Reference on EC 4.1.1.18 - lysine decarboxylase
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REF. 
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Beier, H.; Fecker, L.F.; Berlin, J.
Lysine decarboxylase from Hafnia alvei: purification, molecular data and preparation of polyclonal antibodies
Z. Naturforsch. C
42
1307-1312
1987
Hafnia alvei
-
Pelosi, L.A.; Rother, A.; Edwards, J.M.
Lysine decarboxylase activity and alkaloid production in Heimia salicifolia cultures
Phytochemistry
25
2315-2319
1986
Heimia salicifolia
-
Fecker, L.F.; Beier, H.; Berlin, J.
Cloning and characterization of a lysine decarboxylase gene from Hafnia alvei
Mol. Gen. Genet.
203
177-184
1986
Hafnia alvei
-
Vienozinskiene, J.; Januseviciute, R.; Pauliukonis, A.; Kazlauskas, D.
Lysine decarboxylase assay by the pH-stat method
Anal. Biochem.
146
180-183
1985
Escherichia coli
Poesoe, H.; McCann, P.P.; Tanskanen, R.; Bey, P.; Sjoerdsma, A.
Inhibition of growth of Mycoplasma dispar by DL-alpha-difluoromethyllsine, a selective irreversible inhibitor of lysine decarboxylase, and reversal by cadaverine (1,5-diaminopentane)
Biochem. Biophys. Res. Commun.
125
205-210
1984
Mycoplasma dispar
Schoofs, G.; Teichmann, S.; Hartmann, T.; Wink, M.
Lysine decarboxylase in plants and its integration in quinolizidine alkaloid biosynthesis
Phytochemistry
22
65-69
1983
Anchusa italica, Arum maculatum, Asarum maculatum, Astragalus cicer, Astragalus glycyphyllos, Atropa belladonna, Baptisia australis, Vicia faba, Calla palustris, Oxybasis rubra, Conium maculatum, Cytisus beanii, Cytisus canariensis, Cytisus scoparius, Dictamnus albus, Galega officinalis, Genista anglica, Genista hispanica, Genista lydia, Genista pilosa, Genista sagittalis, Genista tinctoria, Glycine max, Glycyrrhiza echinata, Laburnum alpinum, Laburnum anagyroides, Levisticum officinale, Medicago sativa, Lupinus albus, Lupinus luteus, Lupinus polyphyllus, Malva sylvestris, Melilotus albus, Mentha suaveolens, Menyanthes trifoliata, Nicotiana tabacum, Phaseolus vulgaris, Pisum sativum, Robinia pseudoacacia, Ruta graveolens, Sanguisorba officinalis, Saponaria officinalis, Sedum acre, Senecio fuchsii, Styphnolobium japonicum, Sophora tetraptera, Spinacia oleracea, Symphytum officinale, Trollius europaeus, Valeriana excelsa subsp. sambucifolia
-
Boeker, E.A.; Fischer, E.H.
Lysine decarboxylase (Escherichia coli B)
Methods Enzymol.
94
180-184
1983
Escherichia coli, Escherichia coli B / ATCC 11303
Kamio, Y.; Terawaki, Y.
Purification and properties of Selenomonas ruminantium lysine decarboxylase
J. Bacteriol.
153
658-664
1983
Selenomonas ruminantium
Hartmann, T.; Schoofs, G.; Wink, M.
A chloroplast-localized lysine decarboxylase of Lupinus polyphyllus: the first enzyme in the biosynthetic pathway of quinolizidine alkaloids
FEBS Lett.
115
35-38
1980
Lupinus polyphyllus
Sabo, D.L.; Fischer, E.H.
Chemical properties of Escherichia coli lysine decarboxylase including a segment of its pyridoxal 5 -phosphate binding site
Biochemistry
13
670-676
1974
Escherichia coli
Sabo, D.L.; Boeker, E.A.; Byers, B.; Waron, H.; Fischer, E.H.
