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Information on EC 4.2.1.49 - urocanate hydratase and Organism(s) Pseudomonas putida and UniProt Accession P25080

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EC Tree
     4 Lyases
         4.2 Carbon-oxygen lyases
             4.2.1 Hydro-lyases
                4.2.1.49 urocanate hydratase
IUBMB Comments
Contains tightly bound NAD+.
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This record set is specific for:
Pseudomonas putida
UNIPROT: P25080
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Word Map
The taxonomic range for the selected organisms is: Pseudomonas putida
The expected taxonomic range for this enzyme is: Bacteria, Eukaryota, Archaea
Synonyms
urocanase, urocanate hydratase, uroc1, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4'-Imidazolone-5'-propionate hydro-lyase
-
-
-
-
4,5-dihydro-4-oxo-5-imidazole-propanoate hydro-lyase
-
-
-
-
4-Imidazolone-5'-propionate hydrolyase
-
-
-
-
Hydratase, urocanate
-
-
-
-
Imidazolonepropionate hydrolase
-
-
-
-
Urocanase
-
-
-
-
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate = urocanate + H2O
show the reaction diagram
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
elimination
-
-
-
-
PATHWAY SOURCE
PATHWAYS
-
-, -, -, -
SYSTEMATIC NAME
IUBMB Comments
3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate hydro-lyase (urocanate-forming)
Contains tightly bound NAD+.
CAS REGISTRY NUMBER
COMMENTARY hide
9014-58-8
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
2-Aminourocanate + H2O
2-Aminoimidazolone propionate
show the reaction diagram
-
reacts 1000 times more slowly than urocanate
-
-
?
2-Fluorourocanate + H2O
2-Fluoroimidazolone propionate
show the reaction diagram
-
reacts 150 times more slowly than urocanate
-
-
?
2-Methylurocanate + H2O
2-Methylimidazolone propionate
show the reaction diagram
Urocanate + H2O
4,5-Dihydro-4-oxo-5-imidazolepropanoate
show the reaction diagram
Urocanate + H2O
?
show the reaction diagram
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
Urocanate + H2O
?
show the reaction diagram
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
NAD+
tightly bound cofactor
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2-mercaptoethanol
-
-
2-Methylimidazolone propionate
-
-
2-Methylurocanate
-
-
3-Mercaptopropionate
-
-
4-bromocrotonate
-
irreversible inhibition
crotonate
-
-
cyanide
dithioerythritol
-
-
fumarate
-
-
glycylglycine
hydroxylamine
Imidazolepropionate
O-Methylhydroxylamine
-
-
p-chloromercuriphenylsulfonate
-
-
p-mercuribenzoate
-
-
phenylhydrazine
-
-
Semicarbazide
-
-
Sodium dithionite
-
-
succinate
-
competitive
Sulfide
-
-
thioglycolate
-
competitive
additional information
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0354 - 0.7
Urocanate
additional information
additional information
-
Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0003
Cu2+
-
-
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
-
-
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
0 - 50
-
30% of maximal activity at 0¦C, no activity about 50¦C
additional information
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
Uniprot
Manually annotated by BRENDA team
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
HUTU_PSEPU
557
0
60804
Swiss-Prot
-
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
110000
-
sedimentation equilibrium centrifugation
54000
-
2 * 54000 sedimentation equilibrium centrifugation
58000
-
2 * 58000, SDS-PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
dimer
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
hanging-drop vapour-diffusion method, crystallized after removing one of the seven free thiol groups. The crystal structure is solved by multiwavelength anomalous diffraction using a seleno-methionine derivative and then refined at 1.14 A resolution
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
genomic clone, overexpressed in Escherichia coli
-
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
George, D.J.; Phillips, A.T.
Identification of alpha-ketobutyrate as the prosthetic group of urocanase from Pseudomonas putida
J. Biol. Chem.
245
528-537
1970
Gallus gallus, Felis catus, Pseudomonas putida
Manually annotated by BRENDA team
Kaeppeli, F.; Retey, J.
Studies on the mechanism and stereospecificity of the urocanase reaction
Eur. J. Biochem.
23
198-202
1971
Bos taurus, Pseudomonas putida
Manually annotated by BRENDA team
Phillips, A.T.; George, D.J.
Urocanase (Pseudomonas putida)
Methods Enzymol.
17B
73-79
1971
Bos taurus, Felis catus, Pseudomonas putida
-
Manually annotated by BRENDA team
Lynch, M.C.; Phillips, A.T.
Urocanase of Pseudomonas putida
J. Biol. Chem.
247
7799-7805
1972
Pseudomonas putida
Manually annotated by BRENDA team
Hug, D.H.; Roth, D.
Inhibition of urocanase by cupric ion
Biochim. Biophys. Acta
293
497-505
1973
Pseudomonas putida, Pseudomonas putida A3.12
Manually annotated by BRENDA team
Hug, D.H.; Hunter, J.K.
Effect of temperature on urocanase from a psychrophile, Pseudomonas putida
Biochemistry
13
1427-1430
1974
Pseudomonas putida, Pseudomonas putida A3.12, Rattus norvegicus
Manually annotated by BRENDA team
Cohn, M.S.; Lynch, M.C.; Phillips, A.T.
Catalytic and thermodynamic properties of the urocanate hydratase reaction
Biochim. Biophys. Acta
377
444-453
1975
Pseudomonas putida
Manually annotated by BRENDA team
Lane R.S.; Scheuer, S.A.; Thill, G.; Dyll, R.J.
Irreversible inactivation of urocanase by 4-bromocrotonate
Biochem. Biophys. Res. Commun.
71
400-407
1976
Pseudomonas putida
Manually annotated by BRENDA team
Egan, R.M.; Phillips, A.T.
Presence of tightly bound NAD+ in urocanase of Pseudomonas putida
J. Biol. Chem.
252
5701-5707
1977
Pseudomonas putida, Pseudomonas putida A3.12
Manually annotated by BRENDA team
Hug, D.H.; O'Donnell, P.S.; Hunter, J.K.
Photoactivation of urocanase in Pseudomonas putida
J. Biol. Chem.
253
7622-7629
1978
Pseudomonas putida, Pseudomonas putida A3.12
Manually annotated by BRENDA team
Hug, D.H.; O'Donnell, P.S.; Hunter, J.K.
Thioglycolate, competitive inhibitor of urocanase
Biochem. Biophys. Res. Commun.
81
1435-1442
1978
Pseudomonas putida, Pseudomonas putida A3.12
Manually annotated by BRENDA team
Keul, V.; Kaeppeli, F.; Ghosh, C.; Krebs, T.; Robinson, J.A.; Retey, J.
Identification of the prosthetic group of urocanase
J. Biol. Chem.
254
843-851
1979
Bos taurus, Pseudomonas putida
Manually annotated by BRENDA team
O'Donnell, P.S.; Hug, D.H.; Hunter, J.K.
Sulfhydryl groups in urocanase: Relationship to nicotinamide adenine dinucleotide binding
Arch. Biochem. Biophys.
202
242-249
1980
Pseudomonas putida, Pseudomonas putida A3.12
Manually annotated by BRENDA team
Gerlinger, E.; Hull, W.E.; Retey, J.
Mechanistic study of urocanase reaction using deuterated substrates and 1H-NMR spectroscopy
Eur. J. Biochem.
117
629-634
1981
Pseudomonas putida
Manually annotated by BRENDA team
Hug, D.H.; Hunter, J.K.
Roles of cysteine sulfinate and transaminase on in vivo dark reversion of urocanase in Pseudomonas putida
J. Bacteriol.
151
813-818
1982
Pseudomonas putida, Pseudomonas putida A3.12
Manually annotated by BRENDA team
Matherly, L.H.; Phillips, A.T.
