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Information on EC 3.2.1.132 - chitosanase and Organism(s) Streptomyces sp. and UniProt Accession P33665

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IUBMB Comments
A whole spectrum of chitosanases are now known (for more details, see {http://rbrzezinski.recherche.usherbrooke.ca/::http://rbrzezinski.recherche.usherbrooke.ca/}). They can hydrolyse various types of links in chitosan. The only constant property is the endohydrolysis of GlcN-GlcN links, which is common to all known chitosanases. One known chitosanase is limited to this link recognition , while the majority can also recognize GlcN-GlcNAc links or GlcNAc-GlcN links but not both. They also do not recognize GlcNAc-GlcNAc links in partly acetylated chitosan.
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This record set is specific for:
Streptomyces sp.
UNIPROT: P33665
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Word Map
The taxonomic range for the selected organisms is: Streptomyces sp.
The expected taxonomic range for this enzyme is: Eukaryota, Bacteria, Archaea
Synonyms
chitosanase, csnts, endo-chitosanase, chitosanase ii, gscsn46a, family 46 chitosanase, chit b, csnw2, endochitosanase, chit a, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
chitosanase
-
-
endo-chitosanase
-
-
N174 chitosanase
-
-
StrCSN2
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hydrolysis of O-glycosyl bond
-
-
-
-
PATHWAY SOURCE
PATHWAYS
SYSTEMATIC NAME
IUBMB Comments
chitosan N-acetylglucosaminohydrolase
A whole spectrum of chitosanases are now known (for more details, see {http://rbrzezinski.recherche.usherbrooke.ca/::http://rbrzezinski.recherche.usherbrooke.ca/}). They can hydrolyse various types of links in chitosan. The only constant property is the endohydrolysis of GlcN-GlcN links, which is common to all known chitosanases. One known chitosanase is limited to this link recognition [4], while the majority can also recognize GlcN-GlcNAc links or GlcNAc-GlcN links but not both. They also do not recognize GlcNAc-GlcNAc links in partly acetylated chitosan.
CAS REGISTRY NUMBER
COMMENTARY hide
51570-20-8
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
30% N-acetylated chitosan + H2O
?
show the reaction diagram
-
-
-
?
4-methylumbelliferyl beta-chitotrioside + H2O
4-methylumbelliferone + chitotriose + chitobiose + 4-methylumbelliferyl N-acetyl-beta-D-glucosaminide
show the reaction diagram
-
-
-
-
?
acetylated chitosan + H2O
?
show the reaction diagram
-
-
-
-
?
chitohexaose + H2O
?
show the reaction diagram
-
-
-
-
?
chitohexaose + H2O
chitobiose + chitotriose + chitotetraose
show the reaction diagram
-
-
mutant enzyme D57A produces smaller amounts of chitobiose and chitotetraose as compared to chitotriose than does the wild-type enzyme
-
?
chitopentaose + H2O
?
show the reaction diagram
-
-
-
-
?
chitosan + H2O
?
show the reaction diagram
chitosan + H2O
chitosan oligosaccharides
show the reaction diagram
chitosan + H2O
N-acetyl-D-glucosamine + ?
show the reaction diagram
chitosan pentasaccharide + H2O
?
show the reaction diagram
chitotetraose + H2O
2 chitobiose
show the reaction diagram
-
-
-
-
?
chitotetraose + H2O
?
show the reaction diagram
-
-
-
-
?
chitohexaose + H2O
additional information
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
chitosan + H2O
?
show the reaction diagram
chitosan + H2O
N-acetyl-D-glucosamine + ?
show the reaction diagram
-
-
-
-
?
chitosan pentasaccharide + H2O
?
show the reaction diagram
-
-
-
-
?
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
-
Mn2+ is neither activating nor inhibitory
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
Cd2+
-
complete deactivation
chitosan
Hg2+
-
complete deactivation
Pb2+
-
complete deactivation
Zn2+
-
about 43% loss of activity
additional information
-
Mn2+ is neither activating nor inhibitory
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.21
4-methylumbelliferyl beta-chitotrioside
-
40°C, pH 5.5
2.9
chitohexaose
-
40°C, pH 5.5
additional information
additional information
-
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
38.4 - 71.4
30% N-acetylated chitosan
-
0.000081
4-methylumbelliferyl beta-chitotrioside
-
40°C, pH 5.5
107
chitohexaose
-
40°C, pH 5.5
0.9 - 11.2
chitosan
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
0.0012
mutant enzyme D40G/R42E, at 37°C in 50 mM sodium acetate buffer (pH 5.5)
0.018
mutant enzyme D40G/R42K, at 37°C in 50 mM sodium acetate buffer (pH 5.5)
0.9
mutant enzyme R42E at 37°C in 50 mM sodium acetate buffer (pH 5.5)
1.4
mutant enzyme R42K, at 37°C in 50 mM sodium acetate buffer (pH 5.5)
1.6
mutant enzyme D40G, at 37°C in 50 mM sodium acetate buffer (pH 5.5)
52.9
wild type enzyme, at 37°C in 50 mM sodium acetate buffer (pH 5.5)
58.9
-
Bio-Gel A eluate of the recombinant protein
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4.5 - 6
4.5 - 6.5
-
-
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
6
-
loss of 50% of activity
7
-
above, complete loss of activity due to partial denaturation of enzyme and chitosan substrate insolubilization
additional information
-
study on the interaction of pH value with activity. Reaction rate decreases by 50% from pH 5.5 to 6.0
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pI VALUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
26000
29000
-
gel filtration
29500
-
x * 29500, SDS-Page
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
monomer
-
1 * 26000, gel filtration
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
-
no glucosamine or other carbohydrate
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
hanging drop crystallization with 30 mg/ml protein in 20 mM acetate, pH 5.5 mixed with 0.1 volume of a 0.5 M potassium phosphate, 20% w/v PEG 8000 solution, monoclinic space group P21
-
sitting drop vapor diffusion method, using 10% (w/v) MEPEG 5K, 300 mM tetramethylammonium chloride, and 100 mM Bis-Tris, pH 6.5, at 4°C
the substrate binding cleft is composed of six monosaccharide binding subsites
-
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
D201A
-
mutant enzyme shows 38.5% of wild-type activity
D37E
-
relative activity to wild-type enzyme is 20-90%
D37N
-
relative activity to wild-type enzyme is 20-90%
D40G/R42E
the mutant shows drastic loss of activity
D40G/R42K
the mutant shows drastic loss of activity
D40N
-
relative activity to wild-type enzyme is 0.02-0.8%
D6N
-
relative activity to wild-type enzyme is 20-90%
E197A
-
mutant enzyme shows 20% of wild-type activity
E22A
-
relative activity to wild-type enzyme is 0.02-0.8%
E22D
-
relative activity to wild-type enzyme is 0.02-0.8%
E22Q
-
relative activity to wild-type enzyme is 0.02-0.8%
E36Q
-
relative activity to wild-type enzyme is 20-90%
R205A
-
relative activity to wild-type enzyme is 0.1-0.2%
R205H
-
relative activity to wild-type enzyme is 0.1-0.2%
R205Y
-
relative activity to wild-type enzyme is 0.1-0.2%
R42E
the mutant shows drastic loss of activity
R42K
the mutant shows drastic loss of activity
W101F
W227F
W28F/W101F
decreased midpoint temperature by about 11°C
additional information
-
consensus enzyme mutant designed by multiple amino acid substitutions. Increase in transition temperature
pH STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
2
-
loss of 90% of activity after 1 h incubation
680991
3 - 8
-
stable for at least 7 h
680991
9
-
and above, loss of 50% of activity after 1 h incubation
680991
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
37
-
stable
40
-
rapid decrease of activity above
54
-
wild-type, transition temperature in absence of chitosan
61
-
both wild-type and mutants A104L, K164R are active over 90 min
69.5
-
wild-type, transition temperature in presence of chitosan at 6 g/l
81.1
-
consensus mutant, transition temperature in presence of chitosan at 6 g/l
83.3
-
mutant A104L, transition temperature in presence of chitosan at 6 g/l
85.1
-
mutant K164R, transition temperature in presence of chitosan at 6 g/l
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
HisTrap column chromatography, and gel filtration
recombinant enzyme from Streptomyces lividans strain TK24 by ion exchange and hydroxylapatite chromatography
-
recombinant protein
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Escherichia coli BL21(DE3) cells
expressed in Streptomyces lividans strain TK24 and Escherichia coli Gold cells
expression in Streptomyces lividans strain TK24
-
expression in Streptomyces lividans TK24
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
analysis
-
fluorimetric determination of transition temperature is a reliable method for rapid assessment of the thermal behaviour of chitosanases and applicable to structure-function studies
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Price, J.S.; Storck, R.
