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Information on EC 5.5.1.4 - inositol-3-phosphate synthase and Organism(s) Oryza sativa and UniProt Accession O64437

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IUBMB Comments
Requires NAD+, which dehydrogenates the -CHOH- group to -CO- at C-5 of the glucose 6-phosphate, making C-6 into an active methylene, able to condense with the -CHO at C-1. Finally, the enzyme-bound NADH reconverts C-5 into the -CHOH- form.
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This record set is specific for:
Oryza sativa
UNIPROT: O64437
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Word Map
The taxonomic range for the selected organisms is: Oryza sativa
The enzyme appears in selected viruses and cellular organisms
Synonyms
inps, myo-inositol-1-phosphate synthase, mips1, inositol-1-phosphate synthase, mip synthase, pip synthase, myo-inositol 1-phosphate synthase, inositol-3-phosphate synthase, l-myo-inositol-1-phosphate synthase, sll1981, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
L-myo-inositol 1-phosphate synthase
-
OsMIPS1-1
-
OsMIPS1-2
-
RINO1 protein
-
1D-myo-inositol 3-phosphate synthase
-
-
1L-myo-Inositol-1-phosphate synthase
-
-
-
-
D-Glucose 6-phosphate cycloaldolase
-
-
-
-
D-Glucose 6-phosphate-1L-myoinositol 1-phosphate cyclase
-
-
-
-
D-Glucose 6-phosphate-1L-myoinositol 1-phosphate cycloaldolase
-
-
-
-
D-Glucose 6-phosphate-L-myo-inositol 1-phosphate cyclase
-
-
-
-
D-Glucose-6-phosphate,L-myo-inositol-1-phosphate cycloaldolase
-
-
-
-
D-myo-inositol-3-phosphate synthase
-
Glucocycloaldolase
-
-
-
-
Glucose 6-phosphate cyclase
-
-
-
-
Glucose-6-phosphate inositol monophosphate cycloaldolase
-
-
-
-
INO1
-
-
Inositol 1-phosphate synthase
-
-
-
-
Inositol 1-phosphate synthetase
-
-
-
-
INPS1
-
-
-
-
IPS
-
-
-
-
L-myo-inositol 1-phosphate synthase
-
L-myo-Inositol 1-phosphate synthetase
-
-
-
-
L-myo-Inositol-1-phosphate synthase
-
-
-
-
MI-1-P synthase
-
-
-
-
MIP synthase
-
-
-
-
myo-inositol 3-phosphate synthase
-
-
myo-inositol phosphate synthase
-
-
myo-Inositol-1-P synthase
-
-
-
-
Myo-inositol-1-phosphate synthase
-
-
-
-
OsMIPS1
-
-
OsMIPS1-3
-
-
RINO1 protein
-
-
Synthase, myo-inositol 1-phosphate
-
-
-
-
[Ins(3)P1] synthase
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
cyclization
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
1D-myo-inositol-3-phosphate lyase (isomerizing)
Requires NAD+, which dehydrogenates the -CHOH- group to -CO- at C-5 of the glucose 6-phosphate, making C-6 into an active methylene, able to condense with the -CHO at C-1. Finally, the enzyme-bound NADH reconverts C-5 into the -CHOH- form.
CAS REGISTRY NUMBER
COMMENTARY hide
9032-95-5
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
D-glucose 6-phosphate
1D-myo-inositol 3-phosphate
show the reaction diagram
D-Glucose 6-phosphate
L-myo-Inositol 1-phosphate
show the reaction diagram
-
-
-
?
D-glucose 6-phosphate
1D-myo-inositol 3-phosphate
show the reaction diagram
D-Glucose 6-phosphate
L-myo-Inositol 1-phosphate
show the reaction diagram
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
D-glucose 6-phosphate
1D-myo-inositol 3-phosphate
show the reaction diagram
D-Glucose 6-phosphate
L-myo-Inositol 1-phosphate
show the reaction diagram
-
-
-
?
