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Information on EC 7.5.2.13 - ABC-type D-xylose/L-arabinose transporter
for references in articles please use BRENDA:EC7.5.2.13
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EC Tree 7 Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.13 ABC-type D-xylose/L-arabinose transporter
IUBMB Comments
ATP-binding cassette (ABC) type transporter with a 10-transmembrane-spanning (TMD) subunit and a single nucleotide binding domain. The enzyme from the archaeon Sulfolobus acidocaldarius interacts with an extracytoplasmic sugar-binding protein and mediates the uptake of of D-xylose and L-arabinose (cf. EC 7.5.2.10, ABC-type D-xylose transporter and EC 7.5.2.12, ABC-type L-arabinose transporter).
The expected taxonomic range for this enzyme is: Eukaryota, Archaea
Reaction Schemes
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D-xylose-[xylose-binding protein][side 1]
=
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+
[xylose-binding protein][side 1]
+
+
=
+
+
+
+
+
L-arabinose-[arabinose-binding protein][side 1]
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[arabinose-binding protein][side 1]
Synonyms
xacghijk, carbohydrate uptake transporter 1, more
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SYNONYM 
ORGANISM
UNIPROT
COMMENTARY 
LITERATURE
carbohydrate uptake transporter 1
carbohydrate uptake transporter-2
Cut1
CUT2 ABC transporter
pentose specific ABC transporter
xacG
xacGHIJK
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REACTION
REACTION DIAGRAM
COMMENTARY
ORGANISM
UNIPROT
LITERATURE
ATP + H2O + D-xylose-[xylose-binding protein][side 1] = ADP + phosphate + D-xylose[side 2] + [xylose-binding protein][side 1]
ATP + H2O + L-arabinose-[arabinose-binding protein][side 1] = ADP + phosphate + L-arabinose[side 2] + [arabinose-binding protein][side 1]
ATP + H2O + D-xylose-[xylose-binding protein][side 1] = ADP + phosphate + D-xylose[side 2] + [xylose-binding protein][side 1]
(1)
Q4J711; Q4J710
ATP + H2O + D-xylose-[xylose-binding protein][side 1] = ADP + phosphate + D-xylose[side 2] + [xylose-binding protein][side 1]
-
-
-
-
ATP + H2O + D-xylose-[xylose-binding protein][side 1] = ADP + phosphate + D-xylose[side 2] + [xylose-binding protein][side 1]
(1)
-
-
ATP + H2O + L-arabinose-[arabinose-binding protein][side 1] = ADP + phosphate + L-arabinose[side 2] + [arabinose-binding protein][side 1]
(2)
Q4J711; Q4J710
ATP + H2O + L-arabinose-[arabinose-binding protein][side 1] = ADP + phosphate + L-arabinose[side 2] + [arabinose-binding protein][side 1]
-
-
-
-
ATP + H2O + L-arabinose-[arabinose-binding protein][side 1] = ADP + phosphate + L-arabinose[side 2] + [arabinose-binding protein][side 1]
(2)
-
-
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SYSTEMATIC NAME
IUBMB Comments
ATP phosphohydrolase (ABC-type, D-xylose/L-arabinose-importing)
ATP-binding cassette (ABC) type transporter with a 10-transmembrane-spanning (TMD) subunit and a single nucleotide binding domain. The enzyme from the archaeon Sulfolobus acidocaldarius interacts with an extracytoplasmic sugar-binding protein and mediates the uptake of of D-xylose and L-arabinose (cf. EC 7.5.2.10, ABC-type D-xylose transporter and EC 7.5.2.12, ABC-type L-arabinose transporter).
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SUBSTRATE
PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
LITERATURE
COMMENTARY
Reversibility
r=reversible
ir=irreversible
?=not specified
r=reversible
ir=irreversible
?=not specified
ATP + H2O + D-xylose-[D-xylose/L-arabinose-binding protein Saci_2122][side 1]
ADP + phosphate + D-xylose[side 2] + [D-xylose/L-arabinose-binding protein Saci_2122][side 1]
ATP + H2O + D-xylose-[substrate-binding protein xacG][side 1]
ADP + phosphate + D-xylose[side 2] + [substrate-binding protein xacG][side 1]
ATP + H2O + D-xylose-[xylose-binding protein][side 1]
ADP + phosphate + D-xylose[side 2] + [xylose-binding protein][side 1]
ATP + H2O + D-xylose-[xylose-binding protein][side1]
ADP + phosphate + D-xylose[side2] + [xylose-binding protein][side1]
ATP + H2O + L-arabinose-[arabinose-binding protein][side 1]
ADP + phosphate + L-arabinose[side 2] + [arabinose-binding protein][side 1]
ATP + H2O + L-arabinose-[arabinose-binding protein][side1]
ADP + phosphate + L-arabinose[side2] + [arabinose-binding protein][side1]
ATP + H2O + L-arabinose-[substrate-binding protein xacG][side 1]
ADP + phosphate + L-arabinose[side 2] + [substrate-binding protein xacG][side 1]
additional information
?
