print visible entries

print all entries

Ligand beta-L-arabinofuranose

Basic Ligand Information

Molecular Structure

close all tables

open all tables

Roles as Enzyme Ligand

In Vivo Product in Enzyme-catalyzed Reactions (5 results)

top print hide

Show Natural Product (5 entries)

EC NUMBER

PROVEN IN VIVO REACTION

REACTION DIAGRAM

LITERATURE

ENZYME 3D STRUCTURE

3.2.1.185

beta-L-arabinofuranosyl-(1->2)-beta-L-arabinofuranose + H2O = 2 beta-L-arabinofuranose

-

3wkx, 3D-view

3.2.1.185

beta-L-arabinofuranosyl-(1->2)-beta-L-arabinofuranose + H2O = 2 beta-L-arabinofuranose

-

3wrg, 3D-view

3.2.1.185

beta-L-arabinofuranosyl-L-hydroxyproline + H2O = beta-L-arabinofuranose + L-hydroxyproline

-

3wkx, 3D-view

3.2.1.185

beta-L-arabinofuranosyl-L-hydroxyproline + H2O = beta-L-arabinofuranose + L-hydroxyproline

-

3wrg, 3D-view

3.2.1.185

4 entries

3.2.1.55

sugar beet arabinan + H2O = arabinose + ?

-

3wn0, 3D-view

Substrate in Enzyme-catalyzed Reactions (5 results)

top print hide

Show Substrate (5 entries)

EC NUMBER

REACTION

REACTION DIAGRAM

LITERATURE

ENZYME 3D STRUCTURE

1.1.1.120

beta-L-arabinose + NADP+ = L-arabinolactone + NADPH

285791

-

1.1.1.138

arabinose + NADPH + H+ = arabinitol + NADP+

654271

-

2.4.1.10

sucrose + arabinose = ?

756953

-

2.4.1.64

beta-D-glucose 1-phosphate + beta-L-arabinose = ?

721346

-

3.2.1.23

lactose + arabinose = ?

171351

-

Product in Enzyme-catalyzed Reactions (32 results)

top print hide

Show Product (32 entries)

EC NUMBER

REACTION

REACTION DIAGRAM

LITERATURE

ENZYME 3D STRUCTURE

1.1.3.40

D-arabinitol + O2 = arabinose + H2O2

-

-

3.1.1.73

feruloyl arabinoside + H2O = ferulic acid + coumaric acid + cinnamic acid + arabinose

-

-

3.1.3.68

Arabinose 5-phosphate + H2O = Arabinose + phosphate

-

-

3.2.1.136

xylan + H2O = xylose + arabinose + xylobiose + high-molecular-mass oligosaccharides

-

-

3.2.1.185

beta-L-arabinofuranosyl-(1->2)-beta-L-arabinofuranose + H2O = 2 beta-L-arabinofuranose

-

3wkx, 3D-view

3.2.1.185

beta-L-arabinofuranosyl-(1->2)-beta-L-arabinofuranose + H2O = 2 beta-L-arabinofuranose

-

3wrg, 3D-view

3.2.1.185

beta-L-arabinofuranosyl-(1->2)-beta-L-arabinofuranosyl-L-hydroxyproline + H2O = 2 beta-L-arabinofuranose + L-hydroxyproline

-

3wkx, 3D-view

3.2.1.185

beta-L-arabinofuranosyl-(1->2)-beta-L-arabinofuranosyl-L-hydroxyproline + H2O = 2 beta-L-arabinofuranose + L-hydroxyproline

-

3wrg, 3D-view

3.2.1.185

beta-L-arabinofuranosyl-L-hydroxyproline + H2O = beta-L-arabinofuranose + L-hydroxyproline

-

3wkx, 3D-view

3.2.1.185

beta-L-arabinofuranosyl-L-hydroxyproline + H2O = beta-L-arabinofuranose + L-hydroxyproline

