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Information on EC 3.2.1.24 - alpha-mannosidase and Organism(s) Saccharolobus solfataricus and UniProt Accession Q97UK5

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IUBMB Comments
Also hydrolyses alpha-D-lyxosides and heptopyranosides with the same configuration at C-2, C-3 and C-4 as mannose.
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This record set is specific for:
Saccharolobus solfataricus
UNIPROT: Q97UK5
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Word Map
The taxonomic range for the selected organisms is: Saccharolobus solfataricus
The expected taxonomic range for this enzyme is: Bacteria, Eukaryota, Archaea
Synonyms
alpha-mannosidase, mannanase, alpha-d-mannosidase, lysosomal alpha-mannosidase, alpha-mannosidase ii, alpha1,2-mannosidase, golgi alpha-mannosidase ii, alpha-1,2-mannosidase, alpha-man, man2c1, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
class II alpha-mannosidase
-
GH38 alpha-mannosidase
-
GH38 class II alpha-mannosidase
-
1,2-alpha-D-mannosidase
-
-
-
-
1,2-alpha-mannosidase
-
-
-
-
Alpha mannosidase 6A8B
-
-
-
-
alpha-D-mannopyranosidase
-
-
-
-
alpha-D-mannosidase
-
-
-
-
Alpha-D-mannoside mannohydrolase
-
-
-
-
AMAN
-
-
-
-
exo-alpha-mannosidase
-
-
-
-
Laman
-
-
-
-
Lysosomal acid alpha-mannosidase
-
-
-
-
p-nitrophenyl-alpha-mannosidase
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hydrolysis of O-glycosyl bond
-
-
-
-
PATHWAY SOURCE
PATHWAYS
SYSTEMATIC NAME
IUBMB Comments
alpha-D-mannoside mannohydrolase
Also hydrolyses alpha-D-lyxosides and heptopyranosides with the same configuration at C-2, C-3 and C-4 as mannose.
CAS REGISTRY NUMBER
COMMENTARY hide
9025-42-7
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
4-nitrophenyl alpha-D-mannoside + H2O
4-nitrophenol + alpha-D-mannose
show the reaction diagram
alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->6)]-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc + H2O
alpha-D-mannose + ?
show the reaction diagram
-
-
-
?
alpha-D-Man-(1->2)-D-Man + H2O
2 alpha-D-mannose
show the reaction diagram
-
-
-
?
alpha-D-Man-(1->3)-D-Man + H2O
2 alpha-D-mannose
show the reaction diagram
-
-
-
?
alpha-D-Man-(1->3)-[alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc + H2O
alpha-D-mannose + ?
show the reaction diagram
-
-
-
?
alpha-D-Man-(1->4)-D-Man + H2O
2 alpha-D-mannose
show the reaction diagram
-
-
-
?
alpha-D-Man-(1->6)-D-Man + H2O
2 alpha-D-mannose
show the reaction diagram
-
-
-
?
RNase-B-Man(n)-glycoform + H2O
RNase-B-Man(n-1)-glycoform + alpha-D-mannose
show the reaction diagram
-
-
-
?
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
additional information
?
-
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Mg2+
0.1 mM, activates recombinant enzyme
additional information
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
Cu2+
inhibits in presence of Co2+
Ni2+
inhibits in presence of Co2+
swainsonine
Zn2+
mutant enzymes H228Q, H533E, and H533Q, are all inhibited by high Zn2+ concentrations (1 mM)
additional information
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.11 - 2.9
4-nitrophenyl alpha-D-mannoside
0.85 - 2.3
alpha-D-Man-(1->2)-D-Man
1.16
alpha-D-Man-(1->3)-D-Man
pH 5.0, 70°C, enzyme in complex with Co2+
2 - 2.5
alpha-D-Man-(1->4)-D-Man
2
alpha-D-Man-(1->6)-D-Man
pH 5.0, 70°C, enzyme in complex with Co2+
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.088 - 158
4-nitrophenyl alpha-D-mannoside
3.1 - 5.5
alpha-D-Man-(1->2)-D-Man
4.9
alpha-D-Man-(1->3)-D-Man
pH 5.0, 70°C, enzyme in complex with Co2+
1.9 - 10.4
alpha-D-Man-(1->4)-D-Man
2
alpha-D-Man-(1->6)-D-Man
pH 5.0, 70°C, enzyme in complex with Co2+
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.014 - 351
4-nitrophenyl alpha-D-mannoside
0.206 - 6.4
alpha-D-Man-(1->2)-D-Man
0.102 - 4.2
alpha-D-Man-(1->3)-D-Man
0.106 - 4.2
alpha-D-Man-(1->4)-D-Man
1
alpha-D-Man-(1->6)-D-Man
pH 5.0, 70°C, enzyme in complex with Co2+
IC50 VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.2
swainsonine
Saccharolobus solfataricus
pH 6.5, 65°C
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
14.4
substrate: 4-nitrophenyl alpha-D-mannoside, pH 6.5, 65°C
