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ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
ATP + L-cysteine + tRNACys
-
-
-
-
r
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
ATP + L-cysteine + tRNACys mutant
AMP + diphosphate + L-cysteinyl-tRNACys mutant
-
tRNA substrate is a tRNACys with mutation at the core tertiary Levitt pair from wild-type G15.C48 to mutant G15.G48, leading to a higher activity
-
?
ATP + L-cysteine + tRNACysA36G
AMP + diphosphate + L-cysteinyl-tRNACysA36G
-
relative activity compared to wild-type tRNACys as a substrate: 0.01
-
-
?
ATP + L-cysteine + tRNACysC35U
AMP + diphosphate + L-cysteinyl-tRNACysC35U
-
relative activity compared to wild-type tRNACys as a substrate: 0.005
-
-
?
ATP + L-cysteine + tRNACysG15C/C48G
AMP + diphosphate + L-cysteinyl-tRNACysG15C/C48G
-
relative activity compared to wild-type tRNACys as a substrate: 0.03
-
-
?
ATP + L-cysteine + tRNACysG34C
AMP + diphosphate + L-cysteinyl-tRNACysG34C
-
relative activity compared to wild-type tRNACys as a substrate: 0.001
-
-
?
ATP + L-cysteine + tRNACysU73G
AMP + diphosphate + L-cysteinyl-tRNACysU73G
-
relative activity compared to wild-type tRNACys as a substrate: 0.00002
-
-
?
ATP + L-cysteine + tRNAGln duoble-mutant
AMP + diphosphate + L-cysteinyl-tRNAGln double-mutant
-
tRNA substrate is a tRNAGln with introduced tRNACys indentitiy nucleotides at the acceptor and anticodon ends and a core tertiary Levitt pair equivalent to tRNAGln of G15.G48, poor activity
-
?
ATP + L-cysteine + tRNAGln mutant
AMP + diphosphate + L-cysteinyl-tRNAGln mutant
-
tRNA substrate is a tRNAGln with introduced tRNACys indentitiy nucleotides at the acceptor and anticodon ends and a core tertiary Levitt pair equivalent to tRNACys of G15.C48
-
?
L-Cysteinyl-tRNACys
Cysteine thiolactone + ?
-
deacylation in which nucleophilic sulfur of the side chain of cysteine in Cys-tRNACys attacks its carboxyl carbon, synthesis of Cys-tRNACys and cyclization of cysteine to thiolactone occur in a single active site
-
?
additional information
?
-
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
-
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
enzyme is highly specific for L-cysteine and does not possess the editing activity characteristic for other tRNA synthetases
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
the enzyme is rate-limited by release of aminoacyl-tRNA
-
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
-
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
-
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
-
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
-
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
-
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
-
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
-
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
-
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
-
-
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
tRNACys mutants: greatest loss of activity caused by mutation of a single nucleotide, occurs when the discriminator U73 is changed, mutations in the wobble nucleotide of the anticodon also cause reductions in the specificity constant of 3 orders of magnitude, while mutations in the other anticodon nucleotides causes lesser effects
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
enzyme is highly specific for L-cysteine without performing an editing reaction, tightly bound zinc is the primary determinant of selectivity against non-cognate amino acids
-
?
ATP + L-cysteine + tRNACys
AMP + diphosphate + L-cysteinyl-tRNACys
-
the attachment of cysteine to tRNACys by the class I cysteinyl-tRNA synthetase is flexible. The enzyme is capable of using either the 2' or 3'-hydroxyl group as the attachment site
-
-
?
additional information
?
-
-
selenocysteine can replace cysteine in ATP-diphosphate exchange
-
-
?
additional information
?
-
-
alanine shows minor activity in ATP-diphosphate exchange
-
-
?
additional information
?
-
-
2-aminobutyric acid can replace cysteine in ATP-diphosphate exchange
-
-
?
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additional information
additional information
-
0.00047
L-cysteine
mutant enzyme M294A, pH and temperature not specified in the publication
0.00052
L-cysteine
mutant enzyme E354Q, pH and temperature not specified in the publication
0.00055
L-cysteine
mutant enzyme H297A, pH and temperature not specified in the publication
0.00066
L-cysteine
mutant enzyme M294A/H297A, pH and temperature not specified in the publication
0.0012
L-cysteine
wild type enzyme, pH and temperature not specified in the publication
0.0018
L-cysteine
mutant enzyme R42A, pH and temperature not specified in the publication
0.002
L-cysteine
mutant enzyme H40A, pH and temperature not specified in the publication
0.0075
L-cysteine
mutant enzyme R427A, pH and temperature not specified in the publication
0.0076
L-cysteine
mutant enzyme M294A/R427A, pH and temperature not specified in the publication
0.01
L-cysteine
mutant enzyme E354Q/R427A, pH and temperature not specified in the publication
2.4
L-cysteine
mutant enzyme H40A/R42A, pH and temperature not specified in the publication
0.0005
tRNACys
mutant enzyme E354A, wild-type tRNACys(G15-G48)
0.00058
tRNACys
mutant enzyme E354Q, wild-type tRNACys(G15-G48)
0.00116
tRNACys
wild-type enzyme, wild-type tRNACys(G15-G48)
0.0088
tRNACys
mutant enzyme N351A, wild-type tRNACys(G15-G48)
0.0177
tRNACys
mutant enzyme N351D, mutant tRNACys(G15-C48)
0.0179
tRNACys
mutant enzyme E354Q, wild-type tRNACys(G15-G48)
0.0185
tRNACys
mutant enzyme N351D, wild-type tRNACys(G15-G48)
0.0332
tRNACys
mutant enzyme N351A, mutant tRNACys(G15-C48)
0.0358
tRNACys
wild-type enzyme, mutant tRNACys(G15-C48)
0.0435
tRNACys
mutant enzyme E354A, mutant tRNACys(G15-C48)
0.22
ATP
-
ATP-diphosphate exchange reaction, recombinant His-tagged Co2+-wild-type enzyme
0.25
ATP
-
ATP-diphosphate exchange reaction, recombinant His-tagged Zn2+-wild-type enzyme
0.25
ATP
-
pH 8.0, wild-type enzyme, ATP-diphosphate exchange
0.29
ATP
-
ATP-diphosphate exchange reaction, recombinant Zn2+-wild-type enzyme
0.31
ATP
-
pH 8.0, mutant enzyme DELTA288-461, ATP-diphosphate exchange
0.338
ATP
-
30°C, pH 7.0, wild-type enzyme
0.412
ATP
-
30°C, pH 7.0, mutant enzyme V27E
0.77
ATP
-
ATP-diphosphate exchange reaction, recombinant W205Y mutant enzyme
1.18
ATP
-
pH 8.0, mutant enzyme DELTA328-461, ATP-diphosphate exchange
0.0072
L-cysteine
-
30°C, pH 7.0, wild-type enzyme
0.022
L-cysteine
-
ATP-diphosphate exchange reaction, recombinant Zn2+-wild-type enzyme
0.0282
L-cysteine
-
30°C, pH 7.0, mutant enzyme V27E
0.029
L-cysteine
-
ATP-diphosphate exchange reaction, recombinant His-tagged Co2+-wild-type enzyme
0.031
L-cysteine
-
ATP-diphosphate exchange reaction, recombinant His-tagged Zn2+-wild-type enzyme
3.61
L-cysteine
-
ATP-diphosphate exchange reaction, recombinant W205Y mutant enzyme
0.00035
tRNACys
-
aminoacylation reaction, recombinant Zn2+-wild-type enzyme
0.0004
tRNACys
-
aminoacylation reaction, recombinant His-tagged Co2+-wild-type enzyme
0.00064
tRNACys
-
30°C, pH 7.0, wild-type enzyme
0.00092
tRNACys
-
30°C, pH 7.0, mutant enzyme V27E
0.00116
tRNACys
-
37°C, wild-type enzyme
0.0012
tRNACys
-
aminoacylation reaction, recombinant His-tagged Zn2+-wild-type enzyme
0.0015
tRNACys
-
pH 7.0, 37°C
0.0066
tRNACys
-
aminoacylation reaction, recombinant W205Y mutant enzyme
0.095
tRNACys
-
aminoacylation reaction, recombinant C28S/C209S mutant enzyme
additional information
additional information
thermodynamics, single turnover and burst kinetics of CysRS, steady-state and transient kinetic analyses of class I CysRS, the enzyme is rate-limited by release of aminoacyl-tRNA, recombinant His-tagged enzyme, overview
-
additional information
additional information
-
Km-values of mutant tRNA molecules
-
additional information
additional information
-
tRNAGln mutant substrates
-
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0.017
L-Cysteinyl-tRNACys
-
-
additional information
additional information
-
0.001
L-cysteine
mutant enzyme H40A/R42A, pH and temperature not specified in the publication
0.0093
