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Literature summary for 1.1.2.10 extracted from
- Expression, purification and properties of the enzymes involved in lanthanide-dependent alcohol oxidation XoxF4, XoxF5, ExaF/PedH, and XoxG4 (2021), Methods Enzymol., 650, 81-96 .
Activating Compound
| Activating Compound | Comment | Organism | Structure |
|---|---|---|---|
| NH4+ | stimulates | Methylotenera mobilis |  |
| NH4+ | required | Sinorhizobium meliloti | |
| NH4+ | required | Methylorubrum extorquens | |
| NH4+ | required | Bradyrhizobium diazoefficiens | |
| NH4+ | required | Methylomonas sp. LW13 | |
| NH4+ | required | Methyloversatilis discipulorum | |
| NH4+ | required | Grimontia marina | |
| NH4+ | required | Rhodovulum kholense | |
| NH4+ | required | Tistlia consotensis | |
Cloned(Commentary)
| Cloned (Comment) | Organism |
|---|---|
| expression in Methylobacterium extorquens AM1 | Sinorhizobium meliloti |
| expression in Methylobacterium extorquens AM1 | Methylomonas sp. LW13 |
| expression in Methylobacterium extorquens AM1 | Rhodovulum kholense |
| expression in Methylobacterium extorquens AM1 | Tistlia consotensis |
| expression in Methylotenera mobilis JLW8 | Methylotenera mobilis |
| expression Methylobacterium extorquens AM1 | Methylorubrum extorquens |
| expression Methylobacterium extorquens AM1 | Bradyrhizobium diazoefficiens |
| expression Methylobacterium extorquens AM1 | Methyloversatilis discipulorum |
| expression Methylobacterium extorquens AM1 | Grimontia marina |
KM Value [mM]
| KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
|---|---|---|---|---|---|
| 0.012 | - |
methanol | pH and temperature not specified in the publication, methanol dehydrogenase XoxF5-2 | Methylorubrum extorquens | |
| 0.015 | - |
methanol | pH and temperature not specified in the publication | Bradyrhizobium diazoefficiens | |
| 0.015 | - |
methanol | pH and temperature not specified in the publication | Methyloversatilis discipulorum | |
| 0.017 | - |
methanol | pH and temperature not specified in the publication | Rhodovulum kholense | |
| 0.021 | - |
methanol | pH and temperature not specified in the publication, methanol dehydrogenase XoxF5-1 | Methylorubrum extorquens | |
| 0.023 | - |
methanol | pH and temperature not specified in the publication | Sinorhizobium meliloti | |
| 0.024 | - |
methanol | pH and temperature not specified in the publication | Grimontia marina | |
| 0.03 | - |
methanol | pH and temperature not specified in the publication | Tistlia consotensis | |
| 0.039 | - |
methanol | pH and temperature not specified in the publication | Methylomonas sp. LW13 | |
| 0.039 | - |
methanol | pH and temperature not specified in the publication, methanol dehydrogenase XoxF4-1 | Methylotenera mobilis | |
| 0.042 | - |
methanol | pH and temperature not specified in the publication, methanol dehydrogenase XoxF4-1 | Methylotenera mobilis | |
Metals/Ions
| Metals/Ions | Comment | Organism | Structure |
|---|---|---|---|
| Dy3+ | lanthanide-dependent enzyme | Methylotenera mobilis | |
| La3+ | lanthanide-dependent enzyme | Sinorhizobium meliloti | |
| La3+ | lanthanide-dependent enzyme | Methylorubrum extorquens | |
| La3+ | lanthanide-dependent enzyme | Bradyrhizobium diazoefficiens | |
| La3+ | lanthanide-dependent enzyme | Methylotenera mobilis | |
| La3+ | lanthanide-dependent enzyme | Methylomonas sp. LW13 | |
| La3+ | lanthanide-dependent enzyme | Methyloversatilis discipulorum | |
| La3+ | lanthanide-dependent enzyme | Grimontia marina | |
| La3+ | lanthanide-dependent enzyme | Rhodovulum kholense | |
| La3+ | lanthanide-dependent enzyme | Tistlia consotensis | |
| Nd3+ | lanthanide-dependent enzyme | Sinorhizobium meliloti | |
| Nd3+ | lanthanide-dependent enzyme | Methylorubrum extorquens | |
| Nd3+ | lanthanide-dependent enzyme | Bradyrhizobium diazoefficiens | |
| Nd3+ | lanthanide-dependent enzyme | Methylomonas sp. LW13 | |
| Nd3+ | lanthanide-dependent enzyme | Methyloversatilis discipulorum | |
| Nd3+ | lanthanide-dependent enzyme | Grimontia marina | |
| Nd3+ | lanthanide-dependent enzyme | Rhodovulum kholense | |
| Nd3+ | lanthanide-dependent enzyme | Tistlia consotensis | |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Bradyrhizobium diazoefficiens | - |
- |
- |
| Bradyrhizobium diazoefficiens USDA 110 | - |
- |
- |
| Grimontia marina | - |
- |
- |
| Grimontia marina CECT 8713 | - |
- |
- |
| Methylomonas sp. LW13 | - |
- |
- |
| Methylorubrum extorquens | - |
- |
- |
| Methylotenera mobilis | - |
- |
- |
| Methylotenera mobilis JLW8 | - |
- |
- |
| Methyloversatilis discipulorum | B2LME2 | - |
- |
| Methyloversatilis discipulorum FAM1 | B2LME2 | - |
- |
| Rhodovulum kholense | - |
- |
- |
| Rhodovulum kholense DSM 19783 | - |
- |
- |
| Sinorhizobium meliloti | - |
- |
- |
| Sinorhizobium meliloti 5A14 | - |
- |
- |
| Tistlia consotensis | - |
- |
- |
| Tistlia consotensis DSM 21585 | - |
- |
- |
Purification (Commentary)
| Purification (Comment) | Organism |
|---|---|
- |
Sinorhizobium meliloti |
- |
Methylorubrum extorquens |
- |
Bradyrhizobium diazoefficiens |
- |
Methylotenera mobilis |
- |
Methylomonas sp. LW13 |
- |
Methyloversatilis discipulorum |
- |
Grimontia marina |
- |
Rhodovulum kholense |
- |
Tistlia consotensis |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| methanol + phenazine methosulfate | methanol is the preferred substrate | Sinorhizobium meliloti | formaldehyde + reduced phenazine methosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Methylorubrum extorquens | formaldehyde + reduced phenazine methosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Bradyrhizobium diazoefficiens | formaldehyde + reduced phenazine methosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Methylotenera mobilis | formaldehyde + reduced phenazine methosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Methylomonas sp. LW13 | formaldehyde + reduced phenazine methosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Methyloversatilis discipulorum | formaldehyde + reduced phenazine methosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Tistlia consotensis | formaldehyde + reduced phenazine methosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Bradyrhizobium diazoefficiens USDA 110 | formaldehyde + reduced phenazine methosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Sinorhizobium meliloti 5A14 | formaldehyde + reduced phenazine methosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Methyloversatilis discipulorum FAM1 | formaldehyde + reduced phenazine methosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Methylotenera mobilis JLW8 | formaldehyde + reduced phenazine methosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Tistlia consotensis DSM 21585 | formaldehyde + reduced phenazine methosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Grimontia marina | formaldehyde + reduced phenazine ethosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Rhodovulum kholense | formaldehyde + reduced phenazine ethosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Grimontia marina CECT 8713 | formaldehyde + reduced phenazine ethosulfate | - |
? | |
| methanol + phenazine methosulfate | methanol is the preferred substrate | Rhodovulum kholense DSM 19783 | formaldehyde + reduced phenazine ethosulfate | - |
? | |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| XoxF4-1 | - |
Methylotenera mobilis |
| XoxF4-2 | - |
Methylotenera mobilis |
| XoxF5 | - |
Sinorhizobium meliloti |
| XoxF5 | - |
Bradyrhizobium diazoefficiens |
| XoxF5 | - |
Methylomonas sp. LW13 |
| XoxF5 | - |
Methyloversatilis discipulorum |
| XoxF5 | - |
Grimontia marina |
| XoxF5 | - |
Rhodovulum kholense |
| XoxF5 | - |
Tistlia consotensis |
| XoxF5-1 | - |
Methylorubrum extorquens |
| XoxF5-2 | - |
Methylorubrum extorquens |
pH Optimum
| pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
|---|---|---|---|
| 9 | - |
- |
Methylotenera mobilis |
| 9 | 9.5 | - |
Sinorhizobium meliloti |
| 9 | 9.5 | - |
Methylorubrum extorquens |
| 9 | 9.5 | - |
Bradyrhizobium diazoefficiens |
| 9 | 9.5 | - |
Methylomonas sp. LW13 |
| 9 | 9.5 | - |
Methyloversatilis discipulorum |
| 9 | 9.5 | - |
Grimontia marina |
| 9 | 9.5 | - |
Rhodovulum kholense |
| 9 | 9.5 | - |
Tistlia consotensis |
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