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Information on EC 4.1.1.15 - glutamate decarboxylase and Organism(s) Rattus norvegicus and UniProt Accession Q05683

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EC Tree
     4 Lyases
         4.1 Carbon-carbon lyases
             4.1.1 Carboxy-lyases
                4.1.1.15 glutamate decarboxylase
IUBMB Comments
A pyridoxal-phosphate protein. The brain enzyme also acts on L-cysteate, 3-sulfino-L-alanine and L-aspartate.
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This record set is specific for:
Rattus norvegicus
UNIPROT: Q05683
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Word Map
The taxonomic range for the selected organisms is: Rattus norvegicus
The expected taxonomic range for this enzyme is: Eukaryota, Bacteria, Archaea
Synonyms
glutamic acid decarboxylase, gad65, gad67, glutamate decarboxylase, glutamic acid decarboxylase 65, glutamic acid decarboxylase 67, gad-65, gad-67, glutamate decarboxylase 67, l-glutamate decarboxylase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
glutamate decarboxylase 65
-
L-glutamate decarboxylase 65
-
65 kDa glutamic acid decarboxylase
-
-
-
-
67 kDa glutamic acid decarboxylase
-
-
-
-
Aspartate 1-decarboxylase
-
-
-
-
Aspartic alpha-decarboxylase
-
-
-
-
Cysteic acid decarboxylase
-
-
-
-
Decarboxylase, glutamate
-
-
-
-
ERT D1
-
-
-
-
GAD-65
-
-
-
-
GAD-67
-
-
-
-
GAD-alpha
-
-
-
-
GAD-beta
-
-
-
-
GAD-gamma
-
-
-
-
GAD67
GADCase
-
-
-
-
gamma-Glutamate decarboxylase
-
-
-
-
GDCase
-
-
-
-
Glutamic acid decarboxylase
glutamic acid decarboxylase 65
-
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glutamic acid decarboxylase 67
glutamic acid decarboxylase-67
-
-
Glutamic decarboxylase
-
-
-
-
L-Aspartate-alpha-decarboxylase
-
-
-
-
L-Glutamate alpha-decarboxylase
-
-
-
-
L-Glutamate decarboxylase
-
-
-
-
L-Glutamic acid decarboxylase
L-Glutamic decarboxylase
-
-
-
-
MGAD
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
decarboxylation
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
L-glutamate 1-carboxy-lyase (4-aminobutanoate-forming)
A pyridoxal-phosphate protein. The brain enzyme also acts on L-cysteate, 3-sulfino-L-alanine and L-aspartate.
CAS REGISTRY NUMBER
COMMENTARY hide
9024-58-2
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
L-glutamate
4-aminobutanoate + CO2
show the reaction diagram
-
-
-
?
L-Asp
?
show the reaction diagram
-
Phe or 6-azauracil decrease specificity for L-Glu and increase specificity to L-Asp
-
-
?
L-Glu
4-Aminobutanoate + CO2
show the reaction diagram
L-glutamate
4-aminobutanoate + CO2
show the reaction diagram
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
L-glutamate
4-aminobutanoate + CO2
show the reaction diagram
-
-
-
?
L-glutamate
4-aminobutanoate + CO2
show the reaction diagram
additional information
?