Production, purification, and characterization of an extracellular chitosanase from Streptomyces
J. Bacteriol.
124
1574-1585
1975
Streptomyces sp., Streptomyces sp. No. 6
Manually annotated by BRENDA team
Boucher, I.; Dupuy, A.; Vidal, P.; Neugebauer, W.A.; Brzezinski, R.
Purification and characterization of a chitosanase from Streptomyces N174
Appl. Microbiol. Biotechnol.
38
188-193
1992
Streptomyces sp.
-
Manually annotated by BRENDA team
Marcotte, E.; Hart, P.J.; Boucher, I.; Brzezinski, R.; Robertus, J.D.
Crystallization of a chitosanase from Streptomyces N174
J. Mol. Biol.
232
995-996
1993
Streptomyces sp.
Manually annotated by BRENDA team
Tremblay, H.; Yamaguchi, T.; Fukamizo, T.; Brzezinski, R.
Mechanism of chitosanase-oligosaccharide interaction: subsite structure of Streptomyces sp. N174 chitosanase and the role of Asp57 carboxylate
J. Biochem.
130
679-686
2001
Streptomyces sp.
Manually annotated by BRENDA team
Fukamizo, T.; Brzezinski, R.
Chitosanase from Streptomyces sp. strain N174: a comparative review of its structure and function
Biochem. Cell Biol.
75
687-696
1997
Streptomyces sp.
Manually annotated by BRENDA team
Fukamizo, T.; Honda, Y.; Goto, S.; Boucher, I.; Brzezinski, R.
Reaction mechanism of chitosanase from Streptomyces sp. N174
Biochem. J.
311
377-383
1995
Streptomyces sp.
Manually annotated by BRENDA team
Honda, Y.; Fukamizo, T.; Okajima, T.; Goto, S.; Boucher, I.; Brzezinski, R.
Thermal unfolding of chitosanase from Streptomyces sp. N174: role of tryptophan residues in the protein structure stabilization
Biochim. Biophys. Acta
1429
365-376
1999
Streptomyces sp. (P33665)
Manually annotated by BRENDA team
Honda, Y.; Kirihata, M.; Fukamizo, T.; Kaneko, S.; Tokuyasu, K.; Brzezinski, R.
Chitosanase-catalyzed hydrolysis of 4-methylumbelliferyl beta-chitotrioside
J. Biochem.
126
470-474
1999
Streptomyces sp.
Manually annotated by BRENDA team
Marcotte, E.M.; Monzingo, A.F.; Ernst, S.R.; Brzezinski, R.; Robertus, J.D.
X-ray structure of an anti-fungal chitosanase from streptomyces N174
Nat. Struct. Biol.
3
155-162
1996
Streptomyces sp.
Manually annotated by BRENDA team
Fukamizo, T.; Yamaguchi, T.; Tremblay, H.; Brzezinski, R.
Substrate binding mechanism of chitosanase from Streptomyces sp. N174
Adv. Chitin Sci.
4
575-581
2000
Streptomyces sp.
-
Manually annotated by BRENDA team
Somashekar, D.; Joseph, R.
Chitosanases-properties and applications: a review
Biores. Technol.
