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Information on EC 3.4.23.20 - Penicillopepsin and Organism(s) Penicillium janthinellum and UniProt Accession P78735

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EC Tree
     3 Hydrolases
         3.4 Acting on peptide bonds (peptidases)
             3.4.23 Aspartic endopeptidases
                3.4.23.20 Penicillopepsin
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Select one or more organisms in this record: ?
This record set is specific for:
Penicillium janthinellum
UNIPROT: P78735 not found.
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Word Map
The taxonomic range for the selected organisms is: Penicillium janthinellum
The enzyme appears in selected viruses and cellular organisms
Reaction Schemes
Hydrolysis of proteins with broad specificity similar to that of pepsin A, preferring hydrophobic residues at P1 and P1', but also cleaving Gly20-/-Glu in the B chain of insulin. Clots milk, and activates trypsinogen
Synonyms
penicillopepsin, peptidase a, mold kinase, acid protease a, penicillopepsin-jt2, penicillopepsin-jt1, penicillium janthinellum acid proteinase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
penicillopepsin-JT2
-
Acid protease A
-
-
-
-
pencillopepsin-JT1
-
native enzyme
pencillopepsin-JT2
-
recombinant enzyme
Penicillium citrinum acid proteinase
-
-
-
-
Penicillium cyclopium acid proteinase
-
-
-
-
Penicillium expansum acid proteinase
-
-
-
-
Penicillium janthinellum acid proteinase
-
-
-
-
Penicillium janthinellum aspartic proteinase
penicillium kinase
-
-
Penicillium roqueforti acid proteinase
-
-
-
-
penicillopepsin-JT1
-
-
penicillopepsin-JT3
-
Peptidase A
Proteinase, Penicillium aspartic
-
-
-
-
Proteinase, Penicillium caseicolum aspartic
-
-
-
-
Proteinase, Penicillium citrinum aspartic
-
-
-
-
Proteinase, Penicillium cyclopium acid
-
-
-
-
Proteinase, Penicillium duponti aspartic
-
-
-
-
Proteinase, Penicillium expansum aspartic
-
-
-
-
Proteinase, Penicillium janthinellum acid
-
-
-
-
Proteinase, Penicillium roqueforti aspartic
-
-
-
-
additional information
CAS REGISTRY NUMBER
COMMENTARY hide
9074-08-2
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
Ac-(Ala)n-Lys-Nph-(Ala)m-amide + H2O
Ac-(Ala)n-Lys + Nph-(Ala)m-amide
show the reaction diagram
-
-
-
?
Ac-(Ala)m-Lys-(NO2)Phe-(Ala)n amide + H2O
?
show the reaction diagram
-
-
-
-
?
Ac-(Ala)n-Lys-Nph-(Ala)m-amide + H2O
Ac-(Ala)n-Lys + Nph-(Ala)m-amide
show the reaction diagram
-
-
-
?
Ac-Ala-Ala-Ala-Lys-(NO2)Phe-Ala-Ala-amide + H2O
?
show the reaction diagram
Ac-Ala-Ala-Lys-(4-nitro)Phe-Ala-Ala amide + H2O
?
show the reaction diagram
-
-
-
-
?
Ac-Ala-Ala-Lys-(4-nitro)Phe-Ala-Ala-Ala amide + H2O
Ac-Ala-Ala-Lys + (4-nitro)Phe-Ala-Ala-Ala amide
show the reaction diagram
-
-
-
-
?
Ac-Ala-Ala-Lys-(NO2)Phe-Ala-Ala-amide + H2O
?
show the reaction diagram
-
-
-
?
Ac-Ala-Ala-Lys-(NO2)Phe-Ala-amide + H2O
?
show the reaction diagram
-
-
-
?
Ac-Ala-Ala-Lys-(NO2)Phe-amide + H2O
?
show the reaction diagram
Ac-Ala-Lys-(NO2)Phe-Ala-Ala-amide + H2O
?
show the reaction diagram
-
-
-
?
Ac-Ala-Lys-(NO2)Phe-Ala-amide + H2O
?
show the reaction diagram
-
-
-
?
Ac-Ala-Lys-(NO2)Phe-amide + H2O
?
show the reaction diagram
Ac-Ala-Lys-Ala-(NO2)Phe-amide + H2O
?
show the reaction diagram
-
-
-
-
?
Ac-Gly-Lys-(4-nitro)Phe-Ala-Ala amide + H2O
Ac-Gly-Lys + (4-nitro)Phe-Ala-Ala amide
show the reaction diagram
-
-
-
-
?
Ac-Lys 4-nitrophenyl amide + H2O
?
show the reaction diagram
-
-
-
-
?
Ac-Lys-(NO2)Phe- Ala-amide + H2O
?
show the reaction diagram
-
-
-
?
Ac-Lys-(NO2)Phe-Ala-Ala-amide + H2O
?
show the reaction diagram
-
-
-
?
Ac-Lys-(NO2)Phe-amide + H2O
?
show the reaction diagram
Ac-Val-Lys-(4-nitro)Phe-Ala amide + H2O
Ac-Val-Lys + (4-nitro)Phe-Ala amide
show the reaction diagram
-
-
-
-
?
Ac-Xaa-Lys-(NO2)Phe-Ala-Ala amide + H2O
?
show the reaction diagram
-
-
-
-
?
B-chain of S-sulfo-insulin + H2O
?
show the reaction diagram
-
-
-
-
?
Bovine serum albumin + H2O
?
show the reaction diagram
-
cleaves 15% of the peptide bonds
-
-
?
bovine trypsinogen + H2O
?
show the reaction diagram
-
-
-
-
?
FVNQHLCGSHLVEALYLVCGERGFFYTPKA + H2O
FVNQHLCGSHLVEALYLVCG + ERGFFYTPKA
show the reaction diagram
i.e. insulin B chain, cleavage site specificity
-
-
?
Leu-Ser-(4-nitro)Phe-Nle-Ala-Leu methyl ester + H2O
?
show the reaction diagram
-
-
-
-
?
Pro-Thr-Glu-Phe-(4-nitro)Phe-Arg-Leu + H2O
Pro-Thr-Glu-Phe + (4-nitro)Phe-Arg-Leu
show the reaction diagram
-
-
-
?
Trypsinogen + H2O
?
show the reaction diagram
trypsinogen + H2O
trypsin + propeptide Val(Asn)4-Lys-OH
show the reaction diagram
substrate from Bos taurus, rapid activation
-
-
?
additional information
?
-
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
1,2-epoxy-3-(4-nitrophenoxy)propane
Benzyloxycarbonyl-Gln-Tyr
-
-
Benzyloxycarbonyl-Glu
-
-
Benzyloxycarbonyl-Val-Tyr
-
-
Diazoacetyl DL-norleucine methyl ester
-
in presence of Cu2+
Diazoacetyl-DL-norleucine methyl ester
i.e. DAN, active-site directed inhibitor
Difluorostatine- and difluorostatone-containing peptides
-
-
-
isovaleryl-Val-statine-ethoxy
pepstatin analogue
Isovaleryl-Val-Val-statyl ethyl ester
-
-
Isovaleryl-Val-Val-statyl-Ala ethyl ester
-
-
K2PtCl6
-
partial
Leu-Gly-Leu
-
inhibits trypsinogen activation, activates cleavage of Leu-Tyr amide
methyl 10-hydroxy-6-[[N-(3-methylbutanoyl)valyl]amino]-9-(2-methylpropyl)-4,7-dioxo-11-oxa-3,8-diaza-10-phosphabicyclo[12.3.1]octadeca-1(18),14,16-triene-12-carboxylate 10-oxide
methyl cyclo[(2S)-2-[[(1R)-1-(N-(l-N-(3-methylbutanoyl)valyl-L-aspartyl)amino)-3-methylbutyl]hydroxyphosphinyloxy]-3-(3-aminomethyl)] phenylpropanoate
phosphonate-based macrocycle PPi4, macrocyclic pentapeptide inhibitor
methyl cyclo[(2S)-2-[[(1R)-1-(N-(l-N-(3-methylbutanoyl)valyl-L-aspartyl)amino)-3-methylbutyl]ydroxyphosphinyloxy]-3-(3-aminomethyl)] phenylpropanoate
-
N-(3-methylbutanoyl)valyl-N1-(1-[hydroxy[(1-methoxy-1-oxo-3-phenylpropan-2-yl)oxy]phosphoryl]-3-methylbutyl)aspartamide
-
Phosphorus-based peptide analogues
-
-
-
additional information
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
Leu-Gly-Leu
-
inhibits trypsinogen activation, activates cleavage of Leu-Tyr amide
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.075
Ac-Ala-Ala-Ala-Lys-(4-nitro)-Phe-Ala-Ala amide
-
pH 5.5 (pH-optimum for kcat)
0.39 - 0.68
Ac-Ala-Ala-Ala-Lys-(NO2)Phe-Ala-Ala-amide
0.25
Ac-Ala-Ala-Lys-(4-nitro)Phe amide
-
pH 4.5 (pH optimum for kcat)
0.078 - 0.44
Ac-Ala-Ala-Lys-(4-nitro)Phe-Ala-Ala amide
0.32 - 0.59
Ac-Ala-Ala-Lys-(NO2)Phe-Ala-Ala-amide
0.35 - 0.71
Ac-Ala-Ala-Lys-(NO2)Phe-Ala-amide
0.37 - 0.8
Ac-Ala-Ala-Lys-(NO2)Phe-amide
0.41
Ac-Ala-Lys-(4-nitro)Phe amide
-
pH 4.3 (optimum for kcat)
0.41 - 0.6
Ac-Ala-Lys-(NO2)Phe-Ala-Ala-amide
0.3 - 0.83
Ac-Ala-Lys-(NO2)Phe-Ala-amide
0.4 - 0.75
Ac-Ala-Lys-(NO2)Phe-amide
0.07
Ac-Gly-Lys-(4-nitro)Phe-Ala-Ala amide
-
pH 4.5
0.22
Ac-Lys 4-nitrophenyl amide
-
-
0.6
Ac-Lys-(4-nitro)Phe amide
-
pH 3.8-4.2 (optimum for kcat)
0.21 - 0.77
Ac-Lys-(NO2)Phe-Ala-Ala-amide
0.5 - 0.83
Ac-Lys-(NO2)Phe-Ala-amide
0.4 - 0.65
Ac-Lys-(NO2)Phe-amide
0.017
Ac-Val-Lys-(4-nitro)Phe-Ala amide
-
-
0.004 - 0.01
Leu-Ser-(4-nitro)Phe-Nle-Ala-Leu methyl ester
0.005
Pro-Thr-Glu-Phe-(4-nitro)Phe-Arg-Leu
-
-
0.0076
Trypsinogen
-
-
additional information
additional information
-
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.35 - 34
Ac-Ala-Ala-Ala-Lys-(NO2)Phe-Ala-Ala-amide
28.8 - 47
Ac-Ala-Ala-Lys-(4-nitro)Phe-Ala-Ala amide
45
Ac-Ala-Ala-Lys-(4-nitro)Phe-Ala-Ala-Ala amide
-
pH 5.5 (pH-optimum for kcat)
0.3 - 40
Ac-Ala-Ala-Lys-(NO2)Phe-Ala-Ala-amide
0.09 - 15
Ac-Ala-Ala-Lys-(NO2)Phe-Ala-amide
0.0019 - 0.36
Ac-Ala-Ala-Lys-(NO2)Phe-amide
0.021
Ac-Ala-Lys-(4-nitro)Phe amide
-
pH 4.3 (pH-optimum for kcat)
0.15 - 0.45
Ac-Ala-Lys-(NO2)Phe-Ala-Ala-amide
0.046 - 0.6
Ac-Ala-Lys-(NO2)Phe-Ala-amide
0.003 - 0.0054
Ac-Ala-Lys-(NO2)Phe-amide
0.003
Ac-Ala-Lys-Ala-(NO2)Phe-amide
-
pH 5.0, 25°C, mutant T219S
0.01
Ac-Lys 4-nitrophenyl amide
-
pH 5.5
0.026
Ac-Lys-(4-nitro)Phe amide
-
pH 3.8-4.2 (pH-optimum for kcat)
0.12 - 0.43
Ac-Lys-(NO2)Phe-Ala-Ala-amide
0.042 - 0.4
Ac-Lys-(NO2)Phe-Ala-amide
0.0016 - 0.005
Ac-Lys-(NO2)Phe-amide
5
bovine trypsinogen
-
-
-
6.4 - 11.4
Leu-Ser-(4-nitro)Phe-Nle-Ala-Leu methyl ester
37.3
Pro-Thr-Glu-Phe-(4-nitro)Phe-Arg-Leu
-
-
additional information
additional information
-
Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0000001
methyl cyclo[(2S)-2-[[(1R)-1-(N-(l-N-(3-methylbutanoyl)valyl-L-aspartyl)amino)-3-methylbutyl]ydroxyphosphinyloxy]-3-(3-aminomethyl)] phenylpropanoate
pH 4.6, macrocyclic pentapeptide inhibitor
0.00000001 - 0.0018
pepstatin
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
-
-
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
2.6
-
bovine serum albumin
3.4
-
trypsinogen
3.6
-
hydrolysis and transpeptidation of small substrates
pI VALUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
3
below, penicillopepsin-JT1
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
precursor; penicillopepsin-JT2
SwissProt
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
PEPA2_PENJA
394
0
40840
Swiss-Prot
Secretory Pathway (Reliability: 1)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
32000
-
Penicillium janthinellum
33422
x * 33422, amino acid sequence calculation
33700 - 34000
-
mass spectrometry
additional information
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
?
x * 33422, amino acid sequence calculation
additional information
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
proteolytic modification
autoprocessing of the zymogen releasing the propeptide Val(Asn)4-Lys
glycoprotein
-
PencillopepsinJT2, glycosylated form of the active enzyme
proteolytic modification
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
crystal structure at: 1.8 A
-
crystal structure in complex with inhibitor PPi3, monoclinic space group C2, a : 96.24 A, b : 46.47 A, c : 65.38 A, crystal structure in complex with inhibitor PPi4, monoclinic space group C2, a : 96.98 A, b : 46.65 A, c : 65.71 A
crystal structure of native penicillopepsin and of its complex with a synthetic analogue of the inhibitor pepstatin at 1.8 A resolution
-
crystallographic analysis of transition state mimics bound to penicillopepsin
-
difluorostatine- and difluorostatone-containing peptides
-
phosphorus-containing peptide analogues
-
purified penicillopepsin-JT1, free or bound to difluorostatine- and difluorostatone-containing peptides, X-ray diffraction structure determination and analysis at 0.95-2.8 A resolution
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
T219A
site-directed mutagenesis, comparison of substrate binding to the wild-type enzyme
T219G
site-directed mutagenesis, comparison of substrate binding to the wild-type enzyme
T219S
site-directed mutagenesis, comparison of substrate binding to the wild-type enzyme
T219V
site-directed mutagenesis, comparison of substrate binding to the wild-type enzyme
T219A
-
constructed by cassette insertion
T219G
-
constructed by cassette insertion
T219S
-
constructed by cassette insertion
T219V
-
constructed by cassette insertion
pH STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
2 - 7
-
rapid loss of activity below pH 2.0 and above pH 7.0
30585
3
-
37°C, slow inactivation
30585
4.9
-
55°C, 1 h, stable
30585
6.1
-
37°C, slow inactivation
30585
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
37
-
pH 3.0 or pH 6.1, slow inactivation
55
-
pH 4.9, 1 h, stable
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
Room temperature, pH 4.9, several days
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
penicillopepsin-JT1 to homogeneity
recombinant enzyme
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
penicillopepsin-JT2, DNA and amino acid sequence determination and analysis
gene pepA, nucleotide sequence determined, inserted into expression vector pGPT-pyrG1, expressed in an aspartic proteinase-free strain of Aspergillus niger var. awamori
-
penicillopepsin-JT1, DNA and amino acid sequence determination and analysis
penicillopepsin-JT3, DNA and amino acid sequence determination and analysis
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
medicine
design of inhibitors with enhanced potency against proteolytic enzymes has many applications for treatment of human diseases
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Hofmann, T.
Penicillopepsin
Methods Enzymol.
45
434-452
1976
Penicillium janthinellum
Manually annotated by BRENDA team
Hsu, I.N.; Delbaere, L.T.J.; James, M.N.G.
Penicillopepsin from Penicillium janthinellum crystal structure at 2.8 A and sequence homology with porcine pepsin
Nature
266
140-145
1977
Penicillium janthinellum
Manually annotated by BRENDA team
Hofmann, T.; Allen, B.; Bendiner, M.; Blum, M.; Cunningham, A.
Effect of secondary substrate binding in penicillopepsin: contributions of subsites S3 and S2 to kcat
Biochemistry
27
1140-1146
1988
Penicillium janthinellum
Manually annotated by BRENDA team
Dunn, B.M.; Jimenez, M.; Parten, B.F.; Valler, M.J.; Rolph, C.E.; Kay, J.
A systematic series of synthetic chromophoric substrates for aspartic proteinases
Biochem. J.
237
899-906
1986
Penicillium janthinellum
Manually annotated by BRENDA team
James, M.N.G.; Hsu, I.N.; Delbaere, L.T.J.
Mechanism of acid protease catalysis based on the crystal structure of penicillopepsin
Nature
267
808-813
1977
Penicillium janthinellum
Manually annotated by BRENDA team
Mains, G.; Hofmann, T.
The inactivation of penicillopepsin with 1,2-epoxy-3-(p-nitrophenoxy) propane, an active-site directed reagent
Can. J. Biochem.
52
1018-1023
1974
Penicillium janthinellum
Manually annotated by BRENDA team
Wang, T.T.; Hofmann, T.
Acyl and amino intermediates in penicillopepsin-catalysed reactions and activation by nonsubstrate peptides
Can. J. Biochem.
55
286-294
1977
Penicillium janthinellum
Manually annotated by BRENDA team
Hsu, I.N.; Hofman, T.; Nyburg, S.C.
The crystal structure of penicillopesin at 6 A resolution
Biochem. Biophys. Res. Commun.
72
363-368
1976
Penicillium janthinellum
Manually annotated by BRENDA team
Blum, M.; Cunningham, A.; Bendiner, M.; Hofmann, T.
Penicillopepsin, the aspartic proteinase from Penicillium janthinellum: substrate-binding effects and intermediates in transpeptidation reactions
Biochem. Soc. Trans.
13
1044-1046
1985
Penicillium janthinellum
Manually annotated by BRENDA team
James, M.N.G.; Sielecki, A.R.
Stereochemical analysis of peptide bond hydrolysis catalyzed by the aspartic proteinase penicillopepsin
Biochemistry
24
3701-3713
1985
Penicillium janthinellum
Manually annotated by BRENDA team
Hofmann, T.; Hodges, R.S.; James, M.N.G.
Effect of pH on the activities of penicillopepsin and Rhizopus pepsin and a proposal for the productive substrate binding mode in penicillopepsin
Biochemistry
23
635-643
1984
Penicillium janthinellum
Manually annotated by BRENDA team
James, M.N.G.; Sielecki, A.R.
Structure and refinement of penicillopepsin at 1.8 A resolution
J. Mol. Biol.
163
299-361
1983
Penicillium janthinellum
Manually annotated by BRENDA team
James, M.N.G.; Sielecki, A.R.; Hayakawa, K.; Gelb, M.H.
Crystallographic analysis of transition state mimics bound to penicillopepsin: difluorostatine- and difluorostatone-containing peptides
Biochemistry
31
3872-3886
1992
Penicillium janthinellum
Manually annotated by BRENDA team
Fraser, M.E.; Strynadka, N.C.J.; Bartlett, P.A.; Hanson, J.E.; James, M.N.G.
Crystallographic analysis of transition-state mimics bound to penicillopepsin: phosphorus-containing peptide analogues
Biochemistry
31
5201-5214
1992
Penicillium janthinellum
Manually annotated by BRENDA team
Khan, A.R.; Parrish, J.C.; Fraser, M.E.; Smith, W.W.; Bartlett, P.A.; James, M.N.G.
Lowering the entropic barrier for binding conformationally flexible inhibitors to enzymes
Biochemistry
37
16839-16845
1998
Penicillium janthinellum (P00798)
Manually annotated by BRENDA team
Cao, Q.N.; Stubbs, M.; Ngo, K.Q.; Ward, M.; Cunningham, A.; Pai, E.F.; Tu, G.C.; Hofmann, T.
Penicillopepsin-JT2, a recombinant enzyme from Penicillium janthinellum and the contribution of a hydrogen bond in subsite S3 to k(cat)
Protein Sci.
9
991-1001
2000
Penicillium janthinellum, Penicillium janthinellum NRRL 905
Manually annotated by BRENDA team
Hofmann, T.
Penicillopepsin
Handbook of Proteolytic Enzymes (Barrett, J. ; Rawlings, N. D. ; Woessner, J. F. , eds. )
1
99-104
2004
Penicillium camemberti, Penicillium duponti, Penicillium duponti K1014, Penicillium janthinellum, Penicillium janthinellum (P78735), Penicillium janthinellum (Q9HEZ3), Penicillium roqueforti
-
Manually annotated by BRENDA team
Vidossich, P.; Carloni, P.
Binding of phosphinate and phosphonate inhibitors to aspartic proteases: a first-principles study
J. Phys. Chem. B
110
1437-1442
2006
Penicillium janthinellum
Manually annotated by BRENDA team
Suarez, D.; Diaz, N.
Ligand strain and entropic effects on the binding of macrocyclic and linear inhibitors molecular modeling of penicillopepsin complexes
J. Chem. Inf. Model.
57
2045-2055
2017
Penicillium janthinellum (P00798)
Manually annotated by BRENDA team