-
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
pyridoxal 5'-phosphate
-
pyridoxal 5'-phosphate
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
KBr
-
50 mM, enhances GAD activity in renal cortex homogenate
KCl
-
50 mM, enhances GAD activity in renal cortex homogenate
LiCl
-
50 mM, enhances GAD activity in renal cortex homogenate
NaBr
-
50 mM, enhances GAD activity in renal cortex homogenate
NaCl
-
50 mM, enhances GAD activity in renal cortex homogenate
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2,6-pyridine dicarboxylic acid
-
-
2-oxoglutarate
-
-
3,4,5-Trihydroxybenzoic acid
-
-
3,4-dihydroxybenzoic acid
-
-
3-Mercaptopropionic acid
-
-
5,5'-dithiobis(2-nitrobenzoate)
-
-
aminooxyacetic acid
-
-
ATP
-
in presence of leupeptin in freshly prepared homogenates. Inhibition of enzyme from homogenates stored without Triton X-100 for 24 h at 4°C
beta-Methylene-DL-Asp
-
-
EGTA
-
0.5 mM, 20% inhibition
Zinc acetate
-
-
additional information
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
ADP
-
2 mM, activation to about 170% of control without detergent. Activation to about 210% of control in presence of 1% Triton X-100
AMP
-
2 mM, activation to about 125% of control without detergent. Activation to about 140% of control in presence of 1% Triton X-100
ATP
-
2 mM, activation to about 150% of control in presence of 1% Triton, inhibition to 20% of control without detergent
CTP
-
2 mM, activation to about 110% of control without detergent. Activation to about 200% of control in presence of 1% Triton X-100
GTP
-
2 mM, activation to about 125% of control without detergent. Activation to about 190% of control in presence of 1% Triton X-100
UTP
-
2 mM, activation to about 140% of control without detergent. Activation to about 190% of control in presence of 1% Triton X-100
additional information
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
1.59
L-Glu
-
-
0.18 - 1.44
L-glutamate
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
UniProt
Manually annotated by BRENDA team
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
glutamic acid decarboxylase in E18 embryonic hippocampal neurons
Manually annotated by BRENDA team
-
initial segment
Manually annotated by BRENDA team
-
isoform GAD65, mainly in middle and upper portions of villi, GAD65 is not found in goblet cells, and GAD67 is not detected in jejunum at all
Manually annotated by BRENDA team
-
nerve terminal
Manually annotated by BRENDA team
-
part of olfactory cortex
Manually annotated by BRENDA team
-
enzyme degradation kinetics
Manually annotated by BRENDA team
additional information
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
-
palmitoylated GAD65 co-localizes with Rab5 in Golgi membranes and axons, and Rab5 regulates the trafficking of palmitoylated GAD65 from Golgi membranes to axons in an endosomal trafficking pathway
Manually annotated by BRENDA team
-
palmitoylated GAD65 co-localizes with Rab5 in Golgi membranes and axons, and Rab5 regulates the trafficking of palmitoylated GAD65 from Golgi membranes to axons in an endosomal trafficking pathway
Manually annotated by BRENDA team
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
physiological function
isozyme GAD65 is activated by phosphorylation on Thr95. Protein kinase C isoform epsilon is the protein kinase responsible for phosphorylation and regulation of GAD65. Role of phosphorylation of GAD65 in regulation of GABA neurotransmission. Effect of neuronal stimulation on the level of membrane associated GAD (mGAD and GAD65) and soluble GAD (sGAD and GAD67), overview
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
DCE2_RAT
585
0
65402
Swiss-Prot
other Location (Reliability: 1)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
110000
-
gel filtration
120000
-
gradient PAGE
40000
58000
-
SDS-PAGE, N-terminal 69 amino acids truncated form of full-length GAD65 protein
65000
-
full-length GAD65 protein, SDS-PAGE
67000
-
x * 67000, SDS-PAGE
80000
-
x * 40000 + x * 80000, SDS-PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
dimer
-
dimer-forming interactions are mediated mainly by carboxyl-terminal domain
additional information
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
phosphoprotein
isozyme GAD65 is activated by phosphorylation at T95, identification of potential phosphorylation sites S3, S6, T95, and S417 on rGAD65 by tandem MS/MS spectrometry. The effect of phosphorylation on GAD65 can be reversed by treatment with protein phosphatases. Protein kinase C isoform epsilon is the protein kinase responsible for phosphorylation and regulation of GAD65