Purification and physical properties of inducible Escherichia coli lysine decarboxylase
Biochemistry
13
662-670
1974
Escherichia coli, Escherichia coli B / ATCC 11303
Soda, K.; Moriguchi, M.
L-Lysine decarboxylase (Bacterium cadaveris)
Methods Enzymol.
17B
677-681
1971
Bacterium cadaveris
-
Soda, K.; Moriguchi, M.
Crystalline lysine decarboxylase
Biochem. Biophys. Res. Commun.
34
34-39
1969
Bacterium cadaveris
Battersby, A.R.; Murphy, R.; Staunton, J.
Studies of enzyme-mediated reactions. Part 14. Stereochemical course of the formation of cadaverine by decarboxylation of (2S)-lysine with lysine decarboxylase (E.C. 4.1.1.18) from Bacillus cadaveris
J. Chem. Soc. Perkin Trans. I
1982
449-453
1982
Bacterium cadaveris
-
Kim, H.S.; Kim, B.H.; Cho, Y.D.
Purification and characterization of monomeric lysine decarboxylase from soybean (Glycine max) axes
Arch. Biochem. Biophys.
354
40-46
1998
Glycine max
Berkowitz, D.B.; Jahng, W.J.; Pedersen, M.L.
?-VINYLLYSINE AND ?-VINYLARGININE ARE TIME-DEPENDENT INHIBITORS OF THEIR COGNATE DECARBOXYLASES.
Bioorg. Med. Chem. Lett.
6
2151-2156
1996
Bacterium cadaveris
Kikuchi, Y.; Kojima, H.; Tanaka, T.; Takasuka, Y.; Kamio, Y.
Characterization of a second lysine decarboxylase isolated from Escherichia coli
J. Bacteriol.
179
4486-4492
1997
Escherichia coli
Yamamoto, S.; Imamura, T.; Kusaba, K.; Shinoda, S.
Purification and some properties of inducible lysine decarboxylase from Vibrio parahaemolyticus
Chem. Pharm. Bull.
39
3067-3070
1991
Vibrio parahaemolyticus, Vibrio parahaemolyticus AQ 3627
Pegg, A.E.; McGill, S.
Decarboxylation of ornithine and lysine in rat tissues
Biochim. Biophys. Acta
568
416-427
1979
Mus musculus, no activity in Rattus norvegicus
Takatsuka, Y.; Onoda, M.; Sugiyama, T.; Muramoto, K.; Tomita, T.; Kamio, Y.
Novel characteristics of Selenomonas ruminantium lysine decarboxylase capable of decarboxylating both L-lysine and L-ornithine
Biosci. Biotechnol. Biochem.
63
1063-1069
1999
Selenomonas ruminantium (O50657), Selenomonas ruminantium
Takatsuka, Y.; Tomita, T.; Kamio, Y.
Identification of the amino acid residues conferring substrate specificity upon Selenomonas ruminantium lysine decarboxylase
Biosci. Biotechnol. Biochem.
63
1843-1846
1999
Selenomonas ruminantium
Takatsuka, Y.; Yamaguchi, Y.; Ono, M.; Kamio, Y.
Gene cloning and molecular characterization of lysine decarboxylase from Selenomonas ruminantium delineate its evolutionary relationship to ornithine decarboxylases from eukaryotes
J. Bacteriol.
182
6732-6741
2000
Selenomonas ruminantium (O50657), Selenomonas ruminantium
Levine, M.; Progulske-Fox, A.; Denslow, N.D.; Farmerie, W.G.; Smith, D.M.; Swearingen, W.T.; Miller, F.C.; Liang, Z.; Roe, B.A.; Pan, H.Q.
Identification of lysine decarboxylase as a mammalian cell growth inhibitor in Eikenella corrodens: possible role in periodontal disease
Microb. Pathog.
30
179-192
2001
Eikenella corrodens
Snider, J.; Gutsche, I.; Lin, M.; Baby, S.; Cox, B.; Butland, G.; Greenblatt, J.; Emili, A.; Houry, W.A.
