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Information on EC 3.1.3.93 - L-galactose 1-phosphate phosphatase
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3.1.3.93 L-galactose 1-phosphate phosphataseIUBMB Comments
The enzyme from plants also has the activity of EC 3.1.3.25, inositol-phosphate phosphatase. The enzymes have very low activity with D-galactose 1-phosphate (cf. EC 3.1.3.94, D-galactose 1-phosphate phosphatase).
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Word Map
- 3.1.3.93
-
monophosphatase
- inositol
- polysaccharide
- histidinol
-
histidinol-phosphate
- phosphatidylinositol
-
phytic
The expected taxonomic range for this enzyme is: Bacteria, Eukaryota
Synonyms
At3g02870, GPP, IMPL2, L-Gal-1-P phosphatase, L-Gal-1-Pase, L-galactose-1-phosphate phosphatase, VTC4, 
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SYNONYM 
ORGANISM
UNIPROT
COMMENTARY 
LITERATURE
At3g02870
GPP
IMPL2
L-Gal-1-P phosphatase
L-Gal-1-Pase
L-galactose-1-phosphate phosphatase
VTC4
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REACTION
REACTION DIAGRAM
COMMENTARY
ORGANISM
UNIPROT
LITERATURE
beta-L-galactose 1-phosphate + H2O = L-galactose + phosphate
-
-
-
-
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PATHWAY SOURCE
PATHWAYS
BRENDA
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SYSTEMATIC NAME
IUBMB Comments
beta-L-galactose-1-phosphate phosphohydrolase
The enzyme from plants also has the activity of EC 3.1.3.25, inositol-phosphate phosphatase. The enzymes have very low activity with D-galactose 1-phosphate (cf. EC 3.1.3.94, D-galactose 1-phosphate phosphatase).
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SUBSTRATE
PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate)
(Substrate)
LITERATURE
(Substrate)
(Substrate)
COMMENTARY
(Product)
(Product)
LITERATURE
(Product)
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
r=reversible
ir=irreversible
?=not specified
alpha-D-glucose 1-phosphate + H2O
alpha-D-glucose + phosphate
19% of the activity with myo-inositol
-
-
?
D-galactose 1-phosphate + H2O
D-galactose + phosphate
16.6% of the activity with myo-inositol
-
-
?
glycerol 2-phosphate + H2O
glycerol + phosphate
52% of the activity with myo-inositol
-
-
?
additional information
?
-
Fru 1-phosphate, Fru 1,6-bisphosphate, Glc 6-phosphate, D-alpha-glycerophosphate, sorbitol 6-phosphate, and myo-inositol 2-V show little to no hydrolysis in assays
-
-
?
beta-L-galactose 1-phosphate + H2O
L-galactose + phosphate
highly specific for beta-L-galactose 1-phosphate
-
-
?
beta-L-galactose 1-phosphate + H2O
L-galactose + phosphate
-
highly specific for beta-L-galactose 1-phosphate
-
-
?
beta-L-galactose 1-phosphate + H2O
L-galactose + phosphate
highly specific for beta-L-galactose 1-phosphate
-
-
?
beta-L-galactose 1-phosphate + H2O
L-galactose + phosphate
166-240% of the activity with myo-inositol
-
-
?
beta-L-galactose 1-phosphate + H2O
L-galactose + phosphate
highly specific for beta-L-galactose 1-phosphate
-
-
?
myo-inositol 1-phosphate + H2O
myo-inositol + phosphate
9% of the activity with beta-L-galactose
-
-
?
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NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate)
(Substrate)
LITERATURE
(Substrate)
(Substrate)
COMMENTARY
(Product)
(Product)
LITERATURE
(Product)
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
r=reversible
ir=irreversible
?=not specified
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METALS and IONS
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
Mg2+
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INHIBITOR
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
IMAGE
EDTA
no activity is found in the presence of 0.2 mM EDTA without added Mg2+, native enzyme
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KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
IMAGE
0.01
beta-L-galactose 1-phosphate
pH 7.0, 30°C, 1.8 mM Mg2+, native enzyme
0.15
beta-L-galactose 1-phosphate
pH 7.0, 30°C, recombinant enzyme
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Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
IMAGE
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SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
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pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
7.5
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pH RANGE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
6.5 - 7.8
pH 6.5: about 70% of maximal activity, pH 7.8: about 0% of maximal activity
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pI VALUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
bifunctional L-galactose 1-phosphate phosphatase/myo-inositol monophosphatase
UniProt
brenda
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
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GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
metabolism
-
enzyme overexpression leads to a greater increase in rice ascorbic acid levels
physiological function
physiological function
a homozygous T-DNA insertion line, which lacks a functional At3g02870 gene product, is ascorbate-deficient and deficient in L-Gal-1-phosphate phosphatase activity. The significantly lower ascorbate and perturbed L-Gal metabolism in the mutant indicate that L-Gal-1-phosphate phosphatase plays a role in plant ascorbate biosynthesis
physiological function
knockout lines of isoform VTC4 exhibit small perturbations in abscisic acid, salt, and cold responses. Less myo-inositol and ascorbate accumulate in these mutants
physiological function
the ascorbic acid contents of enzyme overexpression lines are higher than those of controls
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UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION
The reliability class of the localization prediction ranges from 1 (very reliable) to 5 (not reliable).