lipoprotein
-
palmitoylation of cysteines 30 and 45 is critical for post-Golgi trafficking of GAD65 to presynaptic sites and for its relative dendritic exclusion, leading to the presynaptic clustering of GAD65
phosphoprotein
-
protein kinase A is responsible for phosphorylation and inhibition of GAD67 activity, while calcineurin is the phosphatase responsible for dephosphorylation and activation of GAD67
proteolytic modification
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
ATP and phosphate together with chlorides stabilize renal GAD
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
preparation of native enzyme in rat brain synaptosomes, isolation of KCl-stimulated P2'-synaptosomes
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expression of deletion mutant (rGAD65)C45A/DELTA1-38 and (rGAD65)DELTA1-101, expression in COS-7 cells
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expression of the full-length and truncated mutant enzymes, expression analysis
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GAD65 and GAD67 expression analysis in embryo and adult hippocampi
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gene GAD67, cloning of four GAD67 transcripts, GAD67-C1, -C2, -C3, and -C4, produced by alternative splicing and polyadenlyation and translating a GAD protein with truncated pyridoxal 5'-phosphate binding domain, which leads to a lack of glutamate decarboxylase activity, expression in HEK-293 cells
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genes GAd65 and GAD67, expression analysis in brain tissues
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tissue expression pattern of GAD67, overview
-
EXPRESSION
ORGANISM
UNIPROT
LITERATURE
exposure of cell cultures to intermittent hypoxia decreases GAD67 activity. intermittent hypoxia-evoked decrease in GAD67 activity is caused by increased cAMP - protein kinase A - dependent phosphorylation of GAD67, but not as a result of changes in either GAD67 mRNA or protein expression
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GAD65 gene expression is dynamically regulated at multiple levels during post-natal testis maturation, GAD65 protein is presented in Leydig cells of day 1 testis, primary spermatocytes and spermatids of postnatal of day 90 testis
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in the herpes simplex virus-GAD group, GAD67 mRNA and protein levels are significantly increased in the L6-S1 dorsal root ganglia
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subchronic L-DOPA administration (6 mg/kg) is paralleled by a significant increase in mRNA levels of the two isoforms of glutamic acid decarboxylase (GAD67 and GAD65), 1 mg/kg 2-methyl-6-(phenylethynyl)-pyridine completely reverses the effects of L-DOPA on GAD67 and GAD65 and reduces the increases in mRNA levels
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
analysis
-
most important application of glutamate decarboxylase antibodies is to identify those neurons and neuronal projections that use 4-aminobutanoate as their neurotransmitter by immunocytochemical visualization
medicine
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Denner, L.A.; Wei, S.C.; Lin, H.S.; Lin, C.T.; Wu, J.Y.
Brain L-glutamate decarboxylase: purification and subunit structure
Proc. Natl. Acad. Sci. USA
84
668-672
1987
Rattus norvegicus
Manually annotated by BRENDA team
Wu, J.Y.; Denner, L.; Lin, C.T.; Song, G.
L-Glutamate decarboxylase from brain
Methods Enzymol.
113
3-10
1985
Rattus norvegicus
Manually annotated by BRENDA team
Yamaguchi, T.; Matsumura, Y.
Purification of L-glutamate decarboxylase by affinity chromatography
Biochim. Biophys. Acta
481
706-711
1977
Rattus norvegicus
Manually annotated by BRENDA team
Tunnicliff, G.
Action of inhibitors on brain glutamate decarboxylase
Int. J. Biochem.
27
1235-1241
1990
Gallus gallus, Mus musculus, Rattus norvegicus, Sus scrofa
Manually annotated by BRENDA team
Martin, D.L.; Martin, S.B.; Wu, S.J.; Espina, N.
Regulatory properties of brain glutamate decarboxylase (GAD): the apoenzyme of GAD is present principally as the smaller of two molecular forms of GAD in brain
J. Neurosci.
11
2725-2731
1991
Rattus norvegicus
Manually annotated by BRENDA team
Chen, C.H.; Battaglioli, G.; Martin, D.L.; Hobart, S.A.; Colon, W.
