Reference on EC 2.7.7.8 - polyribonucleotide nucleotidyltransferase and Organism(s) Escherichia coli and UniProt Accession P05055
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AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Zhou, Z.; Deutscher, M.P.
An essential function for the phosphate-dependent exoribonucleases RNase PH and polynucleotide phosphorylase
J. Bacteriol.
179
4391-4395
1997
Escherichia coli
Littauer, U.Z.; Soreq, H.
Polynucleotide phosphorylase
The Enzymes, 3rd. Ed. (Boyer, P. D. , ed. )
15B
517-553
1982
Azotobacter vinelandii, Achromobacter sp., Synechococcus elongatus PCC 7942 = FACHB-805, Geobacillus stearothermophilus, Bacillus amyloliquefaciens, Brevibacterium sp., Cavia porcellus, Clostridium perfringens, Escherichia coli, Enterococcus faecalis, Halobacterium salinarum, Micrococcus luteus, Nicotiana tabacum, Rattus norvegicus, Sinorhizobium meliloti, Rhodospirillum rubrum, Streptococcus pyogenes, Thermus aquaticus, Bacillus amyloliquefaciens BaM-2, Achromobacter sp. KR. 170-4
-
Godefroy-Colburn, T.; Grunenberg-Manago, M.
Polynucleotide phosphorylase
The Enzymes, 3rd. Ed. (Boyer, P. D. , ed. )
7
533-574
1972
Ascaris lumbricoides, Auxenochlorella pyrenoidosa, Cavia porcellus, Escherichia coli, Halobacterium salinarum, Homo sapiens, Lactiplantibacillus plantarum, Micrococcus luteus, Neisseria meningitidis, Pseudomonas aeruginosa, Rattus norvegicus, Salmonella enterica subsp. enterica serovar Typhimurium, Spinacia oleracea, Synechococcus elongatus PCC 7942 = FACHB-805, Triticum aestivum
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Soreq, H.; Littauer, U.Z.
Purification and characterization of polynucleotide phosphorylase from Escherichia coli. Probe for the analysis of 3 sequences of RNA
J. Biol. Chem.
252
6885-6888
1977
Escherichia coli
Smith, J.C.; Eaton, M.A.W.
Purification of polynucleotide phosphorylase by affinity chromatography and some properties of the purified enzymes
Nucleic Acids Res.
1
1763-1773
1974
Geobacillus stearothermophilus, Escherichia coli
Carpousis, A.J.; Van Houwe, G.; Ehretsmann, C.; Krisch, H.M.
Copurification of E. coli RNase E and PNPase: evidence for a specific association between two enzymes important in RNA processing and degradation
Cell
76
889-900
1994
Escherichia coli
Lisitsky, I.; Schuster, G.
Preferential degradation of polyadenylated and polyuridinylated RNAs by the bacterial exoribonuclease polynucleotide phosphorylase
Eur. J. Biochem.
261
468-474
1999
Escherichia coli
Mohanty, B.K.; Kushner, S.R.
Polynucleotide phosphorylase functions both as a 3' -> 5' exonuclease and a poly(A) polymerase in Escherichia coli
Proc. Natl. Acad. Sci. USA
97
11966-11971
2000
Escherichia coli
Spickler, C.; Mackie, G.A.
Action of RNase II and polynucleotide phosphorylase against RNAs containing stem-loops of defined structure
J. Bacteriol.
182
2422-2427
2000
Escherichia coli
Zangrossi, S.; Briani, F.; Ghisotti, D.; Regonesi, M.E.; Tortora, P.; Deho, G.
Transcriptional and post-transcriptional control of polynucleotide phosphorylase during cold acclimation in Escherichia coli
Mol. Microbiol.
36
1470-1480
2000
Escherichia coli
Baginsky, S.; Shteiman-Kotler, A.; Liveanu, V.; Yehudai-Resheff, S.; Bellaoui, M.; Settlage, R.E.; Shabanowitz, J.; Hunt, D.F.; Schuster, G.; Gruissem, W.