-
Substrates: the enzyme does not transport hexoses
Products: -
Products: -
?
ATP + H2O + D-xylose-[D-xylose/L-arabinose-binding protein Saci_2122][side 1]
ADP + phosphate + D-xylose[side 2] + [D-xylose/L-arabinose-binding protein Saci_2122][side 1]
Q4J711; Q4J710
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[D-xylose/L-arabinose-binding protein Saci_2122][side 1]
ADP + phosphate + D-xylose[side 2] + [D-xylose/L-arabinose-binding protein Saci_2122][side 1]
Q4J711; Q4J710
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[substrate-binding protein xacG][side 1]
ADP + phosphate + D-xylose[side 2] + [substrate-binding protein xacG][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[substrate-binding protein xacG][side 1]
ADP + phosphate + D-xylose[side 2] + [substrate-binding protein xacG][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[xylose-binding protein][side 1]
ADP + phosphate + D-xylose[side 2] + [xylose-binding protein][side 1]
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[xylose-binding protein][side 1]
ADP + phosphate + D-xylose[side 2] + [xylose-binding protein][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[xylose-binding protein][side 1]
ADP + phosphate + D-xylose[side 2] + [xylose-binding protein][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[xylose-binding protein][side1]
ADP + phosphate + D-xylose[side2] + [xylose-binding protein][side1]
Q4J711; Q4J710
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[xylose-binding protein][side1]
ADP + phosphate + D-xylose[side2] + [xylose-binding protein][side1]
Q4J711; Q4J710
Substrates: ABC substrate-binding protein, locus name saci_2122
Products: -
Products: -
?
ATP + H2O + D-xylose-[xylose-binding protein][side1]
ADP + phosphate + D-xylose[side2] + [xylose-binding protein][side1]
Q4J711; Q4J710
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[xylose-binding protein][side1]
ADP + phosphate + D-xylose[side2] + [xylose-binding protein][side1]
Q4J711; Q4J710
Substrates: ABC substrate-binding protein, locus name saci_2122
Products: -
Products: -
?
ATP + H2O + L-arabinose-[arabinose-binding protein][side 1]
ADP + phosphate + L-arabinose[side 2] + [arabinose-binding protein][side 1]
Substrates: highest activity
Products: -
Products: -
?
ATP + H2O + L-arabinose-[arabinose-binding protein][side 1]
ADP + phosphate + L-arabinose[side 2] + [arabinose-binding protein][side 1]
Substrates: highest activity with L-arabinose
Products: -
Products: -
?
ATP + H2O + L-arabinose-[arabinose-binding protein][side 1]
ADP + phosphate + L-arabinose[side 2] + [arabinose-binding protein][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + L-arabinose-[arabinose-binding protein][side 1]
ADP + phosphate + L-arabinose[side 2] + [arabinose-binding protein][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + L-arabinose-[arabinose-binding protein][side1]
ADP + phosphate + L-arabinose[side2] + [arabinose-binding protein][side1]
Q4J711; Q4J710
Substrates: -
Products: -
Products: -
?
ATP + H2O + L-arabinose-[arabinose-binding protein][side1]
ADP + phosphate + L-arabinose[side2] + [arabinose-binding protein][side1]
Q4J711; Q4J710
Substrates: ABC substrate-binding protein, locus name saci_2122
Products: -
Products: -
?
ATP + H2O + L-arabinose-[arabinose-binding protein][side1]
ADP + phosphate + L-arabinose[side2] + [arabinose-binding protein][side1]
Q4J711; Q4J710
Substrates: -
Products: -
Products: -
?
