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(1E)-hex-1-ene-1,2,6-tricarboxylic acid + H2O
(2R)-hexane-1,2,6-tricarboxyclic acid
-
-
-
-
?
(1E)-pent-1-ene-1,2,5-tricarboxylic acid + H2O
(2R)-pentane-1,2,5-tricarboxylic acid
-
-
-
-
?
(2R)-butane-1,2,4-tricarboxylic acid
but-1-ene-1,2,4-tricarboxylic acid + H2O
-
-
-
-
?
(R)-2-hydroxybutane-1,2,4-tricarboxylate
(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
i.e. (R)-homocitrate, overall reaction, the enzyme catalyzes both the dehydration of (R)-homocitrate to form cis-homoaconitate, and hydration producing homoisocitrate
i.e. homoisocitrate
-
r
(R)-2-hydroxybutane-1,2,4-tricarboxylate
(Z)-but-1-ene-1,2,4-tricarboxylate + H2O
(R)-2-hydroxybutane-1,2,4-tricarboxylate + H2O
(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
(Z)-but-1-ene-1,2,4-tricarboxylate + H2O
(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
but-1-ene-1,2,4-tricarboxylic acid + H2O
(2R)-butane-1,2,4-tricarboxylic acid
-
-
-
-
?
cis-(homo)2aconitate + H2O
(-)-threo-iso(homo)2citrate
-
-
-
?
cis-(homo)2aconitate + H2O
?
the activity is similar as with (R)-homocitrate
-
-
?
cis-(homo)3aconitate + H2O
(-)-threo-iso(homo)3citrate
-
-
-
?
cis-(homo)3aconitate + H2O
?
the activity is similar as with (R)-homocitrate
-
-
?
cis-(homo)4aconitate + H2O
?
the activity is similar as with (R)-homocitrate
-
-
?
dihomocitrate
cis-(homo)2aconitate + H2O
-
-
-
-
?
trihomocitrate
cis-(homo)3aconitate + H2O
-
-
-
-
?
additional information
?
-
(R)-2-hydroxybutane-1,2,4-tricarboxylate

(Z)-but-1-ene-1,2,4-tricarboxylate + H2O
Cryptococcus neoformans var. grubii serotype A
-
-
-
?
(R)-2-hydroxybutane-1,2,4-tricarboxylate
(Z)-but-1-ene-1,2,4-tricarboxylate + H2O
Cryptococcus neoformans var. grubii serotype A H99 / ATCC 208821 / CBS 10515 / FGSC 9487
-
-
-
?
(R)-2-hydroxybutane-1,2,4-tricarboxylate
(Z)-but-1-ene-1,2,4-tricarboxylate + H2O
i.e. (R)-homocitrate, first half-reaction
i.e. cis-homoaconitate, the activity in the reverse direction is similar as with (R)-homocitrate
-
r
(R)-2-hydroxybutane-1,2,4-tricarboxylate + H2O

(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
Cryptococcus neoformans var. grubii serotype A
-
-
-
?
(R)-2-hydroxybutane-1,2,4-tricarboxylate + H2O
(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
Cryptococcus neoformans var. grubii serotype A H99 / ATCC 208821 / CBS 10515 / FGSC 9487
-
-
-
?
(Z)-but-1-ene-1,2,4-tricarboxylate + H2O

(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
Cryptococcus neoformans var. grubii serotype A
-
-
-
?
(Z)-but-1-ene-1,2,4-tricarboxylate + H2O
(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
Cryptococcus neoformans var. grubii serotype A H99 / ATCC 208821 / CBS 10515 / FGSC 9487
-
-
-
?
(Z)-but-1-ene-1,2,4-tricarboxylate + H2O
(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
second half-reaction
i.e. homoisocitrate
-
r
additional information

?
-
-
homoaconitase enzymes catalyze hydrolyase reactions in the alpha-aminoadipate pathway for lysine biosynthesis or the 2-oxosuberate pathway for methanogenic coenzyme B biosynthesis
-
-
?
additional information
?
-
homoaconitase enzymes catalyze hydrolyase reactions in the alpha-aminoadipate pathway for lysine biosynthesis or the 2-oxosuberate pathway for methanogenic coenzyme B biosynthesis
-
-
?
additional information
?
-
-
homoaconitase together with the endogenous homoisocitrate dehydrogenase, EC 1.1.1.87, catalyze all of the isomerization and oxidative decarboxylation reactions required to form 2-oxoadipate, 2-oxopimelate, and 2-oxosuberate, completing three iterations of the 2-oxoacid elongation pathway. Methanogenic archaeal homoaconitases and fungal homoaconitases evolved in parallel in the aconitase superfamily, LC-MS analysis of enzyme reaction products, overview
-
-
?
additional information
?
-
homoaconitase together with the endogenous homoisocitrate dehydrogenase, EC 1.1.1.87, catalyze all of the isomerization and oxidative decarboxylation reactions required to form 2-oxoadipate, 2-oxopimelate, and 2-oxosuberate, completing three iterations of the 2-oxoacid elongation pathway. Methanogenic archaeal homoaconitases and fungal homoaconitases evolved in parallel in the aconitase superfamily, LC-MS analysis of enzyme reaction products, overview
-
-
?
additional information
?
-
-
HACN has no detectable activity with citraconate or isopropylmalate
-
-
?
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(R)-2-hydroxybutane-1,2,4-tricarboxylate
(Z)-but-1-ene-1,2,4-tricarboxylate + H2O
(R)-2-hydroxybutane-1,2,4-tricarboxylate + H2O
(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
(Z)-but-1-ene-1,2,4-tricarboxylate + H2O
(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
cis-(homo)2aconitate + H2O
(-)-threo-iso(homo)2citrate
-
-
-
?
cis-(homo)3aconitate + H2O
(-)-threo-iso(homo)3citrate
-
-
-
?
additional information
?
-
(R)-2-hydroxybutane-1,2,4-tricarboxylate

(Z)-but-1-ene-1,2,4-tricarboxylate + H2O
Cryptococcus neoformans var. grubii serotype A
-
-
-
?
(R)-2-hydroxybutane-1,2,4-tricarboxylate
(Z)-but-1-ene-1,2,4-tricarboxylate + H2O
Cryptococcus neoformans var. grubii serotype A H99 / ATCC 208821 / CBS 10515 / FGSC 9487
-
-
-
?
(R)-2-hydroxybutane-1,2,4-tricarboxylate + H2O

(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
Cryptococcus neoformans var. grubii serotype A
-
-
-
?
(R)-2-hydroxybutane-1,2,4-tricarboxylate + H2O
(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
Cryptococcus neoformans var. grubii serotype A H99 / ATCC 208821 / CBS 10515 / FGSC 9487
-
-
-
?
(Z)-but-1-ene-1,2,4-tricarboxylate + H2O

(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
Cryptococcus neoformans var. grubii serotype A
-
-
-
?
(Z)-but-1-ene-1,2,4-tricarboxylate + H2O
(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate
Cryptococcus neoformans var. grubii serotype A H99 / ATCC 208821 / CBS 10515 / FGSC 9487
-
-
-
?
additional information

?
-
-
homoaconitase enzymes catalyze hydrolyase reactions in the alpha-aminoadipate pathway for lysine biosynthesis or the 2-oxosuberate pathway for methanogenic coenzyme B biosynthesis
-
-
?
additional information
?
-
homoaconitase enzymes catalyze hydrolyase reactions in the alpha-aminoadipate pathway for lysine biosynthesis or the 2-oxosuberate pathway for methanogenic coenzyme B biosynthesis
-
-
?
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0.036 - 0.66
(1E)-hex-1-ene-1,2,6-tricarboxylic acid
0.03 - 1.6
(1E)-pent-1-ene-1,2,5-tricarboxylic acid
1.5
(R)-homocitrate
pH 8.5, 60°C, recombinant enzyme, dehydratase reaction
0.022 - 0.46
but-1-ene-1,2,4-tricarboxylic acid
0.03
cis-homo2aconitate
pH 9.0, 60°C, recombinant enzyme, hydrolase reaction
0.036
cis-homo3aconitate
pH 9.0, 60°C, recombinant enzyme, hydrolase reaction
0.175
cis-homo4aconitate
pH 9.0, 60°C, recombinant enzyme, hydrolase reaction
0.022
cis-homoaconitate
pH 9.0, 60°C, recombinant enzyme, hydrolase reaction
0.33
Maleate
pH 9.0, 60°C, recombinant enzyme, hydrolase reaction
additional information
additional information
-
0.036
(1E)-hex-1-ene-1,2,6-tricarboxylic acid

-
wild type enzyme
0.64
(1E)-hex-1-ene-1,2,6-tricarboxylic acid
-
mutant enzyme R26V/T27Y
0.65
(1E)-hex-1-ene-1,2,6-tricarboxylic acid
-
mutant enzyme T27A
0.66
(1E)-hex-1-ene-1,2,6-tricarboxylic acid
-
mutant enzyme R26V
0.03
(1E)-pent-1-ene-1,2,5-tricarboxylic acid

-
wild type enzyme
0.269
(1E)-pent-1-ene-1,2,5-tricarboxylic acid
-
mutant enzyme T27A
0.87
(1E)-pent-1-ene-1,2,5-tricarboxylic acid
-
mutant enzyme R26V
1.6
(1E)-pent-1-ene-1,2,5-tricarboxylic acid
-
mutant enzyme R26V/T27Y
0.022
but-1-ene-1,2,4-tricarboxylic acid

-
wild type enzyme
0.135
but-1-ene-1,2,4-tricarboxylic acid
-
mutant enzyme R26K
0.22
but-1-ene-1,2,4-tricarboxylic acid
-
mutant enzyme R26V
0.22
but-1-ene-1,2,4-tricarboxylic acid
-
mutant enzyme T27A
0.46
but-1-ene-1,2,4-tricarboxylic acid
-
mutant enzyme R26V/T27Y
additional information
additional information

-
steady-state kinetics
-
additional information
additional information
steady-state kinetics
-
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1.9 - 4.1
(1E)-hex-1-ene-1,2,6-tricarboxylic acid
0.66 - 6.6
(1E)-pent-1-ene-1,2,5-tricarboxylic acid
0.37
(R)-homocitrate
pH 8.5, 60°C, recombinant enzyme, dehydratase reaction
0.48 - 2.5
but-1-ene-1,2,4-tricarboxylic acid
0.66
cis-homo2aconitate
pH 9.0, 60°C, recombinant enzyme, hydrolase reaction
2.5
cis-homo3aconitate
pH 9.0, 60°C, recombinant enzyme, hydrolase reaction
5.6
cis-homo4aconitate
pH 9.0, 60°C, recombinant enzyme, hydrolase reaction
0.75
cis-homoaconitate
pH 9.0, 60°C, recombinant enzyme, hydrolase reaction
6
Maleate
pH 9.0, 60°C, recombinant enzyme, hydrolase reaction
1.9
(1E)-hex-1-ene-1,2,6-tricarboxylic acid

-
mutant enzyme R26V/T27Y
2.5
(1E)-hex-1-ene-1,2,6-tricarboxylic acid
-
wild type enzyme
2.8
(1E)-hex-1-ene-1,2,6-tricarboxylic acid
-
mutant enzyme R26V
4.1
(1E)-hex-1-ene-1,2,6-tricarboxylic acid
-
mutant enzyme T27A
0.66
(1E)-pent-1-ene-1,2,5-tricarboxylic acid

-
wild type enzyme
2.2
(1E)-pent-1-ene-1,2,5-tricarboxylic acid
-
mutant enzyme T27A
5.8
(1E)-pent-1-ene-1,2,5-tricarboxylic acid
-
mutant enzyme R26V
6.6
(1E)-pent-1-ene-1,2,5-tricarboxylic acid
-
mutant enzyme R26V/T27Y
0.48
but-1-ene-1,2,4-tricarboxylic acid

