Literature summary for 1.14.12.18 extracted from

Zhao, Q.; Bilal, M.; Yue, S.; Hu, H.; Wang, W.; Zhang, X.
Identification of biphenyl 2, 3-dioxygenase and its catabolic role for phenazine degradation in Sphingobium yanoikuyae B1 (2017), J. Environ. Manag., 204, 494-501 .

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Cloned(Commentary)

Cloned (Comment)	Organism
expressed in Escherichia coli DH5alpha cells	Sphingobium yanoikuyae

Natural Substrates/ Products (Substrates)

Natural Substrates	Organism	Comment (Nat. Sub.)	Natural Products	Comment (Nat. Pro.)	Rev.	Reac.
biphenyl + NADH + H+ + O2	Sphingobium yanoikuyae	-	(1S,2R)-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+	-	?
biphenyl + NADH + H+ + O2	Sphingobium yanoikuyae B1	-	(1S,2R)-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+	-	?

Organism

Organism	UniProt	Comment	Textmining
Sphingobium yanoikuyae	-	-	-
Sphingobium yanoikuyae B1	-	-	-

Substrates and Products (Substrate)

Substrates	Comment Substrates	Organism	Products	Comment (Products)	Rev.	Reac.
biphenyl + NADH + H+ + O2	-	Sphingobium yanoikuyae	(1S,2R)-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+	-	?
biphenyl + NADH + H+ + O2	-	Sphingobium yanoikuyae B1	(1S,2R)-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+	-	?
phenazine + NADH + H+ + O2	-	Sphingobium yanoikuyae	1,2-dihydro-1,2-dihydroxyphenazine + NAD+	-	?
phenazine + NADH + H+ + O2	-	Sphingobium yanoikuyae B1	1,2-dihydro-1,2-dihydroxyphenazine + NAD+	-	?

Synonyms

Synonyms	Comment	Organism
biphenyl 2, 3-dioxygenase	-	Sphingobium yanoikuyae
ThebphA1fA2f	-	Sphingobium yanoikuyae

Cofactor

Cofactor	Comment	Organism	Structure
NADH	-	Sphingobium yanoikuyae

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Release 2023.1 (January 2023)