ATP + H2O + L-arabinose-[arabinose-binding protein][side1]
ADP + phosphate + L-arabinose[side2] + [arabinose-binding protein][side1]
Q4J711; Q4J710
Substrates: ABC substrate-binding protein, locus name saci_2122
Products: -
Products: -
?
ATP + H2O + L-arabinose-[substrate-binding protein xacG][side 1]
ADP + phosphate + L-arabinose[side 2] + [substrate-binding protein xacG][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + L-arabinose-[substrate-binding protein xacG][side 1]
ADP + phosphate + L-arabinose[side 2] + [substrate-binding protein xacG][side 1]
-
Substrates: -
Products: -
Products: -
?
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NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
LITERATURE
COMMENTARY
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
r=reversible
ir=irreversible
?=not specified
ATP + H2O + D-xylose-[D-xylose/L-arabinose-binding protein Saci_2122][side 1]
ADP + phosphate + D-xylose[side 2] + [D-xylose/L-arabinose-binding protein Saci_2122][side 1]
ATP + H2O + D-xylose-[substrate-binding protein xacG][side 1]
ADP + phosphate + D-xylose[side 2] + [substrate-binding protein xacG][side 1]
ATP + H2O + D-xylose-[xylose-binding protein][side 1]
ADP + phosphate + D-xylose[side 2] + [xylose-binding protein][side 1]
ATP + H2O + D-xylose-[xylose-binding protein][side1]
ADP + phosphate + D-xylose[side2] + [xylose-binding protein][side1]
ATP + H2O + L-arabinose-[arabinose-binding protein][side 1]
ADP + phosphate + L-arabinose[side 2] + [arabinose-binding protein][side 1]
ATP + H2O + L-arabinose-[arabinose-binding protein][side1]
ADP + phosphate + L-arabinose[side2] + [arabinose-binding protein][side1]
ATP + H2O + L-arabinose-[substrate-binding protein xacG][side 1]
ADP + phosphate + L-arabinose[side 2] + [substrate-binding protein xacG][side 1]
ATP + H2O + D-xylose-[D-xylose/L-arabinose-binding protein Saci_2122][side 1]
ADP + phosphate + D-xylose[side 2] + [D-xylose/L-arabinose-binding protein Saci_2122][side 1]
Q4J711; Q4J710
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[D-xylose/L-arabinose-binding protein Saci_2122][side 1]
ADP + phosphate + D-xylose[side 2] + [D-xylose/L-arabinose-binding protein Saci_2122][side 1]
Q4J711; Q4J710
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[substrate-binding protein xacG][side 1]
ADP + phosphate + D-xylose[side 2] + [substrate-binding protein xacG][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[substrate-binding protein xacG][side 1]
ADP + phosphate + D-xylose[side 2] + [substrate-binding protein xacG][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[xylose-binding protein][side 1]
ADP + phosphate + D-xylose[side 2] + [xylose-binding protein][side 1]
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[xylose-binding protein][side 1]
ADP + phosphate + D-xylose[side 2] + [xylose-binding protein][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[xylose-binding protein][side 1]
ADP + phosphate + D-xylose[side 2] + [xylose-binding protein][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[xylose-binding protein][side1]
ADP + phosphate + D-xylose[side2] + [xylose-binding protein][side1]
Q4J711; Q4J710
Substrates: -
Products: -
Products: -
?
ATP + H2O + D-xylose-[xylose-binding protein][side1]
ADP + phosphate + D-xylose[side2] + [xylose-binding protein][side1]
Q4J711; Q4J710
Substrates: -
Products: -
Products: -
?
ATP + H2O + L-arabinose-[arabinose-binding protein][side 1]
ADP + phosphate + L-arabinose[side 2] + [arabinose-binding protein][side 1]
Substrates: highest activity
Products: -
Products: -
?
ATP + H2O + L-arabinose-[arabinose-binding protein][side 1]
ADP + phosphate + L-arabinose[side 2] + [arabinose-binding protein][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + L-arabinose-[arabinose-binding protein][side 1]
ADP + phosphate + L-arabinose[side 2] + [arabinose-binding protein][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + L-arabinose-[arabinose-binding protein][side1]
ADP + phosphate + L-arabinose[side2] + [arabinose-binding protein][side1]
Q4J711; Q4J710
Substrates: -
Products: -
Products: -
?
ATP + H2O + L-arabinose-[arabinose-binding protein][side1]
ADP + phosphate + L-arabinose[side2] + [arabinose-binding protein][side1]
Q4J711; Q4J710
Substrates: -
Products: -
Products: -
?
