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Information on EC 3.1.4.53 - 3',5'-cyclic-AMP phosphodiesterase and Organism(s) Mus musculus and UniProt Accession Q01063

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EC Tree
     3 Hydrolases
         3.1 Acting on ester bonds
             3.1.4 Phosphoric-diester hydrolases
                3.1.4.53 3',5'-cyclic-AMP phosphodiesterase
IUBMB Comments
Requires Mg2+ or Mn2+ for activity . This enzyme is specific for 3',5'-cAMP and does not hydrolyse other nucleoside 3',5'-cyclic phosphates such as cGMP (cf. EC 3.1.4.17, 3,5-cyclic-nucleotide phosphodiesterase and EC 3.1.4.35, 3,5-cyclic-GMP phosphodiesterase). It is involved in modulation of the levels of cAMP, which is a mediator in the processes of cell transformation and proliferation .
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Mus musculus
UNIPROT: Q01063
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Word Map
The taxonomic range for the selected organisms is: Mus musculus
The enzyme appears in selected viruses and cellular organisms
Synonyms
pde4b, phosphodiesterase 4, phosphodiesterase-4, camp-phosphodiesterase, camp-specific phosphodiesterase, pde4d3, pde4d5, phosphodiesterase type 4, pde7b, pde7a, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
adenosine 3',5'-cyclic monophosphate PDE
-
-
adenosine 3',5'-cyclicmonophosphate-specific PDE
-
-
cAMP-PDE
-
-
cAMP-phosphodiesterase
-
-
cAMP-phosphodiesterase 1C
-
-
cAMP-specific cyclic nucleotide phosphodiesterase
-
cAMP-specific PDE
-
cAMP-specific phosphodiesterase
-
-
cAMP-specific phosphodiesterase 4D11
-
PDE1C
-
-
PDE4A
-
isozyme
PDE4B
PDE4B5
-
PDE4B5, a novel, super-short, brain-specific cAMP phosphodiesterase-4 variant whose isoform-specifying N-terminal region is identical to that of cAMP phosphodiesterase-4D6
PDE4D11
isoform
PDE4D3
-
isoform
PDE7A1
-
-
PDE7B
PDE8B
-
-
phosphodiesterase 4
-
-
phosphodiesterase-4
-
-
PATHWAY SOURCE
PATHWAYS
SYSTEMATIC NAME
IUBMB Comments
3',5'-cyclic-AMP 5'-nucleotidohydrolase
Requires Mg2+ or Mn2+ for activity [2]. This enzyme is specific for 3',5'-cAMP and does not hydrolyse other nucleoside 3',5'-cyclic phosphates such as cGMP (cf. EC 3.1.4.17, 3,5-cyclic-nucleotide phosphodiesterase and EC 3.1.4.35, 3,5-cyclic-GMP phosphodiesterase). It is involved in modulation of the levels of cAMP, which is a mediator in the processes of cell transformation and proliferation [3].
CAS REGISTRY NUMBER
COMMENTARY hide
9036-21-9
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
3',5'-cAMP + H2O
5'-AMP
show the reaction diagram
adenosine 3',5'-cyclic phosphate + H2O
adenosine 5'-phosphate
show the reaction diagram
cAMP + H2O
5'-AMP
show the reaction diagram
-
isoform PDE7A1 possesses a non-catalytic activity that can contribute to the termination of cAMP signals via direct inhibition of C subunit of cAMP-dependent protein kinase
-
-
?
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
3',5'-cAMP + H2O
5'-AMP
show the reaction diagram
adenosine 3',5'-cyclic phosphate + H2O
adenosine 5'-phosphate
show the reaction diagram
-
both PDE8A and 8B hydrolyze cAMP with a very high affinity
-
-
?
additional information
?