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
K+
-
stimulation of chloroplastic and cytosolic enzyme up to 2.5 mM
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
(NH4)2SO4
-
-
Cu2+
-
CuCl2
D-fructose 6-phosphate
-
-
D-galactose 6-phosphate
-
-
FeCl2
-
-
glucitol 6-phosphate
-
-
Inositol
-
4 mM
K+
-
5 mM, 10-15% inhibition
Li+
-
LiCl
mannitol
-
4 mM
NEM
-
0.5-2 mM
NH4HCO3
-
-
PbCl2
-
-
PCMB
-
0.5-2 mM
sorbitol
-
4 mM
Zn2+
-
ZnCl2
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
NH4+
-
10-14 mM NH4Cl, 5fold stimulation. Other NH4+ salts are strong inhibitors
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
1.97 - 3.19
D-glucose 6-phosphate
1.97 - 2.14
glucose 6-phosphate
0.08 - 0.14
NAD+
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
8 - 8.5
mutant bearing amino acids 174-210 of Porteresia coarctata enzyme
8.2
native enzyme
7.6
-
chloroplastic enzyme
8.2
-
cytosolic enzyme
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
35
native enzyme
35 - 37
-
-
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
SwissProt
Manually annotated by BRENDA team
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
isoenzyme OsMIPS1-2: low expression expression comparable to splice varian OsMIPS1
Manually annotated by BRENDA team
isoenzyme OsMIPS1-3: OsMIPS1-3 shows a more or less constitutive expression in different abiotic stresses in shoots, roots, panicle stages, and various developing seed stages
Manually annotated by BRENDA team
isoenzyme OsMIPS1-3: OsMIPS1-3 shows a more or less constitutive expression in different abiotic stresses in shoots, roots, panicle stages, and various developing seed stages
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
malfunction
-
seed-specific silencing of MIPS in transgenic rice plants leads to substantial reduction in levels of phytic acid along with an increase in phosphate content. Low phytate seeds have an undesirable diminution in levels of myo-inositol and ascorbate possibly leading to sensitiveness of seeds to abscisic acid during germination
physiological function
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
180000
native and recombinant enzyme, gel filtration
50360
isoenzyme OsMIPS1-2: amino acid sequence
53730
isoenzyme OsMIPS1-1: amino acid sequence
56020
isoenzyme OsMIPS2: amino acid sequence
60000
179000
-
cytosolic enzyme, gel filtration
253000
-
chloroplastic enzyme, gel filtration
44150
isoenzyme OsMIPS1-3: amino acid sequence
56260
isoenzyme OsMIPS1: amino acid sequence
59000
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
?
x * 60000, native and recombinant enzyme, SDS-PAGE
tetramer
-
4 * 59000, chloroplastic enzyme, SDS-PAGE
trimer
-
3 * 59000, cytosolic enzyme, SDS-PAGE
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
DELTAD342
the mutant shows 75% of wild type activity
DELTAD422
the mutant shows 73% of wild type activity
DELTAI386
the mutant shows 79% of wild type activity
DELTAK355/DELTAK359
the mutant shows 7% of wild type activity
DELTAK359
the mutant shows 59% of wild type activity
DELTAL346
the mutant shows 90% of wild type activity
DELTAV384
the mutant shows 59% of wild type activity
K355A/K359A
the mutant shows 14% of wild type activity
additional information
a 37-amino acid stretch between W174 and S210 is the salt-tolerance determinant domain of Porteresia coarctata enzyme. Introduction of this stretch into Oryza sativa enzyme provides salt tolerance properties
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
Superose12 gel filtration and DEAE Sephace gel filtration
DEAE Sephacel column chromatography
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Escherichia coli BL21(DE3) cells
EXPRESSION
ORGANISM
UNIPROT
LITERATURE
isoenzyme OsMIPS1-1: expression is largely responsive to abiotic stress in the root tissue, its expression is induced by drought, NaCl, cold, ABA, BR and SA
isoenzyme OsMIPS2: expression is considerably high in the unfertilized flower and during panicle development
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
RayChaudhuri, A.; Hait, N.C.; das Gupta, S.; Bhaduri, T.J.; Deb, R.; Majumder, A.L.
L-myo-Inositol 1-phosphate synthase from plant sources
Plant Physiol.
115
727-736
1997
Saccharomyces cerevisiae, Euglena gracilis, Oryza sativa, Vigna radiata, Arthrospira platensis
Manually annotated by BRENDA team
Majee, M.; Maitra, S.; Ghosh Dastidar, K.; Pattnaik, S.; Chatterjee, A.; Hait, N.C.; Das, K.P.; Majumder, A.L.