-

3wrg, 3D-view

3.2.1.185

6 entries

3.2.1.21

p-nitrophenyl-beta-L-arabinopyranoside + H2O = p-nitrophenol + beta-L-arabinose

-

-

3.2.1.22

p-nitrophenyl-beta-L-arabinopyranoside + H2O = p-nitrophenol + beta-L-arabinose

-

-

3.2.1.23

4-nitrophenyl beta-L-arabinoside + H2O = 4-nitrophenol + beta-L-arabinose

-

-

3.2.1.37

arabinoxylan + H2O = xylose + arabinose

-

5z5f, 3D-view

3.2.1.37

arabinoxylan + H2O = xylose + arabinose

-

5z5i, 3D-view

3.2.1.37

cell wall polysaccharide from alfalfa root + H2O = xylose + arabinose

-

5z5f, 3D-view

3.2.1.37

cell wall polysaccharide from alfalfa root + H2O = xylose + arabinose

-

5z5i, 3D-view

3.2.1.55

2(3)-alpha-L-arabinofuranosyl xylotriose + H2O = arabinose + xylotriose

-

3wn0, 3D-view

3.2.1.55

23,33-di-alpha-L-arabinofuranosylxylotriose + H2O = arabinose + ?

-

3wn0, 3D-view

3.2.1.55

3(3)-alpha-L-arabinofuranosyl xylotetraose + H2O = arabinose + xylotetraose

-

3wn0, 3D-view

3.2.1.55

gum arabic + H2O = arabinose

-

3wn0, 3D-view

3.2.1.55

rye arabinoxylan + H2O = arabinose + ?

-

3wn0, 3D-view

3.2.1.55

sugar beet arabinan + H2O = arabinose + ?

-

3wn0, 3D-view

3.2.1.55

wheat arabinoxylan + H2O = arabinose + ?

-

3wn0, 3D-view

3.2.1.37

4 entries

3.2.1.55

7 entries

3.2.1.8

arabinoxylan + H2O = arabinose + xylose + xylobiose

-

-

3.2.1.88

p-nitrophenyl beta-L-arabinoside + H2O = p-nitrophenol + beta-L-arabinose

136932,

-

3.2.1.99

cell wall polysaccharide + H2O = arabinose + galactose + rhamnose + fucose

136937

3d5z, 3D-view

3.2.1.99

cell wall polysaccharide + H2O = arabinose + galactose + rhamnose + fucose

136937

3d61, 3D-view

3.2.1.99

debranched arabinan + H2O = arabinose + arabinobiose + arabinotriose

-

3d5z, 3D-view

3.2.1.99

debranched arabinan + H2O = arabinose + arabinobiose + arabinotriose

-

3d61, 3D-view

3.2.1.99

4 entries

4.1.3.3

3-deoxy-manno-oct-ulosonic acid = arabinose + pyruvate

-

-

5.1.3.3

alpha-L-arabinose = beta-L-arabinose

, 2362, 2370

-

Activator in Enzyme-catalyzed Reactions (1 result)

top print hide

Show Activating Compound (1 entry)

EC NUMBER

COMMENTARY

LITERATURE

ENZYME 3D STRUCTURE

5.4.99.5

expression can be induced by arabinose under the control of the araBAD promoter

694070

-

Inhibitor in Enzyme-catalyzed Reactions (4 results)

top print hide

Show Inhibitors (4 entries)

EC NUMBER

COMMENTARY

LITERATURE

ENZYME 3D STRUCTURE

3.2.1.37

full activity is observed in the presence of up to 50 mM arabinose. Activity is reduced to 88%, 80% and 70% of maximum activity at 100 mM, 150 mM and 200 mM arabinose, respectively

749634

5z5f, 3D-view

3.2.1.37

full activity is observed in the presence of up to 50 mM arabinose. Activity is reduced to 88%, 80% and 70% of maximum activity at 100 mM, 150 mM and 200 mM arabinose, respectively

749634

5z5i, 3D-view

3.2.1.37

2 entries

3.2.1.55

noncompetitive inhibitor, 56% inhibition at 50 mM

677783

3wn0, 3D-view

3.2.1.89

o-nitrophenyl-beta-D-galactoside hydrolyzing activity

136936

-

3D Structure of Enzyme-Ligand-Complex (PDB) (19 results)

top print hide

Show 3D Structure of Enzyme-Ligand-Complex (PDB) (19 entries)

EC NUMBER

ENZYME 3D STRUCTURE

3.2.1.185

3wkx, 3D-view

3.2.1.185

3wrg, 3D-view

3.2.1.185

3wkx, 3D-view

3.2.1.185

3wrg, 3D-view

3.2.1.185

3wkx, 3D-view

3.2.1.185

3wrg, 3D-view

3.2.1.37

5z5f, 3D-view

3.2.1.37

5z5i, 3D-view

3.2.1.37

5z5f, 3D-view

3.2.1.37

5z5i, 3D-view

3.2.1.37

5z5f, 3D-view

3.2.1.37

5z5i, 3D-view

3.2.1.185

6 entries

3.2.1.37

6 entries

3.2.1.55

3wn0, 3D-view

3.2.1.99

3d5z, 3D-view

3.2.1.99

3d61, 3D-view

3.2.1.99

3d5z, 3D-view

3.2.1.99

3d61, 3D-view

3.2.1.99

3d5z, 3D-view

3.2.1.99

3d61, 3D-view

3.2.1.99

6 entries

Enzyme Kinetic Parameters

K_M Value (1 result)

top print hide

Show KM Value (1 entry)