Formation of a distinctive complex between the inducible bacterial lysine decarboxylase and a novel AAA+ ATPase
J. Biol. Chem.
281
1532-1546
2006
Escherichia coli
Kukimoto-Niino, M.; Murayama, K.; Kato-Murayama, M.; Idaka, M.; Bessho, Y.; Tatsuguchi, A.; Ushikoshi-Nakayama, R.; Terada, T.; Kuramitsu, S.; Shirouzu, M.; Yokoyama, S.
Crystal structures of possible lysine decarboxylases from Thermus thermophilus HB8
Protein Sci.
13
3038-3042
2004
Thermus thermophilus, Thermus thermophilus HB8 / ATCC 27634 / DSM 579
Tanaka, Y.; Kimura, B.; Takahashi, H.; Watanabe, T.; Obata, H.; Kai, A.; Morozumi, S.; Fujii, T.
Lysine decarboxylase of Vibrio parahaemolyticus: kinetics of transcription and role in acid resistance
J. Appl. Microbiol.
104
1283-1293
2007
Vibrio parahaemolyticus (Q87KT6), Vibrio parahaemolyticus
Kim, J.S.; Choi, S.H.; Lee, J.K.
Lysine decarboxylase expression by Vibrio vulnificus is induced by SoxR in response to superoxide stress
J. Bacteriol.
188
8586-8592
2006
Vibrio vulnificus
Moreau, P.L.
The lysine decarboxylase CadA protects Escherichia coli starved of phosphate against fermentation acids
J. Bacteriol.
189
2249-2261
2007
Escherichia coli
Alexopoulos, E.; Kanjee, U.; Snider, J.; Houry, W.A.; Pai, E.F.
Crystallization and preliminary X-ray analysis of the inducible lysine decarboxylase from Escherichia coli
Acta Crystallogr. Sect. F
64
700-706
2008
Escherichia coli (P0A9H3), Escherichia coli
Ohe, M.; Scoccianti, V.; Bagni, N.; Tassoni, A.; Matsuzaki, S.
Putative occurrence of lysine decarboxylase isoforms in soybean (Glycine max) seedlings
Amino Acids
36
65-70
2009
Glycine max
Tateno, T.; Okada, Y.; Tsuchidate, T.; Tanaka, T.; Fukuda, H.; Kondo, A.
Direct production of cadaverine from soluble starch using Corynebacterium glutamicum coexpressing alpha-amylase and lysine decarboxylase
Appl. Microbiol. Biotechnol.
82
115-121
2009
Escherichia coli
Lafay, B.; Ruimy, R.; de Traubenberg, C.R.; Breittmayer, V.; Gauthier, M.J.; Christen, R.
Roseobacter algicola sp. nov., a new marine bacterium isolated from the phycosphere of the toxin-producing dinoflagellate Prorocentrum lima
Int. J. Syst. Bacteriol.
45
290-296
1995
no activity in Marinovum algicola, no activity in Marinovum algicola ATCC 51442
Ruiz-Ponte, C.; Cilia, V.; Lambert, C.; Nicolas, J.L.
Roseobacter gallaeciensis sp. nov., a new marine bacterium isolated from rearings and collectors of the scallop Pecten maximus
Int. J. Syst. Bacteriol.
48 Pt 2
537-542
1998
no activity in Phaeobacter gallaeciensis BS107
Lau, S.C.; Tsoi, M.M.; Li, X.; Plakhotnikova, I.; Wu, M.; Wong, P.K.; Qian, P.Y.
Loktanella hongkongensis sp. nov., a novel member of the alpha-Proteobacteria originating from marine biofilms in Hong Kong waters
Int. J. Syst. Evol. Microbiol.
54
2281-2284
2004
no activity in Loktanella hongkongensis
Lee, O.O.; Tsoi, M.M.; Li, X.; Wong, P.K.; Qian, P.Y.