A novel salt-tolerant L-myo-inositol 1-phosphate synthase from Porteresia coarctata (Roxb.)Tateoka, a halophytic wild rice Molecular cloning, bacterial overexpression, characterization and functional introgression into tobacco conferring salt-tolerance phenotype
J. Biol. Chem.
279
28539-28552
2004
Oryza sativa (O64437), Oryza sativa, Oryza coarctata (Q7XZE6), Oryza coarctata
Manually annotated by BRENDA team
Ghosh Dastidar, K.; Maitra, S.; Goswami, L.; Roy, D.; Das, K.P.; Majumder, A.L.
An insight into the molecular basis of salt tolerance of L-myo-inositol 1-P synthase (PcINO1) from Porteresia coarctata (Roxb.) Tateoka, a halophytic wild rice
Plant Physiol.
140
1279-1296
2006
Oryza sativa (O64437), Oryza coarctata (Q7XZE6), Oryza coarctata
Manually annotated by BRENDA team
Kuwano, M.; Mimura, T.; Takaiwa, F.; Yoshida, K.T.
Generation of stable low phytic acid transgenic rice through antisense repression of the 1D-myo-inositol 3-phosphate synthase gene (RINO1) using the 18-kDa oleosin promoter
Plant Biotechnol. J.
7
96-105
2009
Oryza sativa
Manually annotated by BRENDA team
Abid, G.; Silue, S.; Muhovski, Y.; Jacquemin, J.M.; Toussaint, A.; Baudoin, J.P.
Role of myo-inositol phosphate synthase and sucrose synthase genes in plant seed development
Gene
439
1-10
2009
Arabidopsis thaliana, Archaeoglobus fulgidus, Brassica napus, Citrus x paradisi, Euglena gracilis, Glycine max, Hordeum vulgare, Mesembryanthemum crystallinum, Nicotiana tabacum, Oryza sativa, Perilla frutescens, Vigna radiata, Phaseolus vulgaris, Pisum sativum, Sesamum indicum, Solanum tuberosum, Zea mays
Manually annotated by BRENDA team
Ray, S.; Patra, B.; Das-Chatterjee, A.; Ganguli, A.; Majumder, A.L.
Identification and organization of chloroplastic and cytosolic L-myo-inositol 1-phosphate synthase coding gene(s) in Oryza sativa: comparison with the wild halophytic rice, Porteresia coarctata
Planta
231
1211-1227
2010
Oryza coarctata (B6V6K8), Oryza coarctata (B6V6K9), Oryza coarctata, Oryza sativa (O64437), Oryza sativa
Manually annotated by BRENDA team
Khurana, N.; Chauhan, H.; Khurana, P.
Expression analysis of a heat-inducible, myo-inositol-1-phosphate synthase (MIPS) gene from wheat and the alternatively spliced variants of rice and Arabidopsis
Plant Cell Rep.
31
237-251
2012
Arabidopsis thaliana, Arabidopsis thaliana (Q38862), Arabidopsis thaliana (Q9LX12), Oryza sativa, Oryza sativa (O64437), Triticum aestivum (G8HMZ0), Triticum aestivum (Q9S7U0), Triticum aestivum
Manually annotated by BRENDA team
Ali, N.; Paul, S.; Gayen, D.; Sarkar, S.N.; Datta, S.K.; Datta, K.
RNAi mediated down regulation of myo-inositol-3-phosphate synthase to generate low phytate rice
Rice (N.Y.)
6
12
2013
Oryza sativa
Manually annotated by BRENDA team
Kusuda, H.; Koga, W.; Kusano, M.; Oikawa, A.; Saito, K.; Hirai, M.Y.; Yoshida, K.T.
Ectopic expression of myo-inositol 3-phosphate synthase induces a wide range of metabolic changes and confers salt tolerance in rice
Plant Sci.
232
49-56
2015
Oryza sativa
Manually annotated by BRENDA team
Basak, P.; Maitra-Majee, S.; Das, J.K.; Mukherjee, A.; Ghosh Dastidar, S.; Pal Choudhury, P.; Lahiri Majumder, A.
An evolutionary analysis identifies a conserved pentapeptide stretch containing the two essential lysine residues for rice L-myo-inositol 1-phosphate synthase catalytic activity
PLoS ONE
12
e0185351
2017
Oryza sativa (Q8S5N2), Oryza sativa
Manually annotated by BRENDA team