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Information on EC 2.7.3.9 - phosphoenolpyruvate-protein phosphotransferase and Organism(s) Escherichia coli and UniProt Accession P08839

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IUBMB Comments
Enzyme I of the phosphotransferase system (cf. EC 2.7.1.69 protein-Npi-phosphohistidine---sugar phosphotransferase). Acts only on histidine residues in specific phosphocarrier proteins of low molecular mass (9.5 kDa) involved in bacterial sugar transport. A similar reaction, where the protein is the enzyme EC 2.7.9.2 pyruvate, water dikinase, is part of the mechanism of that enzyme.
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Escherichia coli
UNIPROT: P08839
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Word Map
The taxonomic range for the selected organisms is: Escherichia coli
The expected taxonomic range for this enzyme is: Bacteria, Eukaryota, Archaea
Synonyms
enzyme i, phosphoenolpyruvate:sugar phosphotransferase system, phosphoenolpyruvate-dependent phosphotransferase system, phosphoenolpyruvate:carbohydrate phosphotransferase system, phosphoenolpyruvate:glycose phosphotransferase system, phosphoenolpyruvate-dependent phosphotransferase, phosphoenolpyruvate:sugar phosphotransferase, enzyme i of the phosphotransferase system, phosphoenolpyruvate-protein phosphotransferase, phosphotransferase enzyme i, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
enzyme I of the phosphotransferase system
-
PEP:sugