stability

Storage Stability Organism
-80°C, HEPES buffer, pH 7.25, 500 mM NaCl, 5% glycerol, 2 mM DTT, 0.025% sodium azide Plasmodium falciparum

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
D-glyceraldehyde 3-phosphate + phosphate + NAD+
-
Plasmodium falciparum 3-phospho-D-glyceroyl phosphate + NADH + H+
-
?

Subunits

Subunits Comment Organism
tetramer
-
Plasmodium falciparum

Synonyms

Synonyms Comment Organism
D-glyceraldehyde-3-phosphate dehydrogenase
-
Plasmodium falciparum
glyceraldehyde-3-phosphate dehydrogenase
-
Plasmodium falciparum
PfGAPDH
-
Plasmodium falciparum

Cofactor

Cofactor Comment Organism Structure
NADH
-
Plasmodium falciparum

pI Value

Organism Comment pI Value Maximum pI Value
Plasmodium falciparum calculated
-
7.6