ATP + H2O + L-arabinose-[substrate-binding protein xacG][side 1]
ADP + phosphate + L-arabinose[side 2] + [substrate-binding protein xacG][side 1]
-
Substrates: -
Products: -
Products: -
?
ATP + H2O + L-arabinose-[substrate-binding protein xacG][side 1]
ADP + phosphate + L-arabinose[side 2] + [substrate-binding protein xacG][side 1]
-
Substrates: -
Products: -
Products: -
?
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INHIBITOR
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
IMAGE
carbonyl cyanide m-chlorophenyl-hydrazone
i.e. CCCP, 7% residual activity at 0.05 mM
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pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
Q4J711: ABC-type transmembrane domain (saci_2121), Q4J710: ABC-type substrate binding protein (saci_2122), saci_2120: ABC-type nucleotide binding domain, putative ATPase. saci_2120 is cotranscribed with saci_2122 and saci_2121 as a single mRNA; strain MW001 is a pyrE deletion mutant of Sulfolubus acidocaldarius wild type strain DSM 639 missing 322 bp
Q4J711; Q4J710
UniProt
brenda
Q4J711: ABC-type transmembrane domain (saci_2121), Q4J710: ABC-type substrate binding protein (saci_2122), saci_2120: ABC-type nucleotide binding domain, putative ATPase. saci_2120 is cotranscribed with saci_2122 and saci_2121 as a single mRNA; strain MW001 is a pyrE deletion mutant of Sulfolubus acidocaldarius wild type strain DSM 639 missing 322 bp
Q4J711; Q4J710
UniProt
brenda
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
Highest Expressing Human Cell Lines
Cell Line LinksPlease wait a moment until the data is sorted. This message will disappear when the data is sorted.
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
physiological function
physiological function
Q4J711; Q4J710
the ABC transporter consists of the substrate binding protein (Saci_2122 XylF), the ABC transporter-associated transmembrane domain (Saci_2121 XylH), and the nucleotide binding domain (Saci_2120 XylG) and transports D-xylose and L-arabinose into the cell. Single-gene deletion of the ABC transporter subunits results in a growth defect on D-xylose and L-arabinose
physiological function
the enzyme contributes to the uptake and recycling of cell wall sugars
physiological function
-
the ABC transporter consists of the substrate binding protein (Saci_2122 XylF), the ABC transporter-associated transmembrane domain (Saci_2121 XylH), and the nucleotide binding domain (Saci_2120 XylG) and transports D-xylose and L-arabinose into the cell. Single-gene deletion of the ABC transporter subunits results in a growth defect on D-xylose and L-arabinose
-
Show AA Sequence and Transmembrane Helices (1753 entries)
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Please use the AA Sequence and Transmembrane Helices Search for a specific query.
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MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
46000
Q4J711; Q4J710
ABC-type substrate binding protein (saci_2122), SDS-PAGE
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SUBUNIT
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
homodimer
homodimer
Q4J711; Q4J710
the ABC transporter can be classified according to the Transporter Classification Database to the carbohydrate uptake transporter-2 (CUT2) family with a 10-transmembrane-spanning TMD subunit and only a single nucleotide binding domain, probably forming a homodimer
homodimer
-
the ABC transporter can be classified according to the Transporter Classification Database to the carbohydrate uptake transporter-2 (CUT2) family with a 10-transmembrane-spanning TMD subunit and only a single nucleotide binding domain, probably forming a homodimer
-
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CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in the hexose transport- and invertase-deficient Saccharomyces cerevisiae strain CSY4000
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EXPRESSION
ORGANISM
UNIPROT
LITERATURE
comparison of the transcriptome of Sulfolobus acidocaldarius MW001 grown on peptides alone and peptides in the presence of D-xylose allows the identification of the ABC transporter for D-xylose and L-arabinose transport. More than 10fold transcriptional upregulation is observed for the genes saci_2122 (ABC-type substrate binding protein), saci_2121 (ABC-type transmembrane domain). saci_2120 transcripts (ABC-type nucleotide binding domain) are 8.97fold upregulated in cells growing in the presence of D-xylose. ABC substrate-binding protein (saci_2122) transcripts are highly upregulated in the same range when cells are grown in the presence of all tested pentoses, i.e., D-arabinose, L-arabinose, and D-xylose, but are not induced by the other tested sugars. Transcription of the entire ABC transport system is responsive to pentoses but not to hexoses (D-glucose), disaccharides (sucrose), or polysaccharides (dextrin)