Identification of enol tautomer of imidazolone propionate as the urocanase reaction product
Arch. Biochem. Biophys.
220
314-317
1983
Pseudomonas putida
Manually annotated by BRENDA team
Gerlinger, E.; Hull, W.E.; Retey, J.
Mechanistic studies of the urocanase reaction using 1H- and 31P-NMR spectroscopy and the substrate analogue 2-methylurocanate
Tetrahedron
39
3523-3528
1983
Pseudomonas putida
-
Manually annotated by BRENDA team
Hug, D.H.; O'Donnell, P.S.
Evidence against a temperature-dependent conformational change in urocanase from Pseudomonas putida
Biochim. Biophys. Acta
830
101-104
1985
Pseudomonas putida, Pseudomonas putida A3.12
Manually annotated by BRENDA team
Consevage, M.W.; Porter, R.D.; Phillips, A.T.
Cloning and expression in Escherichia coli of histidine utilization genes from Pseudomonas putida
J. Bacteriol.
162
138-146
1985
Pseudomonas putida
Manually annotated by BRENDA team
Venema, R.C.; Hug, D.H.
Activation of urocanase from Pseudomonas putida by electronically excited triplet species
J. Biol. Chem.
260
12190-12193
1985
Pseudomonas putida, Pseudomonas putida A3.12
Manually annotated by BRENDA team
Gerlinger, E.; Retey, J.
Proposal for the mechanism of action of urocanase. Interference from the inhibition by 2-methylurocanate
Z. Naturforsch. C
42
349-352
1987
Pseudomonas putida
Manually annotated by BRENDA team
O'Donnell, P.S.; Hug, D.H.
Thermal activation of photoactivatable urocanase from Pseudomonas putida
J. Photochem. Photobiol. B, Biol.
3
429-435
1989
Pseudomonas putida, Pseudomonas putida A3.12
Manually annotated by BRENDA team
Hunter, J.K.; Hug, D.H.
Specific inhibition of bacterial and bovine urocanase by glycylglycine
Pept. Res.
2
240-245
1989
Bos taurus, Pseudomonas putida, Pseudomonas putida A3.12
Manually annotated by BRENDA team
Klepp, J.; Fallert-Mller, A.; Grimm, K.; Hull, W.E.; Retey, J.
Mechanism of action of urocanase
Eur. J. Biochem.
192
669-676
1990
Pseudomonas putida
Manually annotated by BRENDA team
Klepp, J.; Retey, J.
The stoichiometry of the tightly bound NAD+ in urocanase
Eur. J. Biochem.
185
615-619
1989
Pseudomonas putida
Manually annotated by BRENDA team
Lenz, M.; Retey, J.
Cloning, expression and mutational analysis of the urocanase gene (hutU) from Pseudomonas putida
Eur. J. Biochem.
217
429-434
1993
Pseudomonas putida
Manually annotated by BRENDA team
Retey, J.
The urocanase story: A novel role of NAD+ as electrophile
Arch. Biochem. Biophys.
314
1-16
1994
Bacillus subtilis, Bos taurus, Cavia porcellus, Clostridium tetanomorphum, Felis catus, Gallus gallus, Klebsiella aerogenes, Pseudomonas putida, Rattus norvegicus, Trifolium repens
Manually annotated by BRENDA team
Schubert, C.; Roettele, H.; Spraul, M.; Retey, J.
On the mechanism of action of urocanase: observation of the enzyme-bound NAD+ -inhibitor adduct by 13C NMR spectroscopy
Angew. Chem. Int. Ed. Engl.
34
652-4
1995
Pseudomonas putida
-
Manually annotated by BRENDA team
Kessler, D.; Retey, J.; Schulz, G.E.
Structure and action of urocanase
J. Mol. Biol.
342
183-194
2004
Pseudomonas putida (P25080), Pseudomonas putida
Manually annotated by BRENDA team