Ligand 1-beta-D-arabinosylcytosine
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Basic Ligand Information
Molecular Structure

C9H13N3O5
1-beta-D-arabinosylcytosine
UHDGCWIWMRVCDJ-JDNPWWSISA-N
Roles as Enzyme Ligand
In Vivo Substrate in Enzyme-catalyzed Reactions (1 result)
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NTP + 1-beta-D-arabinosylcytosine = NDP + 1-beta-D-arabinosylcytosine 5'-phosphate
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Substrate in Enzyme-catalyzed Reactions (2 results)
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ATP + 1-beta-D-arabinosylcytosine = ADP + 1-beta-D-arabinosylcytosine 5'-phosphate
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NTP + 1-beta-D-arabinosylcytosine = NDP + 1-beta-D-arabinosylcytosine 5'-phosphate
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Activator in Enzyme-catalyzed Reactions (1 result)
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i.e. cytarabine, 0.001 mM, stimulation
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Enzyme Kinetic Parameters
kcat Value (Turnover Number) (3 results)
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0.34
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wild type enzyme, in 100 mM Tris, pH 7.5, 100 mM KCl, 10 mM MgCl2 and 1 mM ATP, at 37°C
0.79
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mutant enzyme R104L/D133A, in 100 mM Tris, pH 7.5, 100 mM KCl, 10 mM MgCl2 and 1 mM ATP, at 37°C
1.43
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mutant enzyme R104M/D133A, in 100 mM Tris, pH 7.5, 100 mM KCl, 10 mM MgCl2 and 1 mM ATP, at 37°C
KM Value (3 results)
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0.0131
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wild type enzyme, in 100 mM Tris, pH 7.5, 100 mM KCl, 10 mM MgCl2 and 1 mM ATP, at 37°C
0.0506
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mutant enzyme R104L/D133A, in 100 mM Tris, pH 7.5, 100 mM KCl, 10 mM MgCl2 and 1 mM ATP, at 37°C
0.1365
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mutant enzyme R104M/D133A, in 100 mM Tris, pH 7.5, 100 mM KCl, 10 mM MgCl2 and 1 mM ATP, at 37°C
References & Links
Literature References (5)
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Treatment of normal and malignant cells with nucleoside analogues and etoposide enhances deoxycytidine kinase activity
1999
Spasokoukotskaja, T.; Sasvari-Szekely, M.; Keszler, G.; Albertioni, F.; Eriksson, S.; Staub, M.
Eur. J. Cancer
35
1862-1867
Identification of in vivo phosphorylation sites on human deoxycytidine kinase. Role of Ser-74 in the control of enzyme activity
2006
Smal, C.; Vertommen, D.; Bertrand, L.; Ntamashimikiro, S.; Rider, M.H.; Van Den Neste, E.; Bontemps, F.
J. Biol. Chem.
281
4887-4893
Systematic exploration of active site mutations on human deoxycytidine kinase substrate specificity
2008
Iyidogan, P.; Lutz, S.
Biochemistry
47
4711-4720
Extending thymidine kinase activity to the catalytic repertoire of human deoxycytidine kinase
2009
Hazra, S.; Sabini, E.; Ort, S.; Konrad, M.; Lavie, A.
Biochemistry
48
1256-1263
Novel potent inhibitors of deoxycytidine kinase identified and compared by multiple assays
2010
Yu, X.C.; Miranda, M.; Liu, Z.; Patel, S.; Nguyen, N.; Carson, K.; Liu, Q.; Swaffield, J.C.
J. Biomol. Screen.
15
72-79
Links to other databases for 1-beta-D-arabinosylcytosine