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Information on EC 3.1.1.4 - phospholipase A2 and Organism(s) Naja atra and UniProt Accession P00598

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EC Tree
     3 Hydrolases
         3.1 Acting on ester bonds
             3.1.1 Carboxylic-ester hydrolases
                3.1.1.4 phospholipase A2
IUBMB Comments
Also acts on phosphatidylethanolamine, choline plasmalogen and phosphatides, removing the fatty acid attached to the 2-position. Requires Ca2+.
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This record set is specific for:
Naja atra
UNIPROT: P00598
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Word Map
The taxonomic range for the selected organisms is: Naja atra
The enzyme appears in selected viruses and cellular organisms
Synonyms
phospholipase a2, cpla2, spla2, spla(2), prdx6, cytosolic phospholipase a2, crotoxin, pla2s, ipla2, spla2-iia, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
14 kDa phospholipase A2
-
-
-
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Agkistrotoxin
-
-
-
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amdI1
-
-
-
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Ammodytin I2
-
-
-
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APLA
-
-
-
-
APP-D-49
-
-
-
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ASPLA1
-
-
-
-
ASPLA10
-
-
-
-
ASPLA11
-
-
-
-
ASPLA12
-
-
-
-
ASPLA13
-
-
-
-
ASPLA14
-
-
-
-
ASPLA15
-
-
-
-
ASPLA16
-
-
-
-
ASPLA17
-
-
-
-
ASPLA2
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-
-
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ASPLA3
-
-
-
-
ASPLA4
-
-
-
-
ASPLA5
-
-
-
-
ASPLA6
-
-
-
-
ASPLA7
-
-
-
-
ASPLA8
-
-
-
-
ASPLA9
-
-
-
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ATX
-
-
-
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Basic protein I/II
-
-
-
-
BJ-PLA2
-
-
-
-
BJUPLA2
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-
-
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BPI/BPII
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-
-
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CaI-PLA2
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-
-
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Caudoxin
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-
-
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cPm09
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-
-
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Enhancing factor
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-
-
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GIIC sPLA2
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-
-
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GIID sPLA2
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-
-
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GIIE sPLA2
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-
-
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GIIF sPLA2
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-
-
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GIII sPLA2
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-
-
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Group IB phospholipase A2
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-
-
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Group IIA phospholipase A2
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-
-
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Group V phospholipase A2
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-
-
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Group VI phospholipase A2
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-
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GVI PLA2
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-
-
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GX sPLA2
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-
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GXII sPLA2
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-
-
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GXIII sPLA2
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-
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iPLA2
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-
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lecithinase A
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-
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MP-III 4R
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-
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Muscarinic inhibitor
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-
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Myotoxin
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-
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NAJPLA-2A
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-
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NAJPLA-2B
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NAJPLA-2C
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natratoxin
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Nigexine
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Non-pancreatic secretory phospholipase A2
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Notechis 11'2
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-
-
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Notexin
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-
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NPLA
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-
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NPS-PLA2
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-
-
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OHV A-PLA2
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-
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OHV-APLA2
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-
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pgPLA 1a/pgPLA 2a
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-
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phosphatidase
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phosphatide 2-acylhydrolase
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phosphatidolipase
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Phosphatidylcholine 2-acylhydrolase
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Phosphatidylcholine 2-acylhydrolase GIIC
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Phosphatidylcholine 2-acylhydrolase GIID
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Phosphatidylcholine 2-acylhydrolase GIIE
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Phosphatidylcholine 2-acylhydrolase GIIF
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Phosphatidylcholine 2-acylhydrolase GIII
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Phosphatidylcholine 2-acylhydrolase GX
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Phosphatidylcholine 2-acylhydrolase GXII
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Phosphatidylcholine 2-acylhydrolase GXIII
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phospholipase A
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phospholipase A2
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Phospholipase A2 inhibitor
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pkP5
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PLA2-10
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-
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PLA2-VI
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PLA2-VII
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PLA2IID
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platelet activating factor acetyl hydrolase
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Pt-PLA1
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Pt-PLA2
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secreted phospholipase A2
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secreted phospholipaseA2 neurotoxin
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Secretory-type PLA, stroma-associated homolog
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sPLA(2)-IID
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-
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sPLA(2)-IIE
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sPLA(2)-IIF
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-
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sPLA2
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TMV-K49
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Toxin VI
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Toxin VI:5
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-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hydrolysis of carboxylic ester
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
phosphatidylcholine 2-acylhydrolase
Also acts on phosphatidylethanolamine, choline plasmalogen and phosphatides, removing the fatty acid attached to the 2-position. Requires Ca2+.
