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2.25 - 3.67
1,3-1,4-beta-D-glucan
-
10100
lichenan
-
pH 6.0-7.0, 45°C, mutant TFsW203F
2.25
1,3-1,4-beta-D-glucan
wild-type, expressed in Escherichia coli, pH 5.0, 50°C
-
2.44
1,3-1,4-beta-D-glucan
mutant V18Y, expressed in Escherichia coli, pH 5.0, 50°C
-
3.29
1,3-1,4-beta-D-glucan
mutant V18Y/W203Y, expressed in Escherichia coli, pH 5.0, 50°C
-
3.67
1,3-1,4-beta-D-glucan
mutant W203Y, expressed in Escherichia coli, pH 5.0, 50°C
-
5.8
lichenan
mutant E11L, 45°C, pH 5.0
44
lichenan
mutant W203R, calculated as D-glucose units released from lichenan
109
lichenan
mutant Q70I, calculated as D-glucose units released from lichenan
131
lichenan
mutant F40I, 45°C, pH not specified in the publication
154
lichenan
mutant R137Q, 40°C, pH not specified in the publication
244
lichenan
mutant Q70A, calculated as D-glucose units released from lichenan
322
lichenan
mutant Y42L, 45°C, pH not specified in the publication
349
lichenan
mutant R137M, 40°C, pH not specified in the publication
371
lichenan
mutant Q70N, calculated as D-glucose units released from lichenan
401
lichenan
mutant L62G, 45°C, pH not specified in the publication
504
lichenan
mutant N72Q, calculated as D-glucose units released from lichenan
608
lichenan
mutant G207-, calculated as D-glucose units released from lichenan
639
lichenan
mutant Q70D, calculated as D-glucose units released from lichenan
641
lichenan
mutant Q70E, calculated as D-glucose units released from lichenan
699
lichenan
mutant D206R, calculated as D-glucose units released from lichenan
756
lichenan
mutant N139A, 45°C, pH not specified in the publication
785
lichenan
mutant E85I, calculated as D-glucose units released from lichenan
820
lichenan
mutant N72A, calculated as D-glucose units released from lichenan
865
lichenan
mutant F205L, calculated as D-glucose units released from lichenan
883
lichenan
mutant D202L, calculated as D-glucose units released from lichenan
911
lichenan
mutant K200M, calculated as D-glucose units released from lichenan
942
lichenan
mutant N208G, calculated as D-glucose units released from lichenan
992
lichenan
mutant E47I, 45°C, pH not specified in the publication
1037
lichenan
mutant R209M, calculated as D-glucose units released from lichenan
1141
lichenan
mutant K200F, calculated as D-glucose units released from lichenan
1277
lichenan
mutant T204F, calculated as D-glucose units released from lichenan
1296
lichenan
wild-type, calculated as D-glucose units released from lichenan
1353
lichenan
mutant G201S, calculated as D-glucose units released from lichenan
1422
lichenan
mutant E85D, calculated as D-glucose units released from lichenan
1435
lichenan
mutant Q70R, calculated as D-glucose units released from lichenan
1788
lichenan
mutant K64A, 50°C, pH not specified in the publication
1833
lichenan
mutant K64M, 50°C, pH not specified in the publication
1860
lichenan
mutant D206N, calculated as D-glucose units released from lichenan
1955
lichenan
mutant G207N, calculated as D-glucose units released from lichenan
2060
lichenan
mutant D206M, calculated as D-glucose units released from lichenan
2170
lichenan
mutant N44L, 55°C, pH not specified in the publication
2562
lichenan
mutant D202N, calculated as D-glucose units released from lichenan
2663
lichenan
mutant Q81N, calculated as D-glucose units released from lichenan
2924
lichenan
pH 5.0, 50°C, wild-type enzyme, calculated as reducing sugar released from substrate
3026
lichenan
mutant N44Q, 55°C, pH not specified in the publication
3224
lichenan
pH 5.0, 50°C, mutant V18Y, calculated as reducing sugar released from substrate
3641
lichenan
mutant Q81I, calculated as D-glucose units released from lichenan
3911
lichenan
wild-type, 50°C, pH 5.0
3920
lichenan
truncated enzyme, calculated as D-glucose units released from lichenan
5003
lichenan
pH 5.0, 50°C, mutant W203Y, calculated as reducing sugar released from substrate
5090
lichenan
pH 5.0, 50°C, mutant V18Y/W203Y, calculated as reducing sugar released from substrate
5476
lichenan
mutant W203F, calculated as D-glucose units released from lichenan
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1.01
recombinant enzyme at 37°C
11.6
mutant E11L, 45°C, pH 5.0
15 - 25
mutant N139A, 45°C, pH not specified in the publication
1986
mutant E47I, 45°C, pH not specified in the publication
262
mutant F40I, 45°C, pH not specified in the publication
308
mutant R137Q, 40°C, pH not specified in the publication
3581
mutant K64A, 50°C, pH not specified in the publication
3671
mutant K64M, 50°C, pH not specified in the publication
43 - 46
mutant N44L, 55°C, pH not specified in the publication
5694
wild-type, expressed in Escherichia coli, pH 5.0, 50°C
60 - 61
mutant N44Q, 55°C, pH not specified in the publication
644
mutant Y42L, 45°C, pH not specified in the publication
6520
mutant V18Y, expressed in Escherichia coli, pH 5.0, 50°C
699
mutant R137M, 40°C, pH not specified in the publication
7833
wild-type, 50°C, pH 5.0
803
mutant L62G, 45°C, pH not specified in the publication
9263
mutant W203Y, expressed in Escherichia coli, pH 5.0, 50°C
9967
mutant V18Y/W203Y, expressed in Escherichia coli, pH 5.0, 50°C
1.57
-
pH 6.0, 40°C, mutant D58E
10800
-
expressed in Pichia pastoris X-33, sodium citrate buffer, pH 6.0, 50°C, 10 min
1388
-
pH 6.0, 40°C, wild type
15 - 19
-
pH 6.0, mutant W105H
1572
-
pH 6.0, mutant W165H
1621
-
pH 6.0, mutant W105F
1755
-
pH 6.0, mutant W198F
1791
-
pH 6.0, mutant W165F
2.43
-
pH 6.0, 40°C, mutant D58N
2.57
-
pH 6.0, 40°C, mutant E60D
2941
-
pH 6.0, mutant W186F
419
-
pH 6.0, mutant W141F
480
-
pH 6.0, mutant W148F
5.75
-
pH 6.0, 40°C, mutant E56D
502
-
pH 6.0, 40°C, mutant G63A
545
-
pH 6.0, 40°C, mutant M39F
626
-
substrate lichenan, pH 6.0-7.0, 45°C, mutant TFsW203F
69
-
pH 6.0, mutant W141H
70
-
pH 6.0, mutant W203R
7980
-
expressed in Escherichia coli, sodium citrate buffer, pH 6.0, 50°C, 10 min
8726
-
pH 6.0, mutant W203F
916
-
pH 6.0, mutant W112F
2065
-
pH 6.0, wild type
2065
-
wild type, sodium citrate buffer, pH 6.0, 50°C, 10 min
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233Stop
28.4% of wild-type activity
D202L
shows a 1.2fold decrease in catalytic efficiency (kcat/KM) compared to the wild-type
D202N
exhibits a 1.8fold increase in catalytic efficiency (kcat/KM) compared to the wild-type
D206M
shows a 1.1fold increase in catalytic efficiency (kcat/KM) compared to the wild-type
D206N
exhibits a 1.5fold increase in catalytic efficiency (kcat/KM) compared to the wild-type
D206R
exhibits the highest relative activity at 50°C over 10 min, shows a 1.2fold decrease in catalytic efficiency (kcat/KM) compared to the wild-type
E11L
mutant of truncated beta-glucanase catalytic domain, residues 1-243. No discernible changes in secondary structure, more than 10fold decrease in specific activity, more than 2fold increase in KM-value, significant decrease in catalytic efficiency
E47I
mutant of truncated beta-glucanase catalytic domain, residues 1-243. No discernible changes in secondary structure, more than 2fold increase in KM-value
E85D
has 5fold lower kcat/Km ratios than the wild-type
E85I
has 5fold lower kcat/Km ratios than the wild-type
F205L
shows a 3.8fold decrease in catalytic efficiency (kcat/KM) compared to the wild-type
F40I
mutant of truncated beta-glucanase catalytic domain, residues 1-243. No discernible changes in secondary structure, more than 10fold decrease in specific activity, significant decrease in catalytic efficiency
G201S
shows a 1.5fold decrease in catalytic efficiency (kcat/KM) compared to the wild-type
G207N
shows a fold decrease in catalytic efficiency (kcat/KM) compared to the wild-type
K200F
is the most heat-sensitive enzyme, retains 72% of activity at 45°C for 10 min, shows a 1.2fold decrease in catalytic efficiency (kcat/KM) compared to the wild-type
K200M
shows a 1.1fold decrease in catalytic efficiency (kcat/KM) compared to the wild-type
K64A
mutant of truncated beta-glucanase catalytic domain, residues 1-243. No discernible changes in secondary structure
K64M
mutant of truncated beta-glucanase catalytic domain, residues 1-243. No discernible changes in secondary structure, more than 2fold increase in KM-value
L62G
mutant of truncated beta-glucanase catalytic domain, residues 1-243. No discernible changes in secondary structure
N139A
mutant of truncated beta-glucanase catalytic domain, residues 1-243. No discernible changes in secondary structure, more than 2fold increase in KM-value, significant decrease in catalytic efficiency
N208G
shows a fold decrease in catalytic efficiency (kcat/KM) compared to the wild-type
N44L
mutant of truncated beta-glucanase catalytic domain, residues 1-243. No discernible changes in secondary structure
N44Q
mutant of truncated beta-glucanase catalytic domain, residues 1-243. No discernible changes in secondary structure, more than 2fold increase in KM-value
N72A
has 11fold lower kcat/Km ratios than the wild-type
N72Q
has 17fold lower kcat/Km ratios than the wild-type
Q70A
has 299fold lower kcat/Km ratios than the wild-type
Q70D
has 62fold lower kcat/Km ratios than the wild-type
Q70E
has 106fold lower kcat/Km ratios than the wild-type
Q70I
has 499fold lower kcat/Km ratios than the wild-type
Q70N
has 63fold lower kcat/Km ratios than the wild-type
Q70R
has 35fold lower kcat/Km ratios than the wild-type
Q81I
has 2fold lower kcat/Km ratios than the wild-type
Q81N
has 2.5fold lower kcat/Km ratios than the wild-type
R137M
mutant of truncated beta-glucanase catalytic domain, residues 1-243. No discernible changes in secondary structure, more than 10fold decrease in specific activity, more than 2fold increase in KM-value, significant decrease in catalytic efficiency
R137Q
mutant of truncated beta-glucanase catalytic domain, residues 1-243. No discernible changes in secondary structure, more than 10fold decrease in specific activity, more than 2fold increase in KM-value, significant decrease in catalytic efficiency
R209M
shows a 1.1fold increase, in catalytic efficiency (kcat/KM) compared to the wild-type
T204F
shows a 2.2fold decrease in catalytic efficiency (kcat/KM) compared to the wild-type
W203R
exhibits a 207fold decrease in catalytic efficiency (kcat/KM) compared to the wild-type
Y42L
mutant of truncated beta-glucanase catalytic domain, residues 1-243. No discernible changes in secondary structure, more than 10fold decrease in specific activity
D58A
-
no enzymatic activity
D58E
-
dramatic decrease in kcat, substrate affinity similar to wild type
D58N
-
dramatic decrease in kcat, substrate affinity similar to wild type
E56A
-
no enzymatic activity
E56D
-
dramatic decrease in kcat, substrate affinity similar to wild type
E56Q
-
no enzymatic activity
E60A
-
no enzymatic activity
E60D
-
dramatic decrease in kcat, substrate affinity similar to wild type
E60Q
-
no enzymatic activity
G63A
-
decrease in thermostability
M39F
-
5-fold increase in km value
W105F
-
significant decrease in thermostability
W105H
-
significant decrease in thermostability
W141F
-
5-7-fold increase in KM-value for lichenan compared to wild type, decrease in kcat-value, no significant change in thermal stability
W141H
-
5-7-fold increase in KM-value for lichenan compared to wild type, decrease in kcat-value, no significant change in thermal stability
W148F
-
decrease in kcat-value, no significant change in thermal stability
W165F
-
after incubation at pH 3.0, 1 h, 3-7-fold higher activity than wild type
W165H
-
significant decrease in thermostability
W186F
-
increase in kcat-value, no significant change in thermal stability
W198F
-
significant decrease in thermostability
W203R
-
5-7-fold increase in KM-value for lichenan compared to wild type, decrease in kcat-value, after incubation at pH 3.0, 1 h, 3-7-fold higher activity than wild type, no significant change in thermal stability
W54F
-
decrease in kcat-value, no significant change in thermal stability
W54Y
-
decrease in kcat-value, no significant change in thermal stability
M27D/M39R
0.1% of wild-type activity
M27D/M39R
site-directed mutagenesis, almost inactive mutant
M27R/M39D
0.2% of wild-type activity
M27R/M39D
site-directed mutagenesis, almost inactive mutant
M39F
92.8% of wild-type activity
M39F
site-directed mutagenesis, 7% reduced activity compared to wild-type
S71F
loss of activity
S71F
site-directed mutagenesis, inactive mutant
S84D
80.9% of wild-type activity
S84D
site-directed mutagenesis, 19% reduced activity compared to wild-type
V18Y
104% of wild-type activity. Increase in thermostability by 2 degrees
V18Y
site-directed mutagenesis, 4% reduced activity compared to wild-type
V18Y/W203Y
134.3% of wild-type activity
V18Y/W203Y
site-directed mutagenesis, 34% increased activity compared to wild-type
V61F
20.9% of wild-type activity
V61F
site-directed mutagenesis, 79% reduced activity compared to wild-type
W203F
exhibits a 2.4fold increase in catalytic efficiency (kcat/KM) compared to the wild-type
W203F
87.6% of wild-type activity
W203F
mutant of truncated beta-glucanase catalytic domain, residues 1-243. mutant has increased hydrolytic activity. Residue W203 is stacked with the glucose product of cellotriose. Two extra calcium ions and a Tris molecule bind to the mutant structure. A Tris molecule, bound to the catalytic residues of E56 and E60, is found at the position normally taken by substrate binding at the -1 subsite. A second Ca2+ ion is found near the residues F152 and E154 on the protein's surface, and a third one near the active site residue D202
W203F
site-directed mutagenesis, 13% reduced activity compared to wild-type
W203Y
130.2% of wild-type activity
W203Y
site-directed mutagenesis, 30% increased activity compared to wild-type
W203F
-
increase in kcat-value, no significant change in thermal stability
W203F
-
site-directed mutagenesis, truncated and mutated 1,31,4-beta-D-glucanase, no activity with laminarin
additional information
construction of mutants based on catalytic domain, residues 1-243, with higher thermostability and specific activity
additional information
kinetic and thermostability analysis of the mutant enzymes, overview
additional information
end-to-end fusion, site-directed mutagenesis
additional information
-
truncated form of enzyme containing the catalytic domain from amino acid 1-258, higher thermal stability and enzymatic activity than wild type protein, crystal structure
additional information
-
engineering of dual-functional hybrid glucanases from a truncated and mutated 1,3-1,4-beta-D-glucanase gene TFsW203F from Fibrobacter succinogenes, and a 1,3-beta-D-glucanase gene TmLam from hyperthermophilic Thermotoga maritima used as target enzymes, by ligating substrate-binding domains (TmB1 and TmB2) and the catalytic domain (TmLamCD) of TmLam to the N- or C-terminus of TFsW203F to create four hybrid enzymes, TmB1-TFsW203F, TFsW203F-TmB2, TmB1-TFsW203F-TmB2 and TFsW203F-TmLamCD, creation of desirable hybrid enzymes with economic benefits for industrial applications. Improved thermal tolerance of the hybrid enzyme TFsW203FTmLamCD, fluorescence and circular dichroism spectrometric analyses, overview. Kinetic properties of parental TFsW203F and mutant hybrid glucanases
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Irvin, J.E.; Teather, R.M.
Cloning and expression of a Bacteroides succinogenes mixed-linkage beta-glucanase (1,3-1,4-beta-D-glucan 4-glucanohydrolase) gene in Escherichia coli
Appl. Environ. Microbiol.
54
2672-2676
1988
Fibrobacter succinogenes
brenda
Erfle, J.D.; Teather, R.M.; Wood, P.J.; Irvin, J.E.
Purification and properties of a 1,3-1,4-beta-D-glucanase (lichenase, 1,3-1,4-beta-D-glucan 4-glucanohydrolase, EC 3.2.1.73) from Bacteroides succinogenes cloned in Escherichia coli
Biochem. J.
255
833-841
1988
Fibrobacter succinogenes
brenda
Cheng, H.L.; Tsai, L.C.; Lin, S.S.; Yuan, H.S.; Yang, N.S.; Lee, S.H.; Shyur, L.F.
Mutagenesis of Trp(54) and Trp(203) residues on Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase significantly affects catalytic activities of the enzyme
Biochemistry
41
8759-8766
2002
Fibrobacter succinogenes
brenda
Chen, J.L.; Tsai, L.C.; Wen, T.N.; Tang, J.B.; Yuan, H.S.; Shyur, L.F.
Directed mutagenesis of specific active site residues on Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase significantly affects catalysis and enzyme structural stability
J. Biol. Chem.
276
17895-17901
2001
Fibrobacter succinogenes
brenda
Tsai, L.C.; Shyur, L.F.; Lee, S.H.; Lin, S.S.; Yuan, H.S.
Crystal structure of a natural circularly permuted jellyroll protein: 1,3-1,4-beta-D-glucanase from Fibrobacter succinogenes
J. Mol. Biol.
330
607-620
2003
Fibrobacter succinogenes
brenda
Wen, T.N.; Chen, J.L.; Lee, S.H.; Yang, N.S.; Shyur, L.F.
A truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase with improved enzymatic activity and thermotolerance
Biochemistry
44
9197-9205
2005
Fibrobacter succinogenes
brenda
Liu, J.R.; Yu, B.; Zhao, X.; Cheng, K.J.
Coexpression of rumen microbial beta-glucanase and xylanase genes in Lactobacillus reuteri
Appl. Microbiol. Biotechnol.
77
117-124
2007
Fibrobacter succinogenes (P17989)
brenda
Tsai, L.C.; Huang, H.C.; Hsiao, C.H.; Chiang, Y.N.; Shyur, L.F.; Lin, Y.S.; Lee, S.H.
Mutational and structural studies of the active-site residues in truncated Fibrobacter succinogenes1,3-1,4-beta-D-glucanase
Acta Crystallogr. Sect. D
64
1259-1266
2008
Fibrobacter succinogenes (P17989), Fibrobacter succinogenes
brenda
Lin, Y.S.; Tsai, L.C.; Lee, S.H.; Yuan, H.S.; Shyur, L.F.
Structural and catalytic roles of residues located in beta13 strand and the following beta - turn loop in Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase
Biochim. Biophys. Acta
1790
231-239
2009
Fibrobacter succinogenes (P17989), Fibrobacter succinogenes
brenda
Tsai, L.C.; Chen, Y.N.; Shyur, L.F.
Structural modeling of glucanase-substrate complexes suggests a conserved tyrosine is involved in carbohydrate recognition in plant 1,3-1,4-beta-D-glucanases
J. Comput. Aided Mol. Des.
22
915-923
2008
Fibrobacter succinogenes
brenda
Huang, J.W.; Cheng, Y.S.; Ko, T.P.; Lin, C.Y.; Lai, H.L.; Chen, C.C.; Ma, Y.; Zheng, Y.; Huang, C.H.; Zou, P.; Liu, J.R.; Guo, R.T.
Rational design to improve thermostability and specific activity of the truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase
Appl. Microbiol. Biotechnol.
94
111-121
2012
Fibrobacter succinogenes (P17989)
brenda
Tsai, L.C.; Hsiao, C.H.; Liu, W.Y.; Yin, L.M.; Shyur, L.F.
Structural basis for the inhibition of 1,3-1,4-beta-D-glucanase by noncompetitive calcium ion and competitive Tris inhibitors
Biochem. Biophys. Res. Commun.
407
593-598
2011
Fibrobacter succinogenes (P17989)
brenda
Chen, J.; Tsai, L.; Huang, H.; Shyur, L.
Structural and catalytic roles of amino acid residues located at substrate-binding pocket in Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase
Proteins Struct. Funct. Bioinform.
78
2820-2830
2010
Fibrobacter succinogenes (P17989), Fibrobacter succinogenes
brenda
Liu, W.; Lin, Y.; Jeng, W.; Chen, J.; Wang, A.; Shyur, L.
Engineering of dual-functional hybrid glucanases
Protein Eng. Des. Sel.
25
771-780
2012
Fibrobacter succinogenes
brenda
Goldenkova-Pavlova, I.V.; Tyurin, A.A.; Mustafaev, O.N.
The features that distinguish lichenases from other polysaccharide-hydrolyzing enzymes and the relevance of lichenases for biotechnological applications
Appl. Microbiol. Biotechnol.
102
3951-3965
2018
Bacillus amyloliquefaciens, Bacillus amyloliquefaciens (P07980), Bacillus altitudinis, Paenibacillus barcinonensis (A0A097QQT4), Bacillus pumilus (A0A0F6QU36), Paenibacillus barengoltzii (A0A0K1P4J7), Bacillus velezensis (A0A0M4NIK2), Acetivibrio thermocellus (A3DBX3), Acetivibrio thermocellus (Q84C00), Bacillus subtilis (A8CGP1), Bacillus subtilis (G0YW23), Bacillus subtilis (P04957), Bacillus subtilis (Q45691), Paenibacillus polymyxa (A9Z0X6), Ruminococcus albus (E9SCT3), Bacillus sp. SJ-10 (I1W007), Bacillus tequilensis (K0A689), Fibrobacter succinogenes (P17989), Niallia circulans (P19254), Bacillus licheniformis (P27051), Brevibacillus brevis (P37073), Rhodothermus marinus (P45798), Bacillus sp. N137 (Q45648), Bacillus sp. A3 (Q6YAT3), Paenibacillus macerans (Q846Q0), Bacillus subtilis MA139 (A8CGP1), Bacillus tequilensis CGX5-1 (K0A689), Acetivibrio thermocellus DSM 1237 (A3DBX3), Bacillus subtilis 168 (P04957), Ruminococcus albus 8 (E9SCT3), Acetivibrio thermocellus NBRC 103400 (A3DBX3), Brevibacillus brevis ALK36 (P37073), Bacillus velezensis S2 (A0A0M4NIK2), Bacillus altitudinis YC-9, Bacillus subtilis NCIB 8565 (Q45691), Paenibacillus polymyxa CP7 (A9Z0X6), Niallia circulans ATCC 21367 (P19254), Rhodothermus marinus ITI378 (P45798), Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens ATCC 15841 (P07980), Acetivibrio thermocellus ATCC 27405 (A3DBX3), Fibrobacter succinogenes S85 (P17989), Acetivibrio thermocellus VPI 7372 (A3DBX3), Bacillus pumilus US570 (A0A0F6QU36), Bacillus subtilis SU40 (G0YW23), Paenibacillus barcinonensis BP-23 (A0A097QQT4), Acetivibrio thermocellus F7 (Q84C00), Acetivibrio thermocellus NCIMB 10682 (A3DBX3), Acetivibrio thermocellus NRRL B-4536 (A3DBX3)
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