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Information on EC 3.1.4.35 - 3',5'-cyclic-GMP phosphodiesterase and Organism(s) Dictyostelium discoideum and UniProt Accession Q8MLZ3

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EC Tree
     3 Hydrolases
         3.1 Acting on ester bonds
             3.1.4 Phosphoric-diester hydrolases
                3.1.4.35 3',5'-cyclic-GMP phosphodiesterase
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This record set is specific for:
Dictyostelium discoideum
UNIPROT: Q8MLZ3 not found.
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Word Map
The taxonomic range for the selected organisms is: Dictyostelium discoideum
The expected taxonomic range for this enzyme is: Eukaryota, Bacteria
Synonyms
phosphodiesterase type 5, phosphodiesterase-5, pde-5, phosphodiesterase 5, cgmp phosphodiesterase, pde5a, cyclic gmp phosphodiesterase, phosphodiesterase type-5, pde6b, cgmp-phosphodiesterase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
cGMP phosphodiesterase
-
3',5'-cyclic GMP phosphodiesterase
-
-
-
-
cGMP phosphodiesterase
-
-
-
-
cGMP-PDE
-
-
-
-
cGMP-selective phosphodiesterase
-
-
cyclic 3',5'-GMP phosphodiesterase
-
-
-
-
cyclic GMP phosphodiesterase
-
-
-
-
cyclic guanosine 3',5'-monophosphate phosphodiesterase
-
-
-
-
cyclic guanosine 3',5'-phosphate phosphodiesterase
-
-
-
-
guanosine cyclic 3',5'-phosphate phosphodiesterase
-
-
-
-
phosphodiesterase cGMP
-
-
-
-
phosphodiesterase, guanosine cyclic 3',5'-phosphate
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hydrolysis of phosphoric ester
-
-
-
-
PATHWAY SOURCE
PATHWAYS
SYSTEMATIC NAME
IUBMB Comments
3',5'-cyclic-GMP 5'-nucleotidohydrolase
-
CAS REGISTRY NUMBER
COMMENTARY hide
9068-52-4
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
guanosine 3',5'-cyclic phosphate + H2O
guanosine 5'-phosphate
show the reaction diagram
-
-
?
cGMP + H2O
5'-GMP
show the reaction diagram
-
degradation of intracellular cGMP
-
-
?
guanosine 3',5'-cyclic phosphate + H2O
guanosine 5'-phosphate
show the reaction diagram
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
guanosine 3',5'-cyclic phosphate + H2O
guanosine 5'-phosphate
show the reaction diagram
-
-
?
guanosine 3',5'-cyclic phosphate + H2O
guanosine 5'-phosphate
show the reaction diagram
-
very low activity with cAMP
-
?
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Mg2+
-
required for activity, maximal activity at 3-10 mM MgCl2
Mn2+
-
approx. 2.5fold higher activation than with Mg2+, maximal activity at 3-10 mM Mn2+
additional information
Zn+-binding motif
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
3-isobutyl-1-methylxanthine
-
0.06 mM, 50% inhibition
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
additional information
-
not activated by 8-bromo-cGMP
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.00022 - 1.6
cGMP
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
strains NC4, XP55 and NP377
SwissProt
Manually annotated by BRENDA team
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
PDE5_DICDI
867
0
97992
Swiss-Prot
other Location (Reliability: 5)
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expression of PdeD-YFP fusion protein in Escherichia coli and Dictyostelium
expression of DdPDE3 catalytic domain in Escherichia coli and Dictyostelium
-
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Kuwayama, H.; Snippe, H.; Derks, M.; Roelofs, J.; Van Haastert, P.J.
Identification and characterization of DdPDE3, a cGMP-selective phosphodiesterase from Dictyostelium
Biochem. J.
353
635-644
2001
Dictyostelium discoideum
Manually annotated by BRENDA team
Meima, M.E.; Biondi, R.M.; Schaap, P.
Identification of a novel type of cGMP phosphodiesterase that is defective in the chemotactic stmF mutants
Mol. Biol. Cell
13
3870-3877
2002
Dictyostelium discoideum (Q8MLZ3)
Manually annotated by BRENDA team
Bader, S.; Kortholt, A.; Van Haastert, P.J.
Seven Dictyostelium discoideum phosphodiesterases degrade three pools of cAMP and cGMP
Biochem. J.
402
153-161
2007
Dictyostelium discoideum
Manually annotated by BRENDA team