Chloroplast PNPase exists as a homo-multimer enzyme complex that is distinct from the Escherichia coli degradosome
RNA
7
1464-1475
2001
Escherichia coli, Spinacia oleracea
Hayakawa, H.; Kuwano, M.; Sekiguchi, M.
Specific binding of 8-oxoguanine-containing RNA to polynucleotide phosphorylase protein
Biochemistry
40
9977-9982
2001
Escherichia coli
Yehudai-Resheff, S.; Hirsh, M.; Schuster, G.
Polynucleotide phosphorylase functions as both an exonuclease and a poly(A) polymerase in spinach chloroplasts
Mol. Cell. Biol.
21
5408-5416
2001
Escherichia coli, Spinacia oleracea
Bermudez-Cruz, R.M.; Garcia-Mena, J.; Montanez, C.
Polynucleotide phosphorylase binds to ssRNA with same affinity as to ssDNA
Biochimie
84
321-328
2002
Escherichia coli
Mohanty, B.K.; Kushner, S.R.
Polyadenylation of Escherichia coli transcripts plays an integral role in regulating intracellular levels of polynucleotide phosphorylase and RNase E
Mol. Microbiol.
45
1315-1324
2002
Escherichia coli
Duran-Figueroa, N.V.; Pina-Escobedo, A.; Schroeder, I.; Simons, R.W.; Garcia-Mena, J.
Polynucleotide phosphorylase interacts with ribonuclease E through a betabetaalphabetabetaalpha domain
Biochimie
88
725-735
2006
Escherichia coli (P05055), Escherichia coli
Briani, F.; Del Favero, M.; Capizzuto, R.; Consonni, C.; Zangrossi, S.; Greco, C.; De Gioia, L.; Tortora, P.; Deho, G.
Genetic analysis of polynucleotide phosphorylase structure and functions
Biochimie
89
145-157
2007
Escherichia coli, Escherichia coli (P05055)
Marchi, P.; Longhi, V.; Zangrossi, S.; Gaetani, E.; Briani, F.; Deho, G.
Autogenous regulation of Escherichia coli polynucleotide phosphorylase during cold acclimation by transcription termination and antitermination
Mol. Genet. Genomics
278
75-84
2007
Escherichia coli
Amblar, M.; Barbas, A.; Gomez-Puertas, P.; Arraiano, C.M.
The role of the S1 domain in exoribonucleolytic activity: substrate specificity and multimerization
RNA
13
317-327
2007
Escherichia coli (P05055), Escherichia coli
Shi, Z.; Yang, W.Z.; Lin-Chao, S.; Chak, K.F.; Yuan, H.S.
Crystal structure of Escherichia coli PNPase: Central channel residues are involved in processive RNA degradation
RNA
14
2361-2371
2008
Escherichia coli (P05055), Escherichia coli
Matus-Ortega, M.E.; Regonesi, M.E.; Pina-Escobedo, A.; Tortora, P.; Deho, G.; Garcia-Mena, J.
The KH and S1 domains of Escherichia coli polynucleotide phosphorylase are necessary for autoregulation and growth at low temperature
Biochim. Biophys. Acta
1769
194-203
2007
Escherichia coli (P05055), Escherichia coli
Awano, N.; Inouye, M.; Phadtare, S.
RNase activity of polynucleotide phosphorylase is critical at low temperature in Escherichia coli and is complemented by RNase II
J. Bacteriol.
190
5924-5933
2008
Escherichia coli, Escherichia coli JM83
Chang, S.A.; Cozad, M.; Mackie, G.A.; Jones, G.H.