The reliability class of the localization prediction ranges from 1 (very reliable) to 5 (not reliable). VTC4_ARATH
271
0
29121
Swiss-Prot
other Location (Reliability: 3)
HIS7_ARATH
346
0
38235
Swiss-Prot
Chloroplast (Reliability: 1)
A0A1Y0XU51_ACEPA
265
0
28769
TrEMBL
-
B3GK03_TOBAC
270
0
29166
TrEMBL
other Location (Reliability: 3)
Q5U789_ACTDE
270
0
29226
TrEMBL
other Location (Reliability: 4)
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MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
58000
x * 58000, SDS-PAGE, fusion proein with glutathione S-transferase
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SUBUNIT
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
dimer
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PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
P92L
mutant shows decreased ascorbate synthesis. The mutation is predicted to disrupt the positioning of catalytic amino acid residues within the active site. Accordingly, L-Gal-1-phoshate phosphatase activity in the mutant is about 50% of wild-type plants. In addition, mutant plants incorporate significantly more radiolabelfrom [2-3H]Man into L-galactosyl residues suggesting that the mutation increases the availability of GDP-L-Gal for polysaccharide synthesis
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PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
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CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
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EXPRESSION
ORGANISM
UNIPROT
LITERATURE
mRNA and protein expression are clearly correlated with L-ascorbic acid contents of cells during culture
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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Conklin, P.L.; Gatzek, S.; Wheeler, G.L.; Dowdle, J.; Raymond, M.J.; Rolinski, S.; Isupov, M.; Littlechild, J.A.; Smirnoff, N.
Arabidopsis thaliana VTC4 encodes L-galactose-1-P phosphatase, a plant ascorbic acid biosynthetic enzyme
J. Biol. Chem.
281
15662-15670
2006
Arabidopsis thaliana (Q9M8S8), Arabidopsis thaliana
brenda
Torabinejad, J.; Donahue, J.L.; Gunesekera, B.N.; Allen-Daniels, M.J.; Gillaspy, G.E.
VTC4 is a bifunctional enzyme that affects myoinositol and ascorbate biosynthesis in plants
Plant Physiol.
150
951-961
2009
Arabidopsis thaliana (Q9M8S8)
brenda
Laing, W.A.; Bulley, S.; Wright, M.; Cooney, J.; Jensen, D.; Barraclough, D.; MacRae, E.
A highly specific L-galactose-1-phosphate phosphatase on the path to ascorbate biosynthesis
Proc. Natl. Acad. Sci. USA
101
16976-16981
2004
Actinidia deliciosa (Q5U789), Arabidopsis thaliana (Q9M8S8), Arabidopsis thaliana Columbia-1 (Q9M8S8)
brenda
Sakamoto, S.; Fujikawa, Y.; Tanaka, N.; Esaka, M.
Molecular cloning and characterization of L-galactose-1-phosphate phosphatase from tobacco (Nicotiana tabacum)
Biosci. Biotechnol. Biochem.
76
1155-1162
2012
Nicotiana tabacum (B3GK03)
brenda
Castro, J.; Cobos, M.; Maddox, J.; Iman, S.; Egoavil, A.; Torres, J.; Gutierrez, F.
Gene expression and enzyme activities of the D-mannose/L-galactose pathway influence L-ascorbic acid content in Myrciaria dubia
Biol. Plant.
59
783-787
2015
Myrciaria dubia
-
brenda
Zhang, G.Y.; Liu, R.R.; Zhang, C.Q.; Tang, K.X.; Sun, M.F.; Yan, G.H.; Liu, Q.Q.
Manipulation of the rice L-galactose pathway evaluation of the effects of transgene overexpression on ascorbate accumulation and abiotic stress tolerance
PLoS ONE
10
e0125870
2015
Oryza sativa
brenda
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