Distinctive interactions in the holoenzyme formation for two isoforms of glutamate decarboxylase
Biochim. Biophys. Acta
1645
63-71
2003
Rattus norvegicus
Manually annotated by BRENDA team
Tursky, T.; Bandzuchova, E.
An endogenous activator of renal glutamic acid decarboxylase effects of adenosine triphosphate, phosphate and chloride on the activity of this enzyme
Eur. J. Biochem.
262
696-703
1999
Rattus norvegicus
Manually annotated by BRENDA team
Kanaani, J.; Lissin, D.; Kash, S.F.; Baekkeskov, S.
The hydrophilic isoform of glutamate decarboxylase, GAD67, is targeted to membranes and nerve terminals independent of dimerization with the hydrophobic membrane-anchored isoform, GAD65
J. Biol. Chem.
274
37200-37209
1999
Rattus norvegicus
Manually annotated by BRENDA team
Martin, D.L.; Liu, H.; Martin, S.B.; Wu, S.J.
Structural features and regulatory properties of the brain glutamate decarboxylases
Neurochem. Int.
37
111-119
2000
Rattus norvegicus
Manually annotated by BRENDA team
Battaglioli, G.; Liu, H.; Hauer, C.R.; Martin, D.L.
Glutamate decarboxylase: loss of N-terminal segment does not affect homodimerization and determination of the oxidation state of cysteine residues
Neurochem. Res.
30
989-1001
2005
Rattus norvegicus
Manually annotated by BRENDA team
Wang, F.Y.; Watanabe, M.; Zhu, R.M.; Maemura, K.
Characteristic expression of gamma-aminobutyric acid and glutamate decarboxylase in rat jejunum and its relation to differentiation of epithelial cells
World J. Gastroenterol.
10
3608-3611
2004
Rattus norvegicus
Manually annotated by BRENDA team
Freichel, C.; Potschka, H.; Ebert, U.; Brandt, C.; Loescher, W.
Acute changes in the neuronal expression of GABA and glutamate decarboxylase isoforms in the rat piriform cortex following status epilepticus
Neuroscience
141
2177-2194
2006
Rattus norvegicus
Manually annotated by BRENDA team
Sha, D.; Jin, Y.; Wu, H.; Wei, J.; Lin, C.H.; Lee, Y.H.; Buddhala, C.; Kuchay, S.; Chishti, A.H.; Wu, J.Y.
Role of mu-calpain in proteolytic cleavage of brain L-glutamic acid decarboxylase
Brain Res.
1207
9-18
2008
Homo sapiens, Mus musculus, Rattus norvegicus
Manually annotated by BRENDA team
Schlosser, M.; Walschus, U.; Kloeting, I.; Walther, R.
Determination of glutamic acid decarboxylase (GAD65) in pancreatic islets and its in vitro and in vivo degradation kinetics in serum using a highly sensitive enzyme immunoassay
Dis. Markers
24
191-198
2008
Homo sapiens, Mus musculus, Rattus norvegicus, Sus scrofa, Rattus norvegicus LEW-1A
Manually annotated by BRENDA team
Luo, Y.; Lathia, J.; Mughal, M.; Mattson, M.P.
SDF1alpha/CXCR4 signaling, via ERKs and the transcription factor Egr1, induces expression of a 67-kDa form of glutamic acid decarboxylase in embryonic hippocampal neurons
J. Biol. Chem.
283
24789-24800
2008
Rattus norvegicus
Manually annotated by BRENDA team
Hill, L.E.; Droste, S.K.; Nutt, D.J.; Linthorst, A.C.; Reul, J.M.