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4.2 - 6
pH 4.2: about 35% of maximal activity, pH 6.0: about 40% of maximal activity, wild-type enzyme
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
physiological function
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
110000
3 * 110000, SDS-PAGE
363000
gel filtration
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
trimer
3 * 110000, SDS-PAGE
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
D338G
inactive mutant enzyme. In presence of the external nucleophil (1 M) sodium formate the activity is partially rescued
D534A
mutant enzyme shows no detectable activity (kcat below 0.01 s-1) within the pH range of 3-7 and with Co2+ as the activating divalent metal ion
D534Q
mutant enzyme shows no detectable activity (kcat below 0.01 s-1) within the pH range of 3-7 and with Co2+ as the activating divalent metal ion
H228E/H533E
mutant enzyme shows no detectable activity (kcat below 0.01 s-1) within the pH range of 3-7 and with Co2+ as the activating divalent metal ion
H228Q
the mutant enzyme is inhibited at increasing Zn2+ concentrations. The catalytic rate is reduced for all enzymes compared to that of the wild-type enzyme, although less dramatically with some activating metal ions. The mutant enzyme has a structural integrity in terms of thermostability similar to that of the wild-type enzyme
H228Q/H533Q
mutant enzyme shows no detectable activity (kcat below 0.01 s-1) within the pH range of 3-7 and with Co2+ as the activating divalent metal ion
H533E
the mutant enzyme is inhibited at increasing Zn2+ concentrations. The catalytic rate is reduced for all enzymes compared to that of the wild-type enzyme, although less dramatically with some activating metal ions The mutant enzyme has a structural integrity in terms of thermostability similar to that of the wild-type enzyme
H533Q
the mutant enzyme is inhibited at increasing Zn2+ concentrations. The catalytic rate is reduced for all enzymes compared to that of the wild-type enzyme, although less dramatically with some activating metal ions The mutant enzyme has a structural integrity in terms of thermostability similar to that of the wild-type enzyme
pH STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4.5
instability below pH 4.5
729186
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
80
half-life: 1.5 min
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed as a fusion of the glutathione S-transferase of Schistosoma japonicum in Escherichia coli
overexpression in Sulfolobus solfataricus mutant PBL2025, that misses 50 genes (SSO3004-3050), including genes coding for a multitude of enzymes possibly involved in sugar degradation or metabolism
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Cobucci-Ponzano, B.; Conte, F.; Strazzulli, A.; Capasso, C.; Fiume, I.; Pocsfalvi, G.; Rossi, M.; Moracci, M.
The molecular characterization of a novel GH38 alpha-mannosidase from the crenarchaeon Sulfolobus solfataricus revealed its ability in de-mannosylating glycoproteins
Biochimie
92
1895-1907
2010
Saccharolobus solfataricus (Q97UK5), Saccharolobus solfataricus, Saccharolobus solfataricus P2 (Q97UK5)
Manually annotated by BRENDA team
Nielsen, J.W.; Poulsen, N.R.; Johnsson, A.; Winther, J.R.; Stipp, S.L.; Willemoes, M.
Metal-ion dependent catalytic properties of Sulfolobus solfataricus class ii alpha-mannosidase
Biochemistry
51
8039-8046
2012
Saccharolobus solfataricus (Q97UK5), Saccharolobus solfataricus P2 (Q97UK5)
Manually annotated by BRENDA team
Koerdt, A.; Jachlewski, S.; Ghosh, A.; Wingender, J.; Siebers, B.; Albers, S.V.
Complementation of Sulfolobus solfataricus PBL2025 with an alpha-mannosidase: effects on surface attachment and biofilm formation
Extremophiles
16
115-125
2012
Saccharolobus solfataricus (Q97UK5), Saccharolobus solfataricus P2 (Q97UK5)
Manually annotated by BRENDA team
Hansen, D.K.; Webb, H.; Nielsen, J.W.; Harris, P.; Winther, J.R.; Willemoes, M.
Mutational analysis of divalent metal ion binding in the active site of class II alpha-mannosidase from Sulfolobus solfataricus
Biochemistry
24
2032-2039
2015
Saccharolobus solfataricus (Q97UK5), Saccharolobus solfataricus P2 (Q97UK5)
Manually annotated by BRENDA team