the enzyme is upregulated by both D-xylose and D-arabinose mediated by the transcriptional regulator XacR
the xacGHIJK cluster is transcriptionally upregulated by D-xylose and L-arabinose. XacR acts as activator of the enzyme genes
comparison of the transcriptome of Sulfolobus acidocaldarius MW001 grown on peptides alone and peptides in the presence of D-xylose allows the identification of the ABC transporter for D-xylose and L-arabinose transport. More than 10fold transcriptional upregulation is observed for the genes saci_2122 (ABC-type substrate binding protein), saci_2121 (ABC-type transmembrane domain). saci_2120 transcripts (ABC-type nucleotide binding domain) are 8.97fold upregulated in cells growing in the presence of D-xylose. ABC substrate-binding protein (saci_2122) transcripts are highly upregulated in the same range when cells are grown in the presence of all tested pentoses, i.e., D-arabinose, L-arabinose, and D-xylose, but are not induced by the other tested sugars. Transcription of the entire ABC transport system is responsive to pentoses but not to hexoses (D-glucose), disaccharides (sucrose), or polysaccharides (dextrin)
Q4J711; Q4J710
comparison of the transcriptome of Sulfolobus acidocaldarius MW001 grown on peptides alone and peptides in the presence of D-xylose allows the identification of the ABC transporter for D-xylose and L-arabinose transport. More than 10fold transcriptional upregulation is observed for the genes saci_2122 (ABC-type substrate binding protein), saci_2121 (ABC-type transmembrane domain). saci_2120 transcripts (ABC-type nucleotide binding domain) are 8.97fold upregulated in cells growing in the presence of D-xylose. ABC substrate-binding protein (saci_2122) transcripts are highly upregulated in the same range when cells are grown in the presence of all tested pentoses, i.e., D-arabinose, L-arabinose, and D-xylose, but are not induced by the other tested sugars. Transcription of the entire ABC transport system is responsive to pentoses but not to hexoses (D-glucose), disaccharides (sucrose), or polysaccharides (dextrin)
-
-
the enzyme is upregulated by both D-xylose and D-arabinose mediated by the transcriptional regulator XacR
-
the enzyme is upregulated by both D-xylose and D-arabinose mediated by the transcriptional regulator XacR
-
-
the xacGHIJK cluster is transcriptionally upregulated by D-xylose and L-arabinose. XacR acts as activator of the enzyme genes
-
the xacGHIJK cluster is transcriptionally upregulated by D-xylose and L-arabinose. XacR acts as activator of the enzyme genes
-
-
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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Wagner, M.; Shen, L.; Albersmeier, A.; van der Kolk, N.; Kim, S.; Cha, J.; Brsen, C.; Kalinowski, J.; Siebers, B.; Albers, S.V.
Sulfolobus acidocaldarius transports pentoses via a carbohydrate uptake transporter 2 (CUT2)-type ABC transporter and metabolizes them through the aldolase-independent Weimberg pathway
Appl. Environ. Microbiol.
84
e01273-17
2018
Sulfolobus acidocaldarius, Sulfolobus acidocaldarius (Q4J711 AND Q4J710), Sulfolobus acidocaldarius MW001, Sulfolobus acidocaldarius MW001 (Q4J711 AND Q4J710)
brenda
Johnsen, U.; Ortjohann, M.; Sutter, J.M.; Geweke, S.; Schoenheit, P.
Uptake of D-xylose and L-arabinose in Haloferax volcanii involves an ABC transporter of the CUT1 subfamily
FEMS Microbiol. Lett.
366
fnz089
2019
Haloferax volcanii, Haloferax volcanii H26
brenda
Rottmann, T.; Klebl, F.; Schneider, S.; Kischka, D.; Rscher, D.; Sauer, N.; Stadler, R.
Sugar transporter STP7 specificity for L-arabinose and D-xylose contrasts with the typical hexose transporters STP8 and STP12
Plant Physiol.
176
2330-2350
2018
Arabidopsis thaliana (O04249)
brenda
EXTERNAL LINKS (specific for EC-Number 7.5.2.13)
Transporter Classification Database (TCDB): 3.A.1.1.56
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Release 2026.1 (March 2026)
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