-
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
3-isobutyl-1-methyl-xanthine
-
3-isobutyl-1-methylxanthine
4-(3,4-dimethoxy-phenyl)-4a,5,8,8a-tetrahydro-2H-phthalazin-1-one
-
PDE4 inhibitor, potent inhibitor of isoform PDE4D3
4-(3,4-dimethoxyphenyl)-2-{5-[(2-{5-[2-(2-fluoro-5-methoxyphenyl)ethyl]tetrahydrofuran-2-yl}ethyl)amino]pentyl}-4a,5,8,8a-tetrahydrophthalazin-1(2H)-one
-
the dual PDE4 inhibitor/selective serotonin reuptake inhibitor shows potent and selective serotonin reuptake inhibition
AWD 12-281
-
selective PDE4 inhibitor
ayanin
-
i.e. quercetin-3,7,4'-O-trimethylether, non-selective phosphodiesterase 1-4 inhibitor
carboxyamidotriazole
-
non-selective inhibition
cilomilast
-
-
dipyridamole
erythro-9-[3-(2-hydroxynonyl)]-adenine
-
IBMX
non-selective PDE inhibitor
IC86340
-
-
-
imperatorin
-
potent PFE4 inhibitor, imperatorin is significantly more active against PDE4B than PDE4A
isobutylmethylxanthine
Milrinone
0.1 mM, 93% inhibition
papaverine
PF-04957325
-
a selective PDE8 inhibitor
Ro 20-1724
RO 201724
-
-
roflumilast
-
-
rolipram
zaprinast
additional information
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
isoproterenol
-
PDE4 activity is stimulated with 0.01 mM isoproterenol
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0032
3',5'-cAMP
-
-
0.00003 - 0.0092
adenosine 3',5'-cyclic phosphate
Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.000002
4-(3,4-dimethoxyphenyl)-2-{5-[(2-{5-[2-(2-fluoro-5-methoxyphenyl)ethyl]tetrahydrofuran-2-yl}ethyl)amino]pentyl}-4a,5,8,8a-tetrahydrophthalazin-1(2H)-one
-
isoform PDE4D3, pH and temperature not specified in the publication
0.000097
cilomilast
-
-
0.0183 - 0.0493
diazepam
0.0076
RO 201724
-
-
0.000324 - 0.002
rolipram
IC50 VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.00381
3-isobutyl-1-methyl-xanthine
Mus musculus
pH 7.4, 30°C
0.0021 - 0.0045
3-isobutyl-1-methylxanthine
0.00159 - 0.0262
carboxyamidotriazole
0.000114
cilomilast
Mus musculus
-
-
0.0094 - 0.043
diazepam
0.00051 - 0.042
dipyridamole
0.13
erythro-9-[3-(2-hydroxynonyl)]-adenine
Mus musculus
-
0.0125 - 0.174
papaverine
0.0000002 - 0.0000007
PF-04957325
0.0000131 - 0.18
rolipram
0.035 - 0.044
SCH51866
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
SwissProt
Manually annotated by BRENDA team
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
PDE4D11 expression levels increase in the cerebellum with progressive age
Manually annotated by BRENDA team
highest expression in testis, followed by eye, liver, skeletal muscle, heart, 7-day embryo, kidney, ovary, and brain in decreasing order
Manually annotated by BRENDA team
-
lowering cyclic adenosine-3',5'-monophosphate levels by expression of a cAMP-specific phosphodiesterase decreases intrinsic pulsatile gonadotropin-releasing hormone secretion from GT1 cells
Manually annotated by BRENDA team
-
macrophage cell
Manually annotated by BRENDA team
-
PDE4B. Ablation of PDE4B partially protects mice from LPS-induced shock
Manually annotated by BRENDA team
highest expression level
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
-
colocalization of isoform PDE7A1 with protein kinase II in the golgi-centrosome region
Manually annotated by BRENDA team
-
colocalization of isoform PDE7A1 with protein kinase II in the golgi-centrosome region
Manually annotated by BRENDA team
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
malfunction
metabolism
-
a transmembrane-adenylyl-cyclase-cAMP-protein kinase A cascade modulated by isoform PDE1C is critical in regulating platelet-derived growth factor -receptor-beta degradation
