Reference on EC 5.3.1.5 - xylose isomerase and Organism(s) Streptomyces rubiginosus and UniProt Accession P24300
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AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Carrell, H.L.; Rubin, B.H.; Hurley, T.J.; Glusker, J.P.
X-ray crystal structure of D-xylose isomerase at 4-A resolution
J. Biol. Chem.
259
3230-3236
1984
Streptomyces rubiginosus
Bhosale, S.H.; Rao, M.B.; Deshpande, V.V.
Molecular industrial aspects of glucose isomerase
Microbiol. Rev.
60
280-300
1996
Actinomyces olivocinereus, Actinoplanes missouriensis, Actinoplanes sp., Aerobacter levanicum, Aeromonas hydrophila, Arthrobacter sp., Bacillus licheniformis, Brevibacterium helvolum, Brevibacterium pentosoaminoacidicum, Citrobacter freundii, Citrobacter intermedius, Corynebacterium sp., Desemzia incerta, Enterobacter cloacae, Escherichia coli, Gordonia rubripertincta, Klebsiella aerogenes, Lactiplantibacillus pentosus, Lactiplantibacillus plantarum, Lactobacillus gayonii, Lactobacillus lycopersici, Lactobacillus mannitopoeus, Lentilactobacillus buchneri, Leuconostoc mesenteroides, Limosilactobacillus fermentum, Microbacterium arborescens, Microbispora rosea, Micromonospora coerulea, Mycobacterium sp., Nocardia asteroides, Nocardiopsis dassonvillei, Paracolobacterium aerogenoides, Priestia megaterium, Pseudonocardia sp., Sarcina sp., Sphingomonas paucimobilis, Streptococcus venuceus, Streptomyces achromogenes, Streptomyces bikiniensis, Streptomyces bobili, Streptomyces californicus, Streptomyces echinatus, Streptomyces flaveus, Streptomyces flavovirens, Streptomyces fradiae, Streptomyces glaucescens, Streptomyces griseofuscus, Streptomyces griseolus, Streptomyces griseus, Streptomyces matensis, Streptomyces nivens, Streptomyces olivaceus, Streptomyces olivochromogenes, Streptomyces phaeochromogenes, Streptomyces platensis, Streptomyces roseochromogenus, Streptomyces rubiginosus, Streptomyces venezuelae, Streptomyces virginiae, Streptomyces wedmorensis, Streptosporangium album, Streptosporangium vulgare, Thermoanaerobacter thermohydrosulfuricus, Thermoanaerobacterium thermosulfurigenes, Thermopolyspora sp., Thermus thermophilus, Weizmannia coagulans, Xanthomonas sp., Zymomonas mobilis
Vuolanto, A.; Uotila, S.; Leisola, M.; Visuri, K.
Solubility and crystallization of xylose isomerase from Streptomyces rubiginosus
J. Crystal Growth
257
403-411
2003
Streptomyces rubiginosus
-
Cha, J.
Contribution of second metal binding site for metal specificity of D-xylose isomerase
J. Microbiol. Biotechnol.
9
757-763
1999
Streptomyces rubiginosus
-
Cha, J.; Batt, C.A.
Lowering the pH optimum of D-xylose isomerase: the effect of mutations of the negatively charged residues
Mol. Cells
8
374-382
1998
Streptomyces rubiginosus
Straatsma, J.; Vellenga, K.; Witt, H.G.J.de; Joosten, G.E.
Isomerization of glucose to fructose. 2. Optimization of reaction conditions in the production of high fructose syrup by isomerization of glucose catalyzed by a whole cell immobilized glucose isomerase catalyst
Ind. Eng. Chem. Process Des. Dev.
22
356-361
1983
Streptomyces phaeochromogenes, Actinoplanes missouriensis, Weizmannia coagulans, Streptomyces rubiginosus
-
Hanson, B.L.; Langan, P.; Katz, A.K.; Li, X.; Harp, J.M.; Glusker, J.P.; Schoenborn, B.P.; Bunick, G.J.
A preliminary time-of-flight neutron diffraction study of Streptomyces rubiginosus D-xylose isomerase
Acta Crystallogr. Sect. D
60
241-249
2004
Streptomyces rubiginosus
Vilonen, K.M.; Vuolanto, A.; Jokela, J.; Leisola, M.S.; Krause, A.O.