Voluntary exercise alters GABAA receptor subunit and glutamic acid decarboxylase-67 gene expression in the rat forebrain
J. Psychopharmacol. (Oxford)
24
745-756
2010
Rattus norvegicus
Manually annotated by BRENDA team
Liu, H.; Wang, Z.; Li, S.; Zhang, Y.; Yan, Y.C.; Li, Y.P.
Utilization of an intron located polyadenlyation site resulted in four novel glutamate decarboxylase transcripts
Mol. Biol. Rep.
36
1469-1474
2008
Rattus norvegicus
Manually annotated by BRENDA team
Wei, J.; Wu, J.Y.
Post-translational regulation of L-glutamic acid decarboxylase in the brain
Neurochem. Res.
33
1459-1465
2008
Mus musculus, Rattus norvegicus, Homo sapiens (Q05329), Homo sapiens (Q99259)
Manually annotated by BRENDA team
Yamamoto, N.; Soghomonian, J.
Time-course of SKF-81297-induced increase in glutamic acid decarboxylase 65 and 67 mRNA levels in striatonigral neurons and decrease in GABAA receptor alpha 1 subunit mRNA levels in the substantia nigra, pars reticulata, in adult rats with a unilateral 6-hydroxydopamine lesion
Neuroscience
154
1088-1099
2008
Rattus norvegicus
Manually annotated by BRENDA team
El-Faramawy, Y.A.; El-Banouby, M.H.; Sergeev, P.; Mortagy, A.K.; Amer, M.S.; Abdel-Tawab, A.M.
Changes in glutamate decarboxylase enzyme activity and tau-protein phosphorylation in the hippocampus of old rats exposed to chronic mild stress: Reversal with the neuronal nitric oxide synthase inhibitor 7-nitroindazole
Pharmacol. Biochem. Behav.
91
339-344
2009
Rattus norvegicus
Manually annotated by BRENDA team
Liu, H.; Li, S.; Zhang, Y.; Yan, Y.; Li, Y.
Dynamic regulation of glutamic acid decarboxylase 65 gene expression in rat testis
Acta Biochim. Biophys. Sin.
41
545-553
2009
Rattus norvegicus
Manually annotated by BRENDA team
Miyazato, M.; Sugaya, K.; Goins, W.F.; Wolfe, D.; Goss, J.R.; Chancellor, M.B.; de Groat, W.C.; Glorioso, J.C.; Yoshimura, N.
Herpes simplex virus vector-mediated gene delivery of glutamic acid decarboxylase reduces detrusor overactivity in spinal cord-injured rats
Gene Ther.
16
660-668
2009
Rattus norvegicus
Manually annotated by BRENDA team
Yamamoto, N.; Soghomonian, J.J.
Metabotropic glutamate mGluR5 receptor blockade opposes abnormal involuntary movements and the increases in glutamic acid decarboxylase mRNA levels induced by l-DOPA in striatal neurons of 6-hydroxydopamine-lesioned rats
Neuroscience
163
1171-1180
2009
Rattus norvegicus
Manually annotated by BRENDA team
Raghuraman, G.; Prabhakar, N.R.; Kumar, G.K.
Post-translational modification of glutamic acid decarboxylase 67 by intermittent hypoxia: evidence for the involvement of dopamine D1 receptor signaling
J. Neurochem.
115
1568-1578
2010
Rattus norvegicus
Manually annotated by BRENDA team
Chou, C.C.; Modi, J.P.; Wang, C.Y.; Hsu, P.C.; Lee, Y.H.; Huang, K.F.; Wang, A.H.; Nan, C.; Huang, X.; Prentice, H.; Wei, J.; Wu, J.Y.
Activation of brain L-glutamate decarboxylase 65 isoform (GAD65) by phosphorylation at threonine 95 (T95)
Mol. Neurobiol.
54
866-873
2017
Homo sapiens (Q05329), Homo sapiens (Q99259), Homo sapiens, Rattus norvegicus (Q05683), Rattus norvegicus Sprague Dawley (Q05683)
Manually annotated by BRENDA team