EC NUMBER

KM VALUE [MM]

KM VALUE MAXIMUM [MM]

COMMENTARY

LITERATURE

1.1.1.138

385

-

pH 7.5, 37°C

654271

References & Links

Literature References (13)

top print hide

Show Reference (13 entries)

BRENDA REFERENCE ID

PUBMED ID

TITLE

YEAR

AUTHORS

JOURNAL

VOLUME

PAGES

2362

13799037

Mutarotase from Penicillium notatum. I. Purification, assay, and general properties of the enzyme

1960

Bentley, R.; Bhate, D.S.

J. Biol. Chem.

235

1219-1224

2370

805343

Mutarotase from higher plants

1975

Fishman, P.H.; Pentchev, P.G.; Bailey, J.M.

Methods Enzymol.

41

484-487

136932

-

Further characterization of beta-L-arabinosidase from Cajanus indicus

1983

Dey, P.M.

Biochim. Biophys. Acta

746

8-13

136936

-

Purification and properties of two galactanases from Penicillium citrinum

1985

Nakano, H.; Takenishi, S.; Watanabe, Y.

Agric. Biol. Chem.

49

3445-3454

136937

-

Hemi-cellulases in enzymic fruit processing

1982

Voragen, A.G.J.; Geerst, F.; Pilnik, W.

Util. Enzymes Technol. Aliment. , Symp. Int. (Dupuy, P. , ed. ), Tech. Doc. Lavoisier Paris

-

497-502

171351

-

Purification, properties and characterization of a high-molecular-mass beta-galactosidase isoenzyme from Thermus aquaticus

1997

Berger, J.L.; Lee, B.H.; Lacroix, C.

Biotechnol. Appl. Biochem.

25

29-41

285791

5845848

Enzymatic characterization and comparison of three sugar dehydrogenases from a pseudomonad

1965

Cline, A.L.; Hu, A.S.L.

J. Biol. Chem.

240

4493-4497

654271

12902227

Purification and characterization of a novel mannitol dehydrogenase from a newly isolated strain of Candida magnoliae

2003

Lee, J.K.; Koo, B.S.; Kim, S.Y.; Hyun, H.H.

Appl. Environ. Microbiol.

69

4438-4447

677783

17955189

Characterization of a family 54 alpha -L-arabinofuranosidase from Aureobasidium pullulans

2008

de Wet, B.J.; Matthew, M.K.; Storbeck, K.; van Zyl, W.H.; Prior, B.A.

Appl. Microbiol. Biotechnol.

77

975-983

694070

18786575

Alternative splicing: A novel mechanism of regulation identified in the chorismate mutase gene of the potato cyst nematode Globodera rostochiensis

2008

Lu, S.W.; Tian, D.; Borchardt-Wier, H.B.; Wang, X.

Mol. Biochem. Parasitol.

162

1-15

721346

21803886

Enzymatic properties and substrate specificity of the trehalose phosphorylase from Caldanaerobacter subterraneus

2011

Van der Borght, J.; Chen, C.; Hoflack, L.; Van Renterghem, L.; Desmet, T.; Soetaert, W.

Appl. Environ. Microbiol.

77

6939-6944

749634

29728961

Purification and characterisation of a thermostable beta-xylosidase from Aspergillus niger van Tieghem of potential application in lignocellulosic bioethanol production

2018

Boyce, A.; Walsh, G.

Appl. Biochem. Biotechnol.

186

712-730

756953

30659880

Catalytic biosynthesis of levan and short-chain fructooligosaccharides from sucrose-containing feedstocks by employing the levansucrase from Leuconostoc mesenteroides MTCC10508

2019

Jadaun, J.S.; Narnoliya, L.K.; Agarwal, N.; Singh, S.P.

Int. J. Biol. Macromol.

127

486-495

Links to other databases for beta-L-arabinofuranose

top print hide

Show Links (1 entry)

ChEBI

PubChem