L-cysteine
mutant enzyme H40A, pH and temperature not specified in the publication
0.02
L-cysteine
mutant enzyme M294A/R427A, pH and temperature not specified in the publication
0.027
L-cysteine
mutant enzyme R427A, pH and temperature not specified in the publication
0.082
L-cysteine
mutant enzyme E354Q, pH and temperature not specified in the publication
0.088
L-cysteine
mutant enzyme M294A/H297A, pH and temperature not specified in the publication
0.14
L-cysteine
mutant enzyme M294A, pH and temperature not specified in the publication
0.16
L-cysteine
mutant enzyme H297A, pH and temperature not specified in the publication
0.49
L-cysteine
mutant enzyme E354Q/R427A, pH and temperature not specified in the publication
1.1
L-cysteine
mutant enzyme R42A, pH and temperature not specified in the publication
1.2
L-cysteine
wild type enzyme, pH and temperature not specified in the publication
2.5
L-cysteine
steady-state
0.03
tRNACys
mutant enzyme N351D, mutant tRNACys(G15-C48)
0.036
tRNACys
mutant enzyme E354A, mutant tRNACys(G15-C48)
0.074
tRNACys
mutant enzyme E354Q, mutant tRNACys(G15-C48)
0.094
tRNACys
mutant enzyme N351D, wild-type tRNACys(G15-G48)
0.1
tRNACys
mutant enzyme E354A, wild-type tRNACys(G15-G48)
0.14
tRNACys
mutant enzyme E354Q, wild-type tRNACys(G15-G48)
0.39
tRNACys
mutant enzyme N351A, mutant tRNACys(G15-C48)
0.45
tRNACys
wild-type enzyme, mutant tRNACys(G15-C48)
0.59
tRNACys
mutant enzyme N351A, wild-type tRNACys(G15-G48)
2.46
tRNACys
wild-type enzyme, wild-type tRNACys(G15-G48)
0.3
ATP
-
ATP-diphosphate exchange reaction, recombinant W205Y mutant enzyme
0.34
ATP
-
pH 8.0, mutant enzyme DELTA328-461, ATP-diphosphate exchange
0.48
ATP
-
30°C, pH 7.0, mutant enzyme V27E
2
ATP
-
pH 8.0, mutant enzyme DELTA288-461, ATP-diphosphate exchange
4.4
ATP
-
30°C, pH 7.0, wild-type enzyme
22.6
ATP
-
pH 8.0, wild-type enzyme, ATP-diphosphate exchange
57
ATP
-
ATP-diphosphate exchange reaction, recombinant His-tagged Co2+-wild-type enzyme
91
ATP
-
ATP-diphosphate exchange reaction, recombinant Zn2+-wild-type enzyme
142
ATP
-
ATP-diphosphate exchange reaction, recombinant His-tagged Zn2+-wild-type enzyme
0.28
L-cysteine
-
ATP-diphosphate exchange reaction, recombinant W205Y mutant enzyme
0.86
L-cysteine
-
30°C, pH 7.0, mutant enzyme V27E
4.8
L-cysteine
-
30°C, pH 7.0, wild-type enzyme
35
L-cysteine
-
ATP-diphosphate exchange reaction, recombinant His-tagged Co2+-wild-type enzyme
79
L-cysteine
-
ATP-diphosphate exchange reaction, recombinant Zn2+-wild-type enzyme
100
L-cysteine
-
ATP-diphosphate exchange reaction, recombinant His-tagged Zn2+-wild-type enzyme
0.005
tRNACys
-
aminoacylation reaction, recombinant C28S/C209S mutant enzyme
0.007
tRNACys
-
aminoacylation reaction, recombinant W205Y mutant enzyme
0.5
tRNACys
-
aminoacylation reaction, recombinant His-tagged Co2+-wild-type enzyme
0.68
tRNACys
-
30°C, pH 7.0, mutant enzyme V27E
0.9
tRNACys
-
aminoacylation reaction, recombinant Zn2+-wild-type enzyme
2.46
tRNACys
-
37°C, wild-type enzyme
2.5
tRNACys
-
aminoacylation reaction, recombinant His-tagged Zn2+-wild-type enzyme
2.9
tRNACys
-
30°C, pH 7.0, wild-type enzyme
3 - 6
tRNACys
-
pH 7.0, 37°C
3.47
tRNACys
-
pH 7.0, 37°C
additional information
additional information
-
turnover numbers of mutant tRNA molecules
-
additional information
additional information
-
tRNAGln mutant substrates
-
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E354Q
the mutant has decreased kcat and Km values leading to an overall decrease in kcat/Km by 6.8fold relative to the wild type enzyme
E354Q/R427A
the mutant has a decreased kcat and an increased Km leading to an overall decrease in kcat/Km by 22fold relative to the wild type enzyme
H297A
the mutant has a decreased kcat and Km values leading to an overall decrease in kcat/Km by 3.4fold relative to the wild type enzyme
H404A/R42A
the mutant has a decreased kcat and an increased Km leading to an overall decrease in kcat/Km by 209fold relative to the wild type enzyme
H40A
the mutant has a decreased kcat and an increased Km leading to an overall decrease in kcat/Km by 204fold relative to the wild type enzyme