physiological function
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
PDE4D_MOUSE
747
0
84563
Swiss-Prot
other Location (Reliability: 1)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
50000
x * 50000, PDE7A2, calculated from sequence
50100
x * 50100, calculated from sequence
56000
-
gel filtration, sucrose density gradient centrifugation
57000
x * 57000, PDE7A1, calculated from sequence
58000
-
-
79030
calculated from amino acid sequence
83000
x * 83000, SDS-PAGE
93000
x * 93000, SDS-PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
-
isoform PDE7A1 associates with the dissociated C subunit of cAMP dependent protein kinase, but does not bind tetrameric protein kinase holoenzyme. Binding of protein kinase C subunit inhibits kinase activity in vitro, the N-terminal repeat region f PDE7A1 is sufficient for inhibition
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
H305P
-
the mutation is associated with micronodular adrenocortical disease
additional information
-
generation of PDE8B KO mice, that show elevated levels of urinary corticosterone in both basal and stressed conditions compared with their littermate wild-type controls
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Neuro-2A and NIH-3T3 cells
expressed in Schizosaccharomyces pombe
-
expression in Sf9 insect cells
PDE7B protein is expressed in a baculovirus expression system
EXPRESSION
ORGANISM
UNIPROT
LITERATURE
isoform PDE1C expression is low in contractile smooth muscle cells but drastically elevated in synthetic smooth muscle cells in vitro and in various mouse vascular injury models in vivo
-
isoforms PDE1B, PDE1C, PDE2A, PDE4A, PDE4D, PDE5A, PDE7A, PDE8A, PDE8B, PDE10A, and PDE11A show an age-related increase or decrease in mRNA expression in at least 1 of the 4 brain regions examined (hippocampus, cortex, striatum, and cerebellum). mRNA expression of isoforms PDE1A, PDE3A, PDE3B, PDE4B, PDE7A, PDE7B, and PDE9A does not change with age
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
medicine
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Giorgi, M.; Caniglia, C.; Scarsella, G.; Augusti-Tocco, G.
Characterization of 3':5' cyclic nucleotide phosphodiesterase activities of mouse neuroblastoma N18TG2 cells
FEBS Lett.
324
76-80
1993
Mus musculus
Manually annotated by BRENDA team
Dlaboga, D.; Hajjhussein, H.; O'Donnell J.M.
Regulation of phosphodiesterase-4 (PDE4) expression in mouse brain by repeated antidepressant treatment: Comparison with rolipram
Brain Res.
1096
104-112
2006
Mus musculus
Manually annotated by BRENDA team
Han, P.; Sonati, P.; Rubin, C.; Michaeli, T.
PDE7A1, a cAMP-specific phosphodiesterase, inhibits cAMP-dependent protein kinase by a direct interaction with C
J. Biol. Chem.
281
15050-15057
2006
Mus musculus
Manually annotated by BRENDA team
Jin, S.L.; Lan, L.; Zoudilova, M.; Conti, M.
Specific role of phosphodiesterase 4B in lipopolysaccharide-induced signaling in mouse macrophages
J. Immunol.
175
1523-1531
2005
Mus musculus
Manually annotated by BRENDA team
Cheung, Y.F.; Kan, Z.; Garrett-Engele, P.; Gall, I.; Murdoch, H.; Baillie, G.S.; Camargo, L.M.; Johnson, J.M.; Houslay, M.D.; Castle, J.C.
PDE4B5, a novel, super-short, brain-specific cAMP phosphodiesterase-4 variant whose isoform-specifying N-terminal region is identical to that of cAMP phosphodiesterase-4D6 (PDE4D6)
J. Pharmacol. Exp. Ther.
322
600-609
2007
Mus musculus, Homo sapiens (Q07343), Homo sapiens
Manually annotated by BRENDA team
Brown, D.M.; Hutchison, L.; Donaldson, K.; MacKenzie, S.J.; Dick, C.A.; Stone, V.
The effect of oxidative stress on macrophages and lung epithelial cells: the role of phosphodiesterases 1 and 4
Toxicol. Lett.
168
1-6
2007
Homo sapiens, Mus musculus
Manually annotated by BRENDA team
Gardner, C.; Robas, N.; Cawkill, D.; Fidock, M.
Cloning and characterization of the human and mouse PDE7B, a novel cAMP-specific cyclic nucleotide phosphodiesterase
Biochem. Biophys. Res. Commun.
272
186-192
2000
Homo sapiens (Q9NP56), Homo sapiens, Mus musculus (Q9QXQ1), Mus musculus
Manually annotated by BRENDA team
Cherry, J.A.; Thompson, B.E.; Pho, V.
Diazepam and rolipram differentially inhibit cyclic AMP-specific phosphodiesterases PDE4A1 and PDE4B3 in the mouse
Biochim. Biophys. Acta
1518
27-35
2001
Mus musculus (O89084), Mus musculus (Q9QXI7), Mus musculus
Manually annotated by BRENDA team
Houslay, M.D.; Baillie, G.S.; Maurice, D.H.
cAMP-Specific phosphodiesterase-4 enzymes in the cardiovascular system: a molecular toolbox for generating compartmentalized cAMP signaling
Circ. Res.
100
950-966
2007
Homo sapiens (P27815), Homo sapiens (Q07343), Homo sapiens (Q08499), Mus musculus (Q01063)
Manually annotated by BRENDA team
Horvath, A.; Giatzakis, C.; Tsang, K.; Greene, E.; Osorio, P.; Boikos, S.; Libe, R.; Patronas, Y.; Robinson-White, A.; Remmers, E.; Bertherat, J.; Nesterova, M.; Stratakis, C.A.
A cAMP-specific phosphodiesterase (PDE8B) that is mutated in adrenal hyperplasia is expressed widely in human and mouse tissues: a novel PDE8B isoform in human adrenal cortex
Eur. J. Hum. Genet.
16
1245-1253
2008
Homo sapiens, Homo sapiens (O95263), Mus musculus
Manually annotated by BRENDA team
Yoshida, H.; Beltran-Parrazal, L.; Butler, P.; Conti, M.; Charles, A.C.; Weiner, R.I.
Lowering cyclic adenosine-3',5'-monophosphate (cAMP) levels by expression of a cAMP-specific phosphodiesterase decreases intrinsic pulsatile gonadotropin-releasing hormone secretion from GT1 cells
Mol. Endocrinol.
17
1982-1990
2003
Mus musculus
Manually annotated by BRENDA team
Soderling, S.H.; Bayuga, S.J.; Beavo, J.A.
Cloning and characterization of a cAMP-specific cyclic nucleotide phosphodiesterase
Proc. Natl. Acad. Sci. USA
95
8991-8996
1998
Mus musculus (O88502), Mus musculus
Manually annotated by BRENDA team
Hetman, J.M.; Soderling, S.H.; Glavas, N.A.; Beavo, J.A.
Cloning and characterization of PDE7B, a cAMP-specific phosphodiesterase
Proc. Natl. Acad. Sci. USA
97
472-476
2000
Mus musculus (P70453), Mus musculus (Q9QXQ1)
Manually annotated by BRENDA team
Lynex, C.N.; Li, Z.; Chen, M.L.; Toh, K.Y.; Low, R.W.; Goh, D.L.; Tay, S.K.
Identification and molecular characterization of a novel PDE4D11 cAMP-specific phosphodiesterase isoform
Cell. Signal.