-
mutant enzyme R26V
0.75
but-1-ene-1,2,4-tricarboxylic acid
-
wild type enzyme
1.43
but-1-ene-1,2,4-tricarboxylic acid
-
mutant enzyme R26K
1.7
but-1-ene-1,2,4-tricarboxylic acid
-
mutant enzyme R26V/T27Y
2.5
but-1-ene-1,2,4-tricarboxylic acid
-
mutant enzyme T27A
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malfunction

Cryptococcus neoformans var. grubii serotype A
deletion of the CNAG_02565 gene results in lysine auxotrophy. The lys4 mutant shows increased sensitivity to oxidative stress, agents that challenge cell wall/membrane integrity, and azole antifungal drugs. The phenotype is due in part to impaired mitochondrial function as a result of LYS4 deletion, which disrupts iron homeostasis in the organelle. The lys4 mutant is attenuated virulence in a mouse inhalation model of cryptococcosis. Loss of the enzyme results in organelle dysfunction due to a potential impact on Fe-S levels
malfunction
Cryptococcus neoformans var. grubii serotype A H99 / ATCC 208821 / CBS 10515 / FGSC 9487
-
deletion of the CNAG_02565 gene results in lysine auxotrophy. The lys4 mutant shows increased sensitivity to oxidative stress, agents that challenge cell wall/membrane integrity, and azole antifungal drugs. The phenotype is due in part to impaired mitochondrial function as a result of LYS4 deletion, which disrupts iron homeostasis in the organelle. The lys4 mutant is attenuated virulence in a mouse inhalation model of cryptococcosis. Loss of the enzyme results in organelle dysfunction due to a potential impact on Fe-S levels
-
physiological function

Cryptococcus neoformans var. grubii serotype A
the enzyme expression is regulated by iron levels and by the iron-related transcription factors Hap3 and HapX. The enzyme is essential for lysine biosynthesis and is required for full virulence. The iron metabolism and homeostasis have a large influence on the virulence of Cryptococcus neoformans
physiological function
Cryptococcus neoformans var. grubii serotype A H99 / ATCC 208821 / CBS 10515 / FGSC 9487
-
the enzyme expression is regulated by iron levels and by the iron-related transcription factors Hap3 and HapX. The enzyme is essential for lysine biosynthesis and is required for full virulence. The iron metabolism and homeostasis have a large influence on the virulence of Cryptococcus neoformans
-
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Drevland, R.M.; Jia, Y.; Palmer, D.R.; Graham, D.E.
Methanogen homoaconitase catalyzes both hydrolyase reactions in coenzyme B biosynthesis
J. Biol. Chem.
283
28888-28896
2008
Methanocaldococcus jannaschii, Methanocaldococcus jannaschii (Q58991)
brenda
Jeyakanthan, J.; Drevland, R.M.; Gayathri, D.R.; Velmurugan, D.; Shinkai, A.; Kuramitsu, S.; Yokoyama, S.; Graham, D.E.
Substrate specificity determinants of the methanogen homoaconitase enzyme: structure and function of the small subunit
Biochemistry
49
2687-2696
2010
Methanocaldococcus jannaschii
brenda
Lee, E.H.; Lee, K.; Hwang, K.Y.
Structural characterization and comparison of the large subunits of IPM isomerase and homoaconitase from Methanococcus jannaschii
Acta Crystallogr. Sect. D
70
922-931
2014
Methanocaldococcus jannaschii (Q58409), Methanocaldococcus jannaschii, Methanocaldococcus jannaschii DSM 2661 (Q58409)
brenda
Do, E.; Park, M.; Hu, G.; Caza, M.; Kronstad, J.W.; Jung, W.H.
The lysine biosynthetic enzyme Lys4 influences iron metabolism, mitochondrial function and virulence in Cryptococcus neoformans
Biochem. Biophys. Res. Commun.
477
706-711
2016
Cryptococcus neoformans var. grubii serotype A (J9VIU5), Cryptococcus neoformans var. grubii serotype A H99 / ATCC 208821 / CBS 10515 / FGSC 9487 (J9VIU5)
brenda