Any feedback?
Please rate this page
(enzyme.php)
(0/150)

BRENDA support

Reference on EC 3.1.13.3 - oligonucleotidase

Please use the Reference Search for a specific query.
Please wait a moment until all data is loaded. This message will disappear when all data is loaded.
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Futai, M.; Mizuno, D.
A new phosphodiesterase forming nucleoside 5'-monophosphate from rat liver. Its partial purification and substrate specificity for nicotinamide adenine dinucleotide and oligonucleotides
J. Biol. Chem.
242
5301-5307
1967
Rattus norvegicus
Manually annotated by BRENDA team
Niyogi, S.K.; Datta, A.K.
A novel oligoribonuclease of Escherichia coli. I. Isolation and properties
J. Biol. Chem.
250
7307-7312
1975
Escherichia coli
Manually annotated by BRENDA team
Datta, A.K.; Niyogi, S.N.
A novel oligoribonuclease of Escherichia coli. II. Mechanism of action
J. Biol. Chem.
250
7313-7319
1975
Escherichia coli
Manually annotated by BRENDA team
Elson,D.
Latent enzymic activity of a ribonucleoprotein isolated from Escherichia coli
Biochim. Biophys. Acta
36
372-386
1959
Escherichia coli
Manually annotated by BRENDA team
Kurosawa, S.; Shimabuku, A.M.; Ishizawa, H.; Sen, K.
Oligonucleotidase activity of phosphodiesterase from the fruit body of Flammulina velutipes
Agric. Biol. Chem.
54
587-592
1990
Flammulina velutipes
Manually annotated by BRENDA team
Yu, D.; Deutscher, M.P.
Oligoribonuclease is distinct from the other known exoribonucleases of Escherichia coli
J. Bacteriol.
177
4137-4139
1995
Escherichia coli
Manually annotated by BRENDA team
Zhang, X.; Zhu, L.; Deutscher, M.P.
Oligoribonuclease is encoded by a highly conserved gene in the 3'-5' exonuclease superfamily
J. Bacteriol.
180
2779-2781
1998
Escherichia coli
Manually annotated by BRENDA team
Ghosh, S.; Deutscher, M.P.
Oligoribonuclease is an essential component of the mRNA decay pathway
Proc. Natl. Acad. Sci. USA
96
4372-4377
1999
Escherichia coli
Manually annotated by BRENDA team
Fiedler, T.J.; Vincent, H.A.; Zuo, Y.; Gavrialov, O.; Malhotra, A.
Purification and crystallization of Escherichia coli oligoribonuclease
Acta Crystallogr. Sect. D
60
736-739
2004
Escherichia coli
Manually annotated by BRENDA team
Wu, Y.Y.; Chin, K.H.; Chou, C.C.; Lee, C.C.; Shr, H.L.; Gao, F.P.; Lyu, P.C.; Wang, A.H.; Chou, S.H.
Cloning, purification, crystallization and preliminary X-ray crystallographic analysis of XC847, a 3'-5' oligoribonuclease from Xanthomonas campestris
Acta Crystallogr. Sect. F
61
902-905
2005
Xanthomonas campestris
Manually annotated by BRENDA team
Zhang, X.X.; Lilley, A.K.; Bailey, M.J.; Rainey, P.B.
Functional and phylogenetic analysis of a plant-inducible oligoribonuclease (orn) gene from an indigenous Pseudomonas plasmid
Microbiology
150
2889-2898
2004
Pseudomonas sp.
Manually annotated by BRENDA team
Mechold, U.; Ogryzko, V.; Ngo, S.; Danchin, A.
Oligoribonuclease is a common downstream target of lithium-induced pAp accumulation in Escherichia coli and human cells
Nucleic Acids Res.
34
2364-2373
2006
Homo sapiens, Escherichia coli (P0A784), Escherichia coli
Manually annotated by BRENDA team
Mechold, U.; Fang, G.; Ngo, S.; Ogryzko, V.; Danchin, A.
YtqI from Bacillus subtilis has both oligoribonuclease and pAp-phosphatase activity
Nucleic Acids Res.
35
4552-4561
2007
Bacillus subtilis, Escherichia coli
Manually annotated by BRENDA team
Young Park, A.; Elvin, C.M.; Hamdan, S.M.; Wood, R.J.; Liyou, N.E.; Hamwood, T.E.; Jennings, P.A.; Dixon, N.E.
Hydrolysis of the 5-p-nitrophenyl ester of TMP by oligoribonucleases (ORN) from Escherichia coli, Mycobacterium smegmatis, and human
Protein Expr. Purif.
57