Thalassococcus halodurans gen. nov., sp. nov., a novel halotolerant member of the Roseobacter clade isolated from the marine sponge Halichondria panicea at Friday Harbor, USA
Int. J. Syst. Evol. Microbiol.
57
1919-1924
2007
no activity in Thalassobius mediterraneus, no activity in Thalassobius mediterraneus XSM19, no activity in Thalassococcus halodurans, no activity in Thalassococcus halodurans UST050418-052, Shimia aestuarii, Shimia aestuarii JC2049
Alvarez-Ordonez, A.; Fernandez, A.; Bernardo, A.; Lopez, M.
Arginine and lysine decarboxylases and the acid tolerance response of Salmonella typhimurium
Int. J. Food Microbiol.
136
278-282
2010
Salmonella enterica subsp. enterica serovar Typhimurium, Salmonella enterica subsp. enterica serovar Typhimurium CECT 443
Sempruch, C.; Leszczynski, B.; Wojcicka, A.; Makosz, M.; Matok, H.; Chrzanowski, G.
Changes in activity of lysine decarboxylase in winter triticale in response to grain aphid feeding
Acta Biol. Hung.
61
512-515
2010
Secale cereale x Triticum aestivum
Kanjee, U.; Gutsche, I.; Alexopoulos, E.; Zhao, B.; El Bakkouri, M.; Thibault, G.; Liu, K.; Ramachandran, S.; Snider, J.; Pai, E.F.; Houry, W.A.
Linkage between the bacterial acid stress and stringent responses: the structure of the inducible lysine decarboxylase
EMBO J.
30
931-944
2011
Escherichia coli (P0A9H3), Escherichia coli
Teng, Y.; Scott, E.; Van Zeeland, A.; Sanders, J.
The use of L-lysine decarboxylase as a means to separate amino acids by electrodialysis
Green Chem.
13
624-630
2011
Bacterium cadaveris
-
El Bakkouri, M.; Gutsche, I.; Kanjee, U.; Zhao, B.; Yu, M.; Goret, G.; Schoehn, G.; Burmeister, W.P.; Houry, W.A.
Structure of RavA MoxR AAA+ protein reveals the design principles of a molecular cage modulating the inducible lysine decarboxylase activity
Proc. Natl. Acad. Sci. USA
107
22499-22504
2010
Escherichia coli
Romano, A.; Trip, H.; Lolkema, J.S.; Lucas, P.M.
Three-component lysine/ornithine decarboxylation system in Lactobacillus saerimneri 30a
J. Bacteriol.
195
1249-1254
2013
Ligilactobacillus saerimneri 30a, Ligilactobacillus saerimneri 30a ATCC 33222
Sugawara, A.; Matsui, D.; Takahashi, N.; Yamada, M.; Asano, Y.; Isobe, K.
Characterization of a pyridoxal-5'-phosphate-dependent L-lysine decarboxylase/oxidase from Burkholderia sp. AIU 395
J. Biosci. Bioeng.
118
496-501
2014
Burkholderia sp., Burkholderia sp. AIU 395
Lohinai, Z.; Keremi, B.; Szoko, E.; Tabi, T.; Szabo, C.; Tulassay, Z.; Levine, M.
Bacterial lysine decarboxylase influences human dental biofilm lysine content, biofilm accumulation, and subclinical gingival inflammation
J. Periodontol.
83
1048-1056
2012
Eikenella corrodens (Q9Z4R7), Eikenella corrodens
Burrell, M.; Hanfrey, C.C.; Kinch, L.N.; Elliott, K.A.; Michael, A.J.
Evolution of a novel lysine decarboxylase in siderophore biosynthesis
Mol. Microbiol.
86
485-499
2012
Streptomyces coelicolor (Q9L072), Streptomyces coelicolor, Streptomyces coelicolor ATCC BAA-471 (Q9L072)
Shin, J.; Joo, J.C.; Lee, E.; Hyun, S.M.; Kim, H.J.; Park, S.J.; Yang, Y.H.; Park, K.