CAS REGISTRY NUMBER
COMMENTARY hide
9001-84-7
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
1,2-dipalmitoyl-phosphatidylcholine + H2O
1-palmitoyl-glycerophosphorylcholine + palmitic acid
show the reaction diagram
-
-
-
?
phospholipids + H2O
?
show the reaction diagram
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
phospholipids + H2O
?
show the reaction diagram
additional information
?
-
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Ca2+
required
Ca2+
-
does only slightly alter the effects of the enzyme on K+ currents, overview
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
4-bromophenacyl bromide
-
enzymatic activity of bromophenacylated PLA2 is approximate 0.06% of that of PLA2
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
7.5
assay at
7.9
-
assay at
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
30
assay at
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
Taiwan cobra
Uniprot
Manually annotated by BRENDA team
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
-
secereted enzyme in venom
-
Manually annotated by BRENDA team
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
physiological function
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
PA2A1_NAJAT
146
0
16013
Swiss-Prot
Secretory Pathway (Reliability: 2)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
13220
-
PLA2-2, SDS-PAGE and mass spectrometry
13260
-
PLA2-1, SDS-PAGE and mass spectrometry
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
purified native enzyme, hanging drop vapour diffusion method, 8°C, X-ray diffraction structure determination and analysis at 2.2 A resolution, molecular replacement method
-
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
N1M
site-directed mutagenesis, the mutants with an extra Met before Asn1 or substituting Asn1 with Met still retain approximately 40.9% and 82.9% membrane-damaging activity of the native enzyme, respectively. Mutations on the N-terminal region do not greatly affect the Ca2+-binding ability but cause a precipitous drop in PLA2 activity. The gross conformation of the mutant is altered compared to the native enzyme, overview. The enzymatic activity of the mutant is approximately 5.3% of that of native PLA2
D97N
-
reduced activity of acidic secretory isoforms PLA2-1 and PLA2-2
H47A
-
no activity of acidic secretory isoforms PLA2-1 and PLA2-2
H47R
-
no activity of acidic secretory isoforms PLA2-1 and PLA2-2
additional information
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
native enzyme from venom by cation and anion exchange chromatography
-
Ni-NTA affinity chromatography
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
DNA and amino acid sequence determination and analysis
into pQE-30 of Escherichia coli
-
RENATURED/Commentary
ORGANISM
UNIPROT
LITERATURE
native PLA2 is labeled with NTSB and then refolded according to the same procedure for refolding of mutated PLA2. The refolded PLA2 exhibited enzymatic activity and electrophoretic mobility indistinguishable from those of native PLA2
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Pan, F.M.; Chao, S.C.; Wu, S.H.; Chang, W.C.; Chiou, S.H.
Characterization of phospholipase A2 (PLA2) from Taiwan Cobra: Isoenzymes and their site-directed mutants
Biochem. Biophys. Res. Commun.
250
154-160
1998
Naja atra
Manually annotated by BRENDA team
Hu, P.; Sun, L.; Zhu, Z.Q.; Hou, X.W.; Wang, S.; Yu, S.S.; Wang, H.L.; Zhang, P.; Wang, M.; Niu, L.W.; Teng, M.K.; Ruan, D.Y.
Crystal structure of Natratoxin, a novel snake secreted phospholipaseA2 neurotoxin from Naja atra venom inhibiting A-type K+ currents
Proteins
72
673-683
2008
Naja atra
Manually annotated by BRENDA team
Chiou, Y.; Cheng, Y.; Kao, P.; Wang, J.; Chang, L.
Mutations on the N-terminal region abolish differentially the enzymatic activity, membrane-damaging activity and cytotoxicity of Taiwan cobra phospholipase A2
Toxicon
51
270-279
2008
Naja atra (P00598), Naja atra
Manually annotated by BRENDA team
Chen, K.C.; Kao, P.H.; Lin, S.R.; Chang, L.S.
Upregulation of Fas and FasL in Taiwan cobra phospholipase A2-treated human neuroblastoma SK-N-SH cells through ROS- and Ca2+-mediated p38 MAPK activation
J. Cell. Biochem.
106
93-102
2009
Naja atra
Manually annotated by BRENDA team
Chen, K.C.; Liu, W.H.; Chang, L.S.
Taiwan cobra phospholipase A2-elicited JNK activation is responsible for autocrine fas-mediated cell death and modulating Bcl-2 and Bax protein expression in human leukemia K562 cells
J. Cell. Biochem.
109
245-254
2010
Naja atra
Manually annotated by BRENDA team