180-187
2008
Escherichia coli, Homo sapiens, Mycolicibacterium smegmatis
Manually annotated by BRENDA team
Chin, K.; Yang, C.; Chou, C.; Wang, A.H.; Chou, S.
The crystal structure of XC847 from Xanthomonas campestris: A 3-5 oligoribonuclease of DnaQ fold family with a novel opposingly shifted helix
Proteins Struct. Funct. Bioinform.
65
1036-1040
2006
Xanthomonas campestris
Manually annotated by BRENDA team
Zuo, Y.; Zheng, H.; Wang, Y.; Chruszcz, M.; Cymborowski, M.; Skarina, T.; Savchenko, A.; Malhotra, A.; Minor, W.
Crystal structure of RNase T, an exoribonuclease involved in tRNA maturation and end turnover
Structure
15
417-428
2007
Escherichia coli (P30014), Escherichia coli, Pseudomonas aeruginosa (Q9HY82), Pseudomonas aeruginosa
Manually annotated by BRENDA team
Sello, J.K.; Buttner, M.J.
The oligoribonuclease gene in Streptomyces coelicolor is not transcriptionally or translationally coupled to adpA, a key bldA target
FEMS Microbiol. Lett.
286
60-65
2008
Streptomyces coelicolor
Manually annotated by BRENDA team
Liu, M.F.; Cescau, S.; Mechold, U.; Wang, J.; Cohen, D.; Danchin, A.; Boulouis, H.J.; Biville, F.
Identification of a novel nanoRNase in Bartonella
Microbiology
158
886-895
2012
Bartonella birtlesii (G4VUY7), Bartonella birtlesii, Bartonella birtlesii IBS 325 (G4VUY7), Bartonella henselae
Manually annotated by BRENDA team
Bruni, F.; Gramegna, P.; Oliveira, J.M.; Lightowlers, R.N.; Chrzanowska-Lightowlers, Z.M.
REXO2 is an oligoribonuclease active in human mitochondria
PLoS ONE
8
e64670
2013
Homo sapiens (Q9Y3B8), Homo sapiens
Manually annotated by BRENDA team
Chen, F.; Chen, G.; Liu, Y.; Jin, Y.; Cheng, Z.; Liu, Y.; Yang, L.; Jin, S.; Wu, W.
Pseudomonas aeruginosa oligoribonuclease contributes to Tolerance to ciprofloxacin by regulating pyocin biosynthesis
Antimicrob. Agents Chemother.
61
e02256-16
2017
Pseudomonas aeruginosa (Q02F67), Pseudomonas aeruginosa
Manually annotated by BRENDA team
Cohen, D.; Mechold, U.; Nevenzal, H.; Yarmiyhu, Y.; Randall, T.E.; Bay, D.C.; Rich, J.D.; Parsek, M.R.; Kaever, V.; Harrison, J.J.; Banin, E.
Oligoribonuclease is a central feature of cyclic diguanylate signaling in Pseudomonas aeruginosa
Proc. Natl. Acad. Sci. USA
112
11359-11364
2015
Pseudomonas aeruginosa (P57665), Pseudomonas aeruginosa, Pseudomonas aeruginosa ATCC 15692 (P57665), Pseudomonas aeruginosa 1C (P57665), Pseudomonas aeruginosa PRS 101 (P57665), Pseudomonas aeruginosa DSM 22644 (P57665), Pseudomonas aeruginosa CIP 104116 (P57665), Pseudomonas aeruginosa LMG 12228 (P57665), Pseudomonas aeruginosa JCM 14847 (P57665)
Manually annotated by BRENDA team
Orr, M.W.; Donaldson, G.P.; Severin, G.B.; Wang, J.; Sintim, H.O.; Waters, C.M.; Lee, V.T.
Oligoribonuclease is the primary degradative enzyme for pGpG in Pseudomonas aeruginosa that is required for cyclic-di-GMP turnover
Proc. Natl. Acad. Sci. USA
112
E5048-E5057
2015
Pseudomonas aeruginosa (Q02F67), Pseudomonas aeruginosa
Manually annotated by BRENDA team
Zhou, J.; Zheng, Y.; Roembke, B.; Robinson, S.; Opoku-Temeng, C.; Sayre, D.; Sintim, H.
Fluorescent analogs of cyclic and linear dinucleotides as phosphodiesterase and oligoribonuclease activity probes
RSC Adv.
7
5421-5426
2017
Pseudomonas aeruginosa (A0A069Q255), Mycolicibacterium smegmatis (A0A8B4R3D6), Escherichia coli (P0A784)
-
Manually annotated by BRENDA team
Lee, C.W.; Park, S.H.; Jeong, C.S.; Cha, S.S.; Park, H.; Lee, J.H.
Structural basis of small RNA hydrolysis by oligoribonuclease (CpsORN) from Colwellia psychrerythraea strain 34H
Sci. Rep.
9
2649
2019
Colwellia psychrerythraea (Q47VZ4), Colwellia psychrerythraea ATCC BAA-681 (Q47VZ4)
Manually annotated by BRENDA team