Characterization of a whole-cell biotransformation using a constitutive lysine decarboxylase from Escherichia coli for the high-level production of cadaverine from industrial grade L-lysine
Appl. Biochem. Biotechnol.
185
909-924
2018
Escherichia coli (P0A9H3), Escherichia coli (P52095), Escherichia coli, Escherichia coli K-12 / MG1655 (P0A9H3), Escherichia coli K-12 / MG1655 (P52095)
Wang, S.; Wan, B.; Zhang, L.; Yang, Y.; Guo, L.H.
In vitro inhibition of lysine decarboxylase activity by organophosphate esters
Biochem. Pharmacol.
92
506-516
2014
Bacterium cadaveris
Li, N.; Chou, H.; Yu, L.; Xu, Y.
Cadaverine production by heterologous expression of Klebsiella oxytoca lysine decarboxylase
Biotechnol. Bioprocess Eng.
19
965-972
2014
Klebsiella oxytoca, Klebsiella oxytoca DSM 6673
-
Wang, C.; Zhang, K.; Zhongjun, C.; Cai, H.; Honggui, W.; Ouyang, P.
Directed evolution and mutagenesis of lysine decarboxylase from Hafnia alvei AS1.1009 to improve its activity toward efficient cadaverine production
Biotechnol. Bioprocess Eng.
20
439-446
2015
Hafnia alvei, Hafnia alvei AS1.1009
-
Hong, E.Y.; Lee, S.G.; Park, B.J.; Lee, J.M.; Yun, H.; Kim, B.G.
Simultaneously enhancing the stability and catalytic activity of multimeric lysine decarboxylase CadA by engineering interface regions for enzymatic production of cadaverine at high concentration of lysine
Biotechnol. J.
12
1700278
2017
Escherichia coli (P0A9H3), Escherichia coli K-12 / B (P0A9H3)
Kou, F.; Zhao, J.; Liu, J.; Sun, C.; Guo, Y.; Tan, Z.; Cheng, F.; Li, Z.; Zheng, P.; Sun, J.
Enhancement of the thermal and alkaline pH stability of Escherichia coli lysine decarboxylase for efficient cadaverine production
Biotechnol. Lett.
40
719-727
2018
Escherichia coli (P0A9H3), Escherichia coli
Kmiec, K.; Sempruch, C.; Chrzanowski, G.; Czerniewicz, P.
The effect of Tetraneura ulmi L. galling process on the activity of amino acid decarboxylases and the content of biogenic amines in Siberian elm tissues
Bull. Entomol. Res.
108
69-76
2018
Ulmus pumila
Li, N.; Yu, L.; Xu, Y.
Heterologous expression and characterization of Klebsiella oxytoca lysine decarboxylase
Chin. J. Biotechnol.
32
527-531
2016
Klebsiella oxytoca (A0A0H3H393), Klebsiella oxytoca, Klebsiella oxytoca ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686 (A0A0H3H393)
Li, N.; Chou, H.; Xu, Y.
Improved cadaverine production from mutant Klebsiella oxytoca lysine decarboxylase
Eng. Life Sci.
16
299-305
2016
Klebsiella oxytoca, Klebsiella oxytoca DSM 6673
-
Kim, H.J.; Kim, Y.H.; Shin, J.H.; Bhatia, S.K.; Sathiyanarayanan, G.; Seo, H.M.; Choi, K.Y.; Yang, Y.H.; Park, K.
Optimization of direct lysine decarboxylase biotransformation for cadaverine production with whole-cell biocatalysts at high lysine concentration
J. Microbiol. Biotechnol.
25
1108-1113
2015
Escherichia coli (P0A9H3), Escherichia coli, Escherichia coli K-12 / MG1655 (P0A9H3)
Kim, Y.H.; Sathiyanarayanan, G.; Kim, H.J.; Bhatia, S.K.; Seo, H.M.; Kim, J.H.; Song, H.S.; Kim, Y.G.; Park, K.; Yang, Y.H.