M294A
the mutant has decreased kcat and Km values leading to an overall decrease in kcat/Km by 3.7fold relative to the wild type enzyme
M294A/H297A
the mutant has a decreased kcat and Km values leading to an overall decrease in kcat/Km by 8.1fold relative to the wild type enzyme
M294A/R427A
the mutant has a decreased kcat and an increased Km leading to an overall decrease in kcat/Km by 370fold relative to the wild type enzyme
R427A
the mutant has a decreased kcat and an increased Km leading to an overall decrease in kcat/Km by 291fold relative to the wild type enzyme
R42A
the mutant has a decreased kcat and an increased Km leading to an overall decrease in kcat/Km by 1.5fold relative to the wild type enzyme
C209S
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 0.0031% of the wild-type ratio
C28S
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 0.012% of the wild-type ratio
C36S/C214S/C244S
-
site-directed mutagenesis, activity is similar to the wild-type enzyme, but the affinity for cysteine binding is increased
DELTA288-461
-
the ratio of turnover number to Km-value for ATP in ATP-diphosphate exchange is 7% of the wild-type ratio
DELTA328-461
-
the ratio of turnover number to Km-value for ATP in ATP-diphosphate exchange is 0.32% of the wild-type ratio, aminoacylation of tRNACys is not detectable
E354Q
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 10% of the wild-type ratio
H206S
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 60% of the wild-type ratio
H224N/H235N
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 0.042% of the wild-type ratio
H224S
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 5.7% of the wild-type ratio
H234N/E238Q
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 0.0059% of the wild-type ratio
H234N/E238Q/H224N/H235N
-
aminoacylation of tRNACys is not detectable
H234S
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 0.015% of the wild-type ratio
H235S
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 0.38% of the wild-type ratio
H238S
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 30% of the wild-type ratio
H256S
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 10% of the wild-type ratio
N351D
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 0.25% of the wild-type ratio
V27E
-
mutation does not affect the discrimination of the enzyme for serine. 4fold increase in Km-value for cysteine and 9fold reduction of turnover number for ATP
W205F
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 0.55% of the wild-type ratio
W205Y
-
site-directed mutagenesis, highly reduced activity, highly increased Km for cysteine
C28S/C209S
-
site-directed mutagenesis, no ATP-diphosphate exchange activity, residual aminoacylation activity
C28S/C209S
-
the ratio of turnover number to Km-value of aminoacylation of tRNACys is 0.0026% of the wild-type ratio
C28S/C209S/H234N/E238Q
-
site-directed mutagensis, mutation of all zinc binding ligands, complete loss of bound zinc, weak ability to bind serine, thus loss of amino acid substrate discrimination ability
C28S/C209S/H234N/E238Q
-
aminoacylation of tRNACys is not detectable
additional information
-
construction of a Co2+-substituted wild-type enzyme, similar properties as the Zn2+-wild-type enzyme but slightly reduced activity
additional information
-
construction of a fusion of a eukaryote-specific domain of human CysRS enabling recognition of the sequence differences in the tertiary core of tRNACys. The fused eukaryotic domain redirects the specificity of Escherichia coli CysRS from the A37 present in bacterial tRNACys to the G37 in mammals
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Eriani, G.; Dirheimer, G.; Gangloff, J.
Cysteinyl-tRNA synthetase: determination of the last E. coli aminoacyl-tRNA synthetase primary structure
Nucleic Acids Res.
19
265-269
1991
Escherichia coli
brenda
Jakubowski, H.
Editing function of Escherichia coli cysteinyl-tRNA synthetase: cyclization of cysteine to cysteine thiolactone
Nucleic Acids Res.