Enhanced glucose to fructose conversion in acetone with xylose isomerase stabilized by crystallization and cross-linking
Biotechnol. Prog.
20
1555-1560
2004
Streptomyces rubiginosus
Karimaki, J.; Parkkinen, T.; Santa, H.; Pastinen, O.; Leisola, M.; Rouvinen, J.; Turunen, O.
Engineering the substrate specificity of xylose isomerase
Protein Eng. Des. Sel.
17
861-869
2004
Actinoplanes missouriensis, Streptomyces rubiginosus (P24300), Streptomyces rubiginosus
Meilleur, F.; Snell, E.H.; van der Woerd, M.J.; Judge, R.A.; Myles, D.A.
A quasi-Laue neutron crystallographic study of D-xylose isomerase
Eur. Biophys. J.
35
601-609
2006
Streptomyces rubiginosus
Snell, E.H.; van der Woerd, M.J.; Damon, M.; Judge, R.A.; Myles, D.A.; Meilleur, F.
Optimizing crystal volume for neutron diffraction: D-xylose isomerase
Eur. Biophys. J.
35
621-632
2006
Streptomyces rubiginosus
Katz, A.K.; Li, X.; Carrell, H.L.; Hanson, B.L.; Langan, P.; Coates, L.; Schoenborn, B.P.; Glusker, J.P.; Bunick, G.J.
Locating active-site hydrogen atoms in D-xylose isomerase: time-of-flight neutron diffraction
Proc. Natl. Acad. Sci. USA
103
8342-8347
2006
Streptomyces rubiginosus (P24300), Streptomyces rubiginosus
Kovalevsky, A.Y.; Katz, A.K.; Carrell, H.L.; Hanson, L.; Mustyakimov, M.; Fisher, S.Z.; Coates, L.; Schoenborn, B.P.; Bunick, G.J.; Glusker, J.P.; Langan, P.
Hydrogen location in stages of an enzyme-catalyzed reaction: time-of-flight neutron structure of D-xylose isomerase with bound D-xylulose
Biochemistry
47
7595-7597
2008
Streptomyces rubiginosus (P24300)
Malek, K.; Coppens, M.O.
Molecular simulations of solute transport in xylose isomerase crystals
J. Phys. Chem. B
112
1549-1554
2008
Streptomyces rubiginosus (P24300)
Kovalevsky, A.Y.; Hanson, L.; Fisher, S.Z.; Mustyakimov, M.; Mason, S.A.; Forsyth, V.T.; Blakeley, M.P.; Keen, D.A.; Wagner, T.; Carrell, H.L.; Katz, A.K.; Glusker, J.P.; Langan, P.
Metal ion roles and the movement of hydrogen during reaction catalyzed by D-xylose isomerase: a joint x-ray and neutron diffraction study
Structure
18
688-699
2010
Streptomyces rubiginosus (P24300)
Toteva, M.M.; Silvaggi, N.R.; Allen, K.N.; Richard, J.P.
Binding energy and catalysis by D-xylose isomerase: kinetic, product, and X-ray crystallographic analysis of enzyme-catalyzed isomerization of (R)-glyceraldehyde
Biochemistry
50
10170-10181
2011
Streptomyces rubiginosus (P24300)
Waltman, M.; Yang, Z.; Langan, P.; Graham, D.; Kovalevsky, A.
Engineering acidic Streptomyces rubiginosus D-xylose isomerase by rational enzyme design
Protein Eng.
27
59-64
2014
Streptomyces rubiginosus
Munshi, P.; Snell, E.H.; van der Woerd, M.J.; Judge, R.A.; Myles, D.A.; Ren, Z.; Meilleur, F.
Neutron structure of the cyclic glucose-bound xylose isomerase E186Q mutant
Acta Crystallogr. Sect. D
70
414-420
2014
Streptomyces rubiginosus (P24300)
Langan, P.; Sangha, A.K.; Wymore, T.; Parks, J.M.; Yang, Z.K.; Hanson, B.L.; Fisher, Z.; Mason, S.A.; Blakeley, M.P.; Forsyth, V.T.; Glusker, J.P.; Carrell, H.L.; Smith, J.C.; Keen, D.A.; Graham, D.E.; Kovalevsky, A.
L-Arabinose binding, isomerization, and epimerization by D-xylose isomerase X-ray/neutron crystallographic and molecular simulation study
Structure
22
1287-1300
2014
Streptomyces rubiginosus (P24300)