A Liquid-based colorimetric assay of lysine decarboxylase and its application to enzymatic assay
J. Microbiol. Biotechnol.
25
2110-2115
2015
Burkholderia thailandensis, Klebsiella aerogenes (A0A0H3FP92), Escherichia coli (P52095), Escherichia coli K-12 / MG1655 (P52095), Klebsiella aerogenes ATCC 13048 / DSM 30053 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006 (A0A0H3FP92)
Kim, J.H.; Kim, H.J.; Kim, Y.H.; Jeon, J.M.; Song, H.S.; Kim, J.; No, S.Y.; Shin, J.H.; Choi, K.Y.; Park, K.M.; Yang, Y.H.
Functional study of lysine decarboxylases from Klebsiella pneumoniae in Escherichia coli and application of whole cell bioconversion for cadaverine production
J. Microbiol. Biotechnol.
26
1586-1592
2016
Klebsiella aerogenes (A0A094XEM2), Klebsiella aerogenes (A0A0H3FP92), Klebsiella aerogenes ATCC 13048 / DSM 30053 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006 (A0A0H3FP92)
Park, S.H.; Soetyono, F.; Kim, H.K.
Cadaverine production by using cross-linked enzyme aggregate of Escherichia coli lysine decarboxylase
J. Microbiol. Biotechnol.
27
289-296
2017
Escherichia coli (P0A9H3)
Kou, F.; Zhao, J.; Liu, J.; Shen, J.; Ye, Q.; Zheng, P.; Li, Z.; Sun, J.; Ma, Y.
Characterization of a new lysine decarboxylase from Aliivibrio salmonicida for cadaverine production at alkaline pH
J. Mol. Catal. B
133
S88-S94
2016
Aliivibrio salmonicida (B6EKJ5)
-
Jeong, S.; Yeon, Y.; Choi, E.; Byun, S.; Cho, D.; Kim, I.; Kim, Y.
Alkaliphilic lysine decarboxylases for effective synthesis of cadaverine from L-lysine
Korean J. Chem. Engin.
33
1530-1533
2016
Geobacillus thermodenitrificans
-
Sagong, H.Y.; Son, H.F.; Kim, S.; Kim, Y.H.; Kim, I.K.; Kim, K.J.
Crystal structure and pyridoxal 5-phosphate binding property of lysine decarboxylase from Selenomonas ruminantium
PLoS ONE
11
e0166667
2016
Selenomonas ruminantium (O50657), Selenomonas ruminantium
Sagong, H.Y.; Kim, K.J.
Lysine decarboxylase with an enhanced affinity for pyridoxal 5-phosphate by disulfide bond-mediated spatial reconstitution
PLoS ONE
12
e0170163
2017
Selenomonas ruminantium (O50657), Selenomonas ruminantium
Wang, D.; Zhao, L.; Jiang, J.; Liu, J.; Wang, D.; Yu, X.; Wei, Y.; Ouyang, Z.
Cloning, expression, and functional analysis of lysine decarboxylase in mulberry (Morus alba L.)
Protein Expr. Purif.
151
30-37
2018
Morus alba (A0A2Z4EVE5), Morus alba
Kandiah, E.; Carriel, D.; Perard, J.; Malet, H.; Bacia, M.; Liu, K.; Chan, S.W.; Houry, W.A.; Ollagnier de Choudens, S.; Elsen, S.; Gutsche, I.
Structural insights into the Escherichia coli lysine decarboxylases and molecular determinants of interaction with the AAA+ ATPase RavA
Sci. Rep.
6
24601
2016
Escherichia coli (P0A9H3), Escherichia coli (P52095), Escherichia coli
Kloss, R.; Limberg, M.H.; Mackfeld, U.; Hahn, D.; Gruenberger, A.; Jaeger, V.D.; Krauss, U.; Oldiges, M.; Pohl, M.
Catalytically active inclusion bodies of L-lysine decarboxylase from E. coli for 1,5-diaminopentane production
Sci. Rep.
8
5856
2018
Escherichia coli (P52095), Escherichia coli
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