Kinetics of polynucleotide phosphorylase: comparison of enzymes from Streptomyces and Escherichia coli and effects of nucleoside diphosphates
J. Bacteriol.
190
98-106
2008
Escherichia coli, Streptomyces coelicolor
Carzaniga, T.; Briani, F.; Zangrossi, S.; Merlino, G.; Marchi, P.; Deho, G.
Autogenous regulation of Escherichia coli polynucleotide phosphorylase expression revisited
J. Bacteriol.
191
1738-1748
2009
Escherichia coli (P05055), Escherichia coli
Del Favero, M.; Mazzantini, E.; Briani, F.; Zangrossi, S.; Tortora, P.; Deho, G.
Regulation of Escherichia coli polynucleotide phosphorylase by ATP
J. Biol. Chem.
283
27355-27359
2008
Escherichia coli
Nurmohamed, S.; Vaidialingam, B.; Callaghan, A.J.; Luisi, B.F.
Crystal structure of Escherichia coli polynucleotide phosphorylase core bound to RNase E, RNA and manganese: Implications for catalytic mechanism and RNA degradosome assembly
J. Mol. Biol.
389
17-33
2009
Escherichia coli (A7ZS61), Escherichia coli
Andrade, J.M.; Arraiano, C.M.
PNPase is a key player in the regulation of small RNAs that control the expression of outer membrane proteins
RNA
14
543-551
2008
Escherichia coli, Escherichia coli MG1693
Carzaniga, T.; Antoniani, D.; Deho, G.; Briani, F.; Landini, P.
The RNA processing enzyme polynucleotide phosphorylase negatively controls biofilm formation by repressing poly-N-acetylglucosamine (PNAG) production in Escherichia coli C
BMC Microbiol.
12
270
2012
Escherichia coli, Escherichia coli MG1655
Becket, E.; Tse, L.; Yung, M.; Cosico, A.; Miller, J.H.
Polynucleotide phosphorylase plays an important role in the generation of spontaneous mutations in Escherichia coli
J. Bacteriol.
194
5613-5620
2012
Escherichia coli
Wong, A.G.; McBurney, K.L.; Thompson, K.J.; Stickney, L.M.; Mackie, G.A.
The S1 and KH domains of polynucleotide phosphorylase determine the efficiency of RNA binding and autoregulation
J. Bacteriol.
195
2021-2031
2013
Escherichia coli
Nurmohamed, S.; Vincent, H.A.; Titman, C.M.; Chandran, V.; Pears, M.R.; Du, D.; Griffin, J.L.; Callaghan, A.J.; Luisi, B.F.
Polynucleotide phosphorylase activity may be modulated by metabolites in Escherichia coli
J. Biol. Chem.
286
14315-14323
2011
Escherichia coli, Escherichia coli MG1655
De Lay, N.; Gottesman, S.
Role of polynucleotide phosphorylase in sRNA function in Escherichia coli
RNA
17
1172-1189
2011
Escherichia coli, Escherichia coli MG1193
Carzaniga, T.; Deho, G.; Briani, F.
RNase III-independent autogenous regulation of Escherichia coli polynucleotide phosphorylase via translational repression
J. Bacteriol.
197
1931-1938
2015
Escherichia coli
Bandyra, K.J.; Sinha, D.; Syrjanen, J.; Luisi, B.F.; De Lay, N.R.
The ribonuclease polynucleotide phosphorylase can interact with small regulatory RNAs in both protective and degradative modes
RNA
22
360-372
2016
Escherichia coli
Carzaniga, T.; Sbarufatti, G.; Briani, F.; Deho, G.
Polynucleotide phosphorylase is implicated in homologous recombination and DNA repair in Escherichia coli
BMC Microbiol.
17
81
2017
Escherichia coli
Cameron, T.A.; De Lay, N.R.
The phosphorolytic exoribonucleases polynucleotide phosphorylase and RNase PH stabilize sRNAs and facilitate regulation of their mRNA targets
J. Bacteriol.
198
3309-3317
2016
Escherichia coli (P05055), Escherichia coli