22
1155-1160
1994
Escherichia coli
brenda
Komatsoulis, G.A.; Abelson, J.
Recognition of tRNACys by Escherichia coli cysteinyl-tRNA synthetase [published erratum appears in Biochemistry 1993 Dec 7;32(48):13374]
Biochemistry
32
7435-7444
1993
Escherichia coli
brenda
Bohman, K.; Isaksson, L.A.
Temperature-sensitive mutants in cysteinyl-tRNA ligase of E. coli K-12
Mol. Gen. Genet.
176
53-55
1979
Escherichia coli
brenda
Fersht, A.R.; Dingwall, C.
Cysteinyl-tRNA synthetase from Escherichia coli does not need an editing mechanism to reject serine and alanine. High binding energy of small groups in specific molecular interactions
Biochemistry
18
1245-1249
1979
Escherichia coli
brenda
McCorquodale, D.J.
The separation and partial purification of aminoacyl-RNA synthetases from Escherichia coli
Biochim. Biophys. Acta
91
541-548
1964
Escherichia coli
brenda
Newberry, K.J.; Kohn, J.; Hou, Y.M.; Perona, J.J.
Crystallization and preliminary diffraction analysis of Escherichia coli cysteinyl-tRNA synthetase
Acta Crystallogr. Sect. D
55
1046-1047
1999
Escherichia coli
brenda
Newberry, K.J.; Hou, Y.M.; Perona, J.J.
Structural origins of amino acid selection without editing by cysteinyl-tRNA synthetase
EMBO J.
21
2778-2787
2002
Escherichia coli (P21888), Escherichia coli
brenda
Sherlin, L.D.; Bullock, T.L.; Newberry, K.J.; Lipman, R.S.; Hou, Y.M.; Beijer, B.; Sproat, B.S.; Perona, J.J.
Influence of transfer RNA tertiary structure on aminoacylation efficiency by glutaminyl and cysteinyl-tRNA synthetases
J. Mol. Biol.
299
431-446
2000
Escherichia coli
brenda
Zhang, C.M.; Christian, T.; Newberry, K.J.; Perona, J.J.; Hou, Y.M.
Zinc-mediated amino acid discrimination in cysteinyl-tRNA synthetase
J. Mol. Biol.
327
911-917
2003
Escherichia coli
brenda
Zhang, C.M.; Hou, Y.M.
Domain-domain communication for tRNA aminoacylation: the importance of covalent connectivity
Biochemistry
44
7240-7249
2005
Escherichia coli
brenda
Ruan, B.; Nakano, H.; Tanaka, M.; Mills, J.A.; DeVito, J.A.; Min, B.; Low, K.B.; Battista, J.R.; Soll, D.
Cysteinyl-tRNA(Cys) formation in Methanocaldococcus jannaschii: the mechanism is still unknown
J. Bacteriol.
186
8-14
2004
Escherichia coli
brenda
Shitivelband, S.; Hou, Y.M.
Breaking the stereo barrier of amino acid attachment to tRNA by a single nucleotide
J. Mol. Biol.
348
513-521
2005
Escherichia coli
brenda
Hauenstein, S.; Zhang, C.M.; Hou, Y.M.; Perona, J.J.
Shape-selective RNA recognition by cysteinyl-tRNA synthetase
Nat. Struct. Mol. Biol.
11
1134-1141
2004
Escherichia coli (P21888), Escherichia coli
brenda
Zhang, C.M.; Perona, J.J.; Ryu, K.; Francklyn, C.; Hou, Y.M.
Distinct kinetic mechanisms of the two classes of aminoacyl-tRNA synthetases
J. Mol. Biol.
361
300-311
2006
Escherichia coli (P21888)
brenda
Zhang, C.M.; Liu, C.; Slater, S.; Hou, Y.M.
Aminoacylation of tRNA with phosphoserine for synthesis of cysteinyl-tRNA(Cys)
Nat. Struct. Mol. Biol.
15
507-514
2008
Escherichia coli
brenda
Liu, C.; Gamper, H.; Liu, H.; Cooperman, B.S.; Hou, Y.M.
Potential for interdependent development of tRNA determinants for aminoacylation and ribosome decoding
Nat. Commun.
2
329
2011
Escherichia coli
brenda
Ghosh, A.; Sakaguchi, R.; Liu, C.; Vishveshwara, S.; Hou, Y.M.
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