55
35-45
1996
Amycolatopsis orientalis, Amycolatopsis sp., Amylomyces rouxii, Bacillus licheniformis, Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) K-1, Bacillus sp. (in: Bacteria) No. 7-M, Bacillus sp. (in: Bacteria) PI-7S, Bacillus sp. (in: Bacteria) R-4, Enterobacter sp., Fusarium solani, Myxobacter sp. AL-1, Niallia circulans, Niallia circulans MH-K1, Priestia megaterium, Pseudomonas sp., Pseudomonas sp. H-14, Rhodotorula toruloides, Streptomyces griseus, Streptomyces sp., Streptomyces sp. No. 6, Talaromyces islandicus
-
Manually annotated by BRENDA team
Katsumi, T.; Lacombe-Harvey, M.E.; Tremblay, H.; Brzezinski, R.; Fukamizo, T.
Role of acidic amino acid residues in chitooligosaccharide-binding to Streptomyces sp. N174 chitosanase
Biochem. Biophys. Res. Commun.
338
1839-1844
2005
Streptomyces sp.
Manually annotated by BRENDA team
Fukamizo, T.; Yoshikawa, T.; Katsumi, T.; Amano, S.; Saito, J.; Miki, K.; Ando, A.; Brzezinski, R.
Substrate-binding mode of bacterial chitosanases
J. Appl. Glycosci.
52
183-189
2005
Niallia circulans, Streptomyces sp., Niallia circulans MH-K1
-
Manually annotated by BRENDA team
Roy, S.; Fortin, M.; Gagnon, J.; Ghinet, M.G.; LeHoux, J.; Dupuis, G.; Brzezinski, R.
Quantitative fluorometric analysis of the protective effect of chitosan on thermal unfolding of catalytically active native and genetically-engineered chitosanases
Biochim. Biophys. Acta
1774
975-984
2007
Streptomyces sp., Streptomyces coelicolor
Manually annotated by BRENDA team
Trimukhe, K.D.; Bachate, S.; Gokhale, D.V.; Varma, A.J.
Metal complexes of crosslinked chitosans Part II. An investigation of their hydrolysis to chitooligosaccharides using chitosanase
Int. J. Biol. Macromol.
41
491-496
2007
Streptomyces sp.
Manually annotated by BRENDA team
Lin Teng Shee, F.; Arul, J.; Brunet, S.; Bazinet, L.
Effect of bipolar membrane electrobasification on chitosanase activity during chitosan hydrolysis
J. Biotechnol.
134
305-311
2008
Streptomyces sp., Streptomyces sp. 174
Manually annotated by BRENDA team
Zitouni, M.; Fortin, M.; Thibeault, J.; Brzezinski, R.
A dye-labelled soluble substrate for the assay of endo-chitosanase activity
Carbohydr. Polym.
80
522-525
2010
Streptomyces sp.
-
Manually annotated by BRENDA team
Lacombe-Harvey, M.E.; Fortin, M.; Ohnuma, T.; Fukamizo, T.; Letzel, T.; Brzezinski, R.
A highly conserved arginine residue of the chitosanase from Streptomyces sp. N174 is involved both in catalysis and substrate binding
BMC Biochem.
14
23
2013
Streptomyces sp. (P33665)
Manually annotated by BRENDA team
Takasuka, T.E.; Bianchetti, C.M.; Tobimatsu, Y.; Bergeman, L.F.; Ralph, J.; Fox, B.G.
Structure-guided analysis of catalytic specificity of the abundantly secreted chitosanase SACTE_5457 from Streptomyces sp. SirexAA-E
Proteins
82
1245-1257
2014
Streptomyces sp. (G2NRC4), Streptomyces sp. SirexAA-E (G2NRC4)
Manually annotated by BRENDA team
Tegl, G.; Oehlknecht, C.; Vielnascher, R.; Rollett, A.; Hofinger-Horvath, A.; Kosma, P.; Guebitz, G.
Cellobiohydrolases produce different oligosaccharides from chitosan
Biomacromolecules
17
2284-2292
2016
Streptomyces sp., Streptomyces griseus (A0A380NDK1)
Manually annotated by BRENDA team