BRENDA - Enzyme Database show
show all sequences of 1.1.3.30

Novel aspects of symbiotic (polyvinyl alcohol) biodegradation

Vaclavkova, T.; Ruzicka, J.; Julinova, M.; Vicha, R.; Koutny, M.; Appl. Microbiol. Biotechnol. 76, 911-917 (2007)

Data extracted from this reference:

Activating Compound
Activating Compound
Commentary
Organism
Structure
pyrroloquinoline quinone
essential for polyvinyl alcohol degradation, another yet unknown growth factor supplied by co-isolated Rhodococcus erythropolis strain
Sphingomonas sp.
Localization
Localization
Commentary
Organism
GeneOntology No.
Textmining
additional information
activity associated with cells of co-isolated degrader strain Rhodococcus erythropolis
Sphingomonas sp.
-
-
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
no activity in Rhodococcus erythropolis
-
but supports growth and degradation of polyvinyl alcohol by Sphingomonas sp.
-
Sphingomonas sp.
-
CCM 7450, growth and PVA degradation supported by co-isolated strain Rhodococcus erythropolis OT3
-
Specific Activity [micromol/min/mg]
Specific Activity Minimum [µmol/min/mg]
Specific Activity Maximum [µmol/min/mg]
Commentary
Organism
0.0018
-
in association with the co-isolated Rhodococcus erythropolis strain, isolate able to degrade 500 mg of polyvinyl alcohol per litre in 2 weeks, no activity on 2-butanol, 2,4-pentanediol, 2-hexanol, 2-heptanol detected
Sphingomonas sp.
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
polyvinyl alcohol + O2
symbiotic biodegradation of polyvinyl alcohol, measured by hydrogen peroxide production
684619
Sphingomonas sp.
oxidized polyvinyl alcohol + H2O2
-
-
-
?
Activating Compound (protein specific)
Activating Compound
Commentary
Organism
Structure
pyrroloquinoline quinone
essential for polyvinyl alcohol degradation, another yet unknown growth factor supplied by co-isolated Rhodococcus erythropolis strain
Sphingomonas sp.
Localization (protein specific)
Localization
Commentary
Organism
GeneOntology No.
Textmining
additional information
activity associated with cells of co-isolated degrader strain Rhodococcus erythropolis
Sphingomonas sp.
-
-
Specific Activity [micromol/min/mg] (protein specific)
Specific Activity Minimum [µmol/min/mg]
Specific Activity Maximum [µmol/min/mg]
Commentary
Organism
0.0018
-
in association with the co-isolated Rhodococcus erythropolis strain, isolate able to degrade 500 mg of polyvinyl alcohol per litre in 2 weeks, no activity on 2-butanol, 2,4-pentanediol, 2-hexanol, 2-heptanol detected
Sphingomonas sp.
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
polyvinyl alcohol + O2
symbiotic biodegradation of polyvinyl alcohol, measured by hydrogen peroxide production
684619
Sphingomonas sp.
oxidized polyvinyl alcohol + H2O2
-
-
-
?
Other publictions for EC 1.1.3.30
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
740326
Li
-
Purification and enzymatic pro ...
Bacillus megaterium
Chin. J. Proc. Engin.
14
1015-1019
2014
-
-
-
-
-
-
-
-
-
-
1
1
-
1
-
-
1
-
-
-
-
-
1
-
1
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
1
-
-
-
1
-
-
-
-
1
-
1
-
-
-
1
-
-
-
-
-
-
-
-
-
695840
Kawai
Biochemistry of microbial poly ...
Bacillus megaterium, Bacillus megaterium BX1, Brevundimonas vesicularis, Brevundimonas vesicularis PD, Brevundimonas vesicularis PH, Geotrichum sp., Geotrichum sp. WF9101, Microbacterium barkeri, Microbacterium barkeri KCCM10507, no activity in Alcaligenes faecalis, no activity in Alcaligenes faecalis KK314, Paenibacillus amylolyticus, Paenibacillus amylolyticus KCCM 10508, Penicillium sp., Penicillium sp. WSH02-21, Pseudomonas sp., Sphingomonas sp., Sphingopyxis sp., Streptomyces venezuelae, Streptomyces venezuelae GY1
Appl. Microbiol. Biotechnol.
84
227-237
2009
3
-
-
-
-
-
-
-
1
-
-
18
-
28
-
-
2
-
-
2
-
-
18
-
-
-
-
-
-
-
-
-
-
-
-
3
-
-
-
-
-
-
-
-
-
-
1
-
-
18
-
-
-
2
-
2
-
-
18
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
684640
Hu
The pva operon is located on t ...
Sphingopyxis sp. 113P3, Sphingopyxis sp.
Appl. Microbiol. Biotechnol.
78
685-693
2008
-
-
1
-
-
-
-
-
1
-
-
2
-
4
-
-
-
-
-
-
1
-
4
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
1
-
-
2
-
-
-
-
-
-
1
-
4
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
684619
Vaclavkova
Novel aspects of symbiotic (po ...
no activity in Rhodococcus erythropolis, Sphingomonas sp.
Appl. Microbiol. Biotechnol.
76
911-917
2007
1
-
-
-
-
-
-
-
1
-
-
-
-
5
-
-
-
-
-
-
1
-
1
-
-
-
-
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
1
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
684752
Hu
Cell surface structure enhanci ...
Sphingopyxis sp.
Arch. Microbiol.
188
235-241
2007
1
-
-
-
-
-
-
-
1
-
-
1
-
4
-
-
-
-
-
-
1
-
2
-
1
-
-
-
1
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
1
-
-
1
-
-
-
-
-
-
1
-
2
-
1
-
-
-
1
-
-
-
-
-
-
-
-
-
671537
Yamatsu
Isolation and characterization ...
Sphingopyxis sp., Sphingopyxis sp. PVA3
Appl. Microbiol. Biotechnol.
72
804-811
2006
-
-
-
-
-
-
-
-
-
-
-
2
-
5
-
-
-
-
-
1
-
-
4
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
2
-
-
-
-
-
1
-
-
4
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
675840
Hirota-Mamoto
Cloning and expression of the ...
Sphingomonas sp. 113P3, Sphingomonas sp.
Microbiology
152
1941-1949
2006
1
-
1
-
-
-
-
-
1
2
1
-
-
12
-
-
1
-
-
-
1
1
12
2
1
-
-
-
1
-
-
-
-
-
-
1
-
1
-
-
-
-
-
-
-
-
1
2
1
-
-
-
-
1
-
-
1
1
12
2
1
-
-
-
1
-
-
-
-
-
-
-
-
-
287626
Kawagoshi
-
Purification and properties of ...
Brevundimonas vesicularis
World J. Microbiol. Biotechnol.
13
273-277
1997
-
-
-
-
-
-
5
-
-
1
2
1
-
1
-
-
1
-
-
-
1
-
15
1
1
1
1
-
1
1
1
-
-
-
-
-
-
-
-
-
-
-
-
5
-
-
-
1
2
1
-
-
-
1
-
-
1
-
15
1
1
1
1
-
1
1
1
-
-
-
-
-
-
-
287624
Shimao
Pyrroloquinoline quinone-depen ...
no activity in Pseudomonas sp., no activity in Pseudomonas sp. VM15C, Pseudomonas sp.
Appl. Environ. Microbiol.
55
275-278
1989
-
-
-
-
-
-
-
-
2
-
-
1
-
7
-
-
1
-
-
1
-
-
1
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
1
-
-
-
-
-
-
-
2
-
-
1
-
-
-
1
-
1
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
287625
Shimao
Existence of a novel enzyme, p ...
Pseudomonas sp.
Appl. Environ. Microbiol.
51
268-275
1986
-
-
-
-
-
-
-
-
2
-
1
2
-
3
-
-
1
-
-
1
1
-
11
-
1
-
-
-
-
-
-
1
-
-
-
-
-
-
1
-
-
-
-
-
-
-
2
-
1
2
-
-
-
1
-
1
1
-
11
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
287623
Shimao
Localization of polyvinyl alco ...
Pseudomonas sp.
Appl. Environ. Microbiol.
49
8-10
1985
-
-
-
-
-
-
-
-
2
-
-
3
-
4
-
-
1
-
-
1
-
-
3
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
2
-
-
3
-
-
-
1
-
1
-
-
3
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-