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Information on EC 4.2.2.2 - pectate lyase and Organism(s) Paenibacillus amylolyticus and UniProt Accession D3JTC1

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EC Tree
     4 Lyases
         4.2 Carbon-oxygen lyases
             4.2.2 Acting on polysaccharides
                4.2.2.2 pectate lyase
IUBMB Comments
Favours pectate, the anion, over pectin, the methyl ester (which is the preferred substrate of EC 4.2.2.10, pectin lyase).
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This record set is specific for:
Paenibacillus amylolyticus
UNIPROT: D3JTC1
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The taxonomic range for the selected organisms is: Paenibacillus amylolyticus
The enzyme appears in selected viruses and cellular organisms
Synonyms
pectate lyase, polygalacturonate lyase, pectate lyase c, pectate lyase a, alkaline pectate lyase, pectate lyase b, pel-2, alkaline polygalacturonate lyase, pel9a, pel168, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
alpha-1,4-D-endopolygalacturonic acid lyase
-
-
-
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EC 4.2.99.3
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-
-
-
endo-alpha-1,4-polygalacturonic acid lyase
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-
-
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endogalacturonate transeliminase
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-
-
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endopectin methyltranseliminase
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-
-
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lyase, pectate
-
-
-
-
pectate transeliminase
-
-
-
-
pectic acid lyase
-
-
-
-
pectic acid transeliminase
-
-
-
-
pectic lyase
-
-
-
-
PGA lyase
-
-
-
-
Pla
-
-
-
-
PLB
-
-
-
-
PLC
-
-
-
-
poly(1,4-alpha-D-galacturonide) lyase
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-
-
-
polygalacturonate lyase
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-
-
-
polygalacturonic acid lyase
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-
-
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polygalacturonic transeliminase
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-
-
-
PPase-N
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
elimination
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-
-
-
PATHWAY SOURCE
PATHWAYS
SYSTEMATIC NAME
IUBMB Comments
(1->4)-alpha-D-galacturonan lyase
Favours pectate, the anion, over pectin, the methyl ester (which is the preferred substrate of EC 4.2.2.10, pectin lyase).
CAS REGISTRY NUMBER
COMMENTARY hide
9015-75-2
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SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
additional information
?
-
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Ca2+
activates optimally at 0-2.5 mM
Ca2+
activates optimally at 0-2.5 mM
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
PelA; gene pelA
UniProt
Manually annotated by BRENDA team
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
PLYA_PAEAM
222
1
23253
Swiss-Prot
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Boland, W.E.; Henriksen, E.D.; Doran-Peterson, J.
Characterization of two Paenibacillus amylolyticus strain 27C64 pectate lyases with activity on highly methylated pectin
Appl. Environ. Microbiol.
76
6006-6009
2010
Paenibacillus amylolyticus (D3JTC1), Paenibacillus amylolyticus (D3JTC2), Paenibacillus amylolyticus, Paenibacillus amylolyticus 27C64 (D3JTC1), Paenibacillus amylolyticus 27C64 (D3JTC2), Paenibacillus amylolyticus 27C64
Manually annotated by BRENDA team