20
2247-2255
2008
Mus musculus (B1PSD9), Mus musculus
Manually annotated by BRENDA team
Ivey, F.D.; Demirbas, D.; Allain, C.; Hoffmann, C.S.
Development of a fission yeast-based high-throughput screen to identify chemical regulators of cAMP phosphodiesterases
J. Biomol. Screen.
13
62-71
2008
Mus musculus
Manually annotated by BRENDA team
Nishi, A.; Kuroiwa, M.; Miller, D.B.; O'Callaghan, J.P.; Bateup, H.S.; Shuto, T.; Sotogaku, N.; Fukuda, T.; Heintz, N.; Greengard, P.; Snyder, G.L.
Distinct roles of PDE4 and PDE10A in the regulation of cAMP/PKA signaling in the striatum
J. Neurosci.
28
10460-10471
2008
Mus musculus
Manually annotated by BRENDA team
De Arcangelis, V.; Soto, D.; Xiang, Y.
Phosphodiesterase 4 and phosphatase 2A differentially regulate cAMP/protein kinase a signaling for cardiac myocyte contraction under stimulation of beta1 adrenergic receptor
Mol. Pharmacol.
74
1453-1462
2008
Mus musculus
Manually annotated by BRENDA team
Lee, F.P.; Shih, C.M.; Shen, H.Y.; Chen, C.M.; Chen, C.M.; Ko, W.C.
Ayanin, a non-selective phosphodiesterase 1-4 inhibitor, effectively suppresses ovalbumin-induced airway hyperresponsiveness without affecting xylazine/ketamine-induced anesthesia
Eur. J. Pharmacol.
635
198-203
2010
Mus musculus
Manually annotated by BRENDA team
Cashman, J.R.; Voelker, T.; Zhang, H.T.; ODonnell, J.M.
Dual inhibitors of phosphodiesterase-4 and serotonin reuptake
J. Med. Chem.
52
1530-1539
2009
Mus musculus
Manually annotated by BRENDA team
Tsai, L.C.; Shimizu-Albergine, M.; Beavo, J.A.
The high-affinity cAMP-specific phosphodiesterase 8B controls steroidogenesis in the mouse adrenal gland
Mol. Pharmacol.
79
639-648
2011
Mus musculus
Manually annotated by BRENDA team
Kelly, M.P.; Adamowicz, W.; Bove, S.; Hartman, A.J.; Mariga, A.; Pathak, G.; Reinhart, V.; Romegialli, A.; Kleiman, R.J.
Select 3,5-cyclic nucleotide phosphodiesterases exhibit altered expression in the aged rodent brain
Cell. Signal.
26
383-397
2014
Mus musculus, Rattus norvegicus
Manually annotated by BRENDA team
Mika, D.; Richter, W.; Westenbroek, R.E.; Catterall, W.A.; Conti, M.
PDE4B mediates local feedback regulation of beta1-adrenergic cAMP signaling in a sarcolemmal compartment of cardiac myocytes
J. Cell Sci.
127
1033-1042
2014
Mus musculus
Manually annotated by BRENDA team
Cai, Y.; Nagel, D.J.; Zhou, Q.; Cygnar, K.D.; Zhao, H.; Li, F.; Pi, X.; Knight, P.A.; Yan, C.
Role of cAMP-phosphodiesterase 1C signaling in regulating growth factor receptor stability, vascular smooth muscle cell growth, migration, and neointimal hyperplasia
Circ. Res.
116
1120-1132
2015
Homo sapiens, Mus musculus, Rattus norvegicus
Manually annotated by BRENDA team
Guo, L.; Luo, L.; Ju, R.; Chen, C.; Zhu, L.; Li, J.; Yu, X.; Ye, C.; Zhang, D.
Carboxyamidotriazole A novel inhibitor of both cAMP-phosphodiesterases and cGMP-phosphodiesterases
Eur. J. Pharmacol.
746
14-21
2015
Mus musculus, Rattus norvegicus
Manually annotated by BRENDA team