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Information on EC 3.2.1.21 - beta-glucosidase and Organism(s) Zea mays and UniProt Accession P49235

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EC Tree
IUBMB Comments
Wide specificity for beta-D-glucosides. Some examples also hydrolyse one or more of the following: beta-D-galactosides, alpha-L-arabinosides, beta-D-xylosides, beta-D-fucosides.
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This record set is specific for:
Zea mays
UNIPROT: P49235
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Word Map
The taxonomic range for the selected organisms is: Zea mays
The enzyme appears in selected viruses and cellular organisms
Synonyms
beta-glucosidase, linamarase, beta-glu, emulsin, bglu1, zm-p60.1, bgl1b, cel3a, novozyme 188, t-cell inhibitor, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
ZM-p60.1
-
amygdalase
-
-
-
-
amygdalinase
-
-
-
-
arbutinase
-
-
-
-
aryl-beta-glucosidase
-
-
-
-
beta-1,6-glucosidase
-
-
-
-
beta-D-glucosidase
-
-
-
-
beta-D-glucoside glucohydrolase
-
-
-
-
beta-glucoside hydrolase
-
-
-
-
BGA
-
-
-
-
cellobiase
-
-
-
-
elaterase
-
-
-
-
emulsin
-
-
-
-
gentiobiase
-
-
-
-
limarase
-
-
-
-
Novozyme 188
-
-
-
-
p-nitrophenyl beta-glucosidase
-
-
-
-
primeverosidase
-
-
-
-
salicilinase
-
-
-
-
salicinase
-
-
T-cell inhibitor
-
-
-
-
vicianase
-
-
-
-
ZmGlu1
-
-
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose
show the reaction diagram
substrate binding mode and structure
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hydrolysis of O-glycosyl bond
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
beta-D-glucoside glucohydrolase
Wide specificity for beta-D-glucosides. Some examples also hydrolyse one or more of the following: beta-D-galactosides, alpha-L-arabinosides, beta-D-xylosides, beta-D-fucosides.
CAS REGISTRY NUMBER
COMMENTARY hide
9001-22-3
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
2-nitrophenyl beta-D-glucopyranoside + H2O
2-nitrophenol + beta-D-glucose
show the reaction diagram
-
-
-
?
2-O-beta-D-glucopyranosyl-4-hydroxy-7-methoxy-1,4-benzoxazin-3-one + H2O
2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one + beta-D-glucose
show the reaction diagram
4-methylumbelliferyl beta-D-glucopyranoside + H2O
4-methylumbelliferone + beta-D-glucose
show the reaction diagram
-
-
-
?
4-methylumbelliferyl-beta-D-glucoside + H2O
4-methylumbelliferone + beta-D-glucose
show the reaction diagram
-
-
-
?
4-nitrophenyl beta-D-glucopyranoside + H2O
4-nitrophenol + beta-D-glucose
show the reaction diagram
-
-
-
?
4-nitrophenyl beta-D-glucopyranoside + H2O
4-nitrophenol + D-glucopyranose
show the reaction diagram
-
-
-
?
dhurrin + H2O
(2S)-hydroxy(4-hydroxyphenyl)ethanenitrile + beta-D-glucose
show the reaction diagram
-
-
-
?
2-nitrophenyl beta-D-glucopyranoside + H2O
2-nitrophenol + beta-D-glucose
show the reaction diagram
-
-
-
-
?
4-nitrophenyl alpha-L-arabinofuranoside + H2O
4-nitrophenol + alpha-L-arabinofuranose
show the reaction diagram
-
low activity
-
?
4-nitrophenyl beta-D-galactoside + H2O
4-nitrophenol + beta-D-galactose
show the reaction diagram
-
low activity
-
?
4-nitrophenyl beta-D-glucopyranoside + H2O
4-nitrophenol + beta-D-glucose
show the reaction diagram
-
-
-
-
?
4-nitrophenyl beta-D-glucopyranoside + H2O
4-nitrophenol + D-glucopyranose
show the reaction diagram
-
relatively specific for aryl-beta-D-linked glucopyranoside substrates
-
?
cellobiose + H2O
2 beta-D-glucose
show the reaction diagram
-
-
-
-
?
dhurrin + H2O
(2S)-hydroxy(4-hydroxyphenyl)ethanenitrile + beta-D-glucose
show the reaction diagram
-
-
-
-
?
salicin + H2O
beta-D-glucose + 2-(hydroxymethyl)phenol
show the reaction diagram
-
-
-
-
?
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
2-O-beta-D-glucopyranosyl-4-hydroxy-7-methoxy-1,4-benzoxazin-3-one + H2O
2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one + beta-D-glucose
show the reaction diagram
-
-
-
?
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
2-mercaptoethanol
-
activates
Ca2+
-
activates
K+
-
activates
Mg2+
-
activates
additional information
-
no effects by EDTA and NaCl
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
cyclic glucotetrazole
mimics the 4H3 transition state intermediate
Dhurrin
competitive inhibitor
1-naphthylacetic acid
-
competitive inhibition, Ki: 0.43 mM
Ag+
-
-
beta-D-glucose
-
competitive inhibition, Ki: 148 mM
cellobiose
-
competitive versus substrate salicin
Cu2+
-
-
D-glucono-1,5-lactone
-
competitive inhibition, Ki: 0.84 mM
D-glucose
-
competitive versus substrate 4-nitrophenyl-beta-D-glucopyranoside
Hg2+
-
-
indole-3-acetic acid
-
competitive inhibition, Ki: 1.14 mM
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
1.21 - 3.76
2-nitrophenyl beta-D-glucopyranoside
0.16 - 0.76
4-methylumbelliferyl beta-D-glucopyranoside
0.12 - 1.73
4-methylumbelliferyl-beta-D-glucoside
0.41 - 1.15
4-nitrophenyl beta-D-glucopyranoside
0.045 - 3.5
4-nitrophenyl-beta-D-glucoside
0.031 - 0.101
Dhurrin
1.02 - 1.4
2-nitrophenyl beta-D-glucopyranoside
0.35 - 0.42
4-nitrophenyl beta-D-glucopyranoside
0.65 - 2.3
4-nitrophenyl-beta-D-glucopyranoside
4.6
cellobiose
-
pH 4.5, 37°C
0.04 - 0.51
Dhurrin
9.3
Salicin
-
pH 4.5, 37°C
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
6.6 - 353.2
2-nitrophenyl beta-D-glucopyranoside
1.7 - 97.9
4-methylumbelliferyl beta-D-glucopyranoside
0.22 - 70.88
4-methylumbelliferyl-beta-D-glucoside
0.67 - 163.8
4-nitrophenyl beta-D-glucopyranoside
0.22 - 49.27
4-nitrophenyl-beta-D-glucoside
0.16 - 2.23
Dhurrin
19.83 - 64.25
2-nitrophenyl beta-D-glucopyranoside
24.16 - 107.9
4-nitrophenyl beta-D-glucopyranoside
13.46 - 53.96
Dhurrin
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
15.25 - 47.24
2-nitrophenyl beta-D-glucopyranoside
63.57 - 276.7
4-nitrophenyl beta-D-glucopyranoside
26.1 - 1349
Dhurrin
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
13.5
-
purified enzyme
5.4
-
-
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5.8
assay at
4.8
-
-
5.8
-
assay at
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
3.6 - 6
-
-
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
37
assay at
25
-
assay at 25°C, substrates: 2-nitrophenyl beta-D-glucopyranoside and 4-nitrophenyl beta-D-glucopyranoside
TEMPERATURE RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
20 - 60
-
-
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
UniProt
Manually annotated by BRENDA team
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
HGGL1_MAIZE
566
0
64237
Swiss-Prot
Chloroplast (Reliability: 1)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
60000
-
SDS-PAGE
62400
-
native PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
homodimer
crystal structure
monomer
-
1 * 62400, SDS-PAGE
additional information
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
crystal structure of mutant E191D,F198V is determined at 1.9 A resolution in complex with DIMBOA-glucoside
purified recombinant Glu1 mutant E191D in complex with cyclic inhibitor glucoetrazole, the crystallization solution is miced with 0.005 ml glycerol and 0.003 ml of inhibitor solution, X-ray diffraction structure determination and analysis at 1.95 A resolution
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
D261N
the D261N substitution leads to a drastic decrease in relative efficiency of ZmGlu1 on all substrates tested, but little effect on the Km
E191D
substrate binding structure analysis from crystal structure
E191D/F198V
inactive mutant, F198 substitution causes a rearrangement of residues F205, F466, and E464 involved in aglycone binding
F193A
increase in affinity for a small polar aglycone, deep decrease in kcat value. 7.8% of wild-type activity for substrate 4-nitrophenyl-beta-D-glucoside, 3% for substrate 4-methylumbelliferyl-beta-D-glucoside, respectively
F193A/F200K/W373K/F461L
almost complete loss of catalytic activity, extensive alterations in strucutre
F198V
mutant shows drastic effect on catalytic efficacy, kcat is reduced by 90% for hydrolysis of 4-methylumbelliferyl beta-D-glucopyranoside compared to wild-type. Mutant is unable to hydrolyze 4-nitrophenyl beta-D-glucopyranoside. Only negligible activity toward substrate 2-nitrophenyl beta-D-glucopyranoside compared to wild-type
F198V/F205L/P377A
mutant shows a drastic reduced relative efficacy for all test substrated due to a decreased turnover
F200K
1.1% of wild-type activity for substrate 4-nitrophenyl-beta-D-glucoside, 0.3% for substrate 4-methylumbelliferyl-beta-D-glucoside, respectively
F205L
Mutant shows similar relative efficacy compared to wild-type toward all substrates tested. Mutant shows no significant effect on hydrolysis of 4-nitrophenyl beta-D-glucopyranoside other than doubling the kcat value compared to wild-type
F461L
120% of wild-type activity for substrate 4-nitrophenyl-beta-D-glucoside, 119% for substrate 4-methylumbelliferyl-beta-D-glucoside, respectively
F466S
mutant exhibits a marked increase in relative efficiency in comparison to wild-type ZmGlu1 on all substrates tested (from 28 to 123%), because of increased substrate turnover. Mutant has little effect on dhurrin hydrolysis compared to wild-type (3% of relative efficacy compared to Sorghum Dhr1)
F466S/A467S
the A467S substitution in ZmGlu1 has no detectable effect on substrate specificity and catalytic efficiency in the case of 4-nitrophenyl beta-D-glucopyranoside or 2-nitrophenyl beta-D-glucopyranoside hydrolysis, and only a lower Km is obtained for 4-methylumbelliferyl beta-D-glucuronide compared to mutant F466S. Mutant has little effect on dhurrin hydrolysis compared to wild-type (3% of relative efficacy compared to Sorghum Dhr1)
K81E
mutant not able to bind chimeric lectin beta-glucosidase aggregating factor
M263F
mutant shows reduced relative efficacy by 40 to 50% on 4-nitrophenyl beta-D-glucopyranoside and 4-methylumbelliferyl beta-D-glucopyranoside whereas it shows an increase of about 60% relative efficacy on 2-nitrophenyl beta-D-glucopyranoside compared to wild-type
N481E
mutant with lowered affinity to cimeric lectin beta-glucosidase aggregating factor
P377A
P377A mutation leads to changes (decreases) in both kcat and Km for all substrated with no decrease in the overall relative efficiency
T82Y
mutant not able to bind chimeric lectin beta-glucosidase aggregating factor
W373K
large decrease in kcat value. 0.5% of wild-type activity for substrate 4-nitrophenyl-beta-D-glucoside, 0.04% for substrate 4-methylumbelliferyl-beta-D-glucoside, respectively
Y473F
kcat is increased by 110% to 450% depending on the substrate tested. Enhanced turnover is compensated by a slight increase in Km of this mutant giving a 40% to 250% (depending on the substrate tested) better relative efficacy over the wild-type enzyme. Mutation leads to a significant effect towards dhurrin hydrolysis (10% relative efficacy as compared to Sorghum Dhr1)
additional information
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
30 - 40
-
stable within this range, rapid decrease in activity below 30°C and above 40°C
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
using Ni-NTA chromatography
native enzyme 45fold to homogeneity by ammonium sulfate fractionation, ion exchange chromatography, and gel filtration
-
partial
-
using Ni-NTA chromatography
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Escherichia coli as a His-tagged fusion protein
expressed in Escherichia coli as a His-tagged fusion protein
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
industry
-
application in simultaneous saccharification and fermentation, evaluation of the suitability of plant glycosyl hydrolases in lignocellulose conversion
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Feldwisch, J.; Vente, A.; Zettl, R.; Bako, L.; Campos, N.; Palme, K.
Characterization of two membrane-associated beta-glucosidases from maize (Zea mays L.) coleoptiles
Biochem. J.
302
15-21
1994
Zea mays
Manually annotated by BRENDA team
Verdoucq, L.; Moriniere, J.; Bevan, D.R.; Esen, A.; Vasella, A.; Henrissat, B.; Czjze, M.
Structural determinants of substrate specificity in family 1 beta-glucosidases: novel insights from the crystal structure of sorghum dhurrinase-1, a plant beta-glucosidase with strict specificity, in complex with its natural substrate
J. Biol. Chem.
279
31796-31803
2004
Sorghum bicolor, Zea mays (P49235), Zea mays
Manually annotated by BRENDA team
Han, Y.; Chen, H.
Characterization of beta-glucosidase from corn stover and its application in simultaneous saccharification and fermentation
Biores. Technol.
99
6081-6087
2008
Zea mays
Manually annotated by BRENDA team
Yu, H.Y.; Kittur, F.S.; Bevan, D.R.; Esen, A.
Lysine-81 and threonine-82 on maize beta-glucosidase isozyme Glu1 are the key amino acids involved in beta-glucosidase aggregating factor binding (dagger)
Biochemistry
48
2924-2932
2009
Zea mays (P49235), Zea mays
Manually annotated by BRENDA team
Dopitova, R.; Mazura, P.; Janda, L.; Chaloupkova, R.; Jerabek, P.; Damborsky, J.; Filipi, T.; Kiran, N.S.; Brzobohaty, B.
Functional analysis of the aglycone-binding site of the maize beta-glucosidase Zm-p60.1
FEBS J.
275
6123-6135
2008
Zea mays (P49235), Zea mays
Manually annotated by BRENDA team
Cicek, M.; Blanchard, D.; Bevan, D.R.; Esen, A.
The aglycone specificity-determining sites are different in 2, 4-dihydroxy-7-methoxy-1,4-benzoxazin-3-one (DIMBOA)-glucosidase (Maize beta -glucosidase) and dhurrinase (Sorghum beta -glucosidase)
J. Biol. Chem.
275
20002-20011
2000
Sorghum bicolor, Zea mays
Manually annotated by BRENDA team
Verdoucq, L.; Czjzek, M.; Moriniere, J.; Bevan, D.R.; Esen, A.
Mutational and structural analysis of aglycone specificity in maize and sorghum beta-glucosidases
J. Biol. Chem.
278
25055-25062
2003
Sorghum bicolor, Zea mays (P49235), Zea mays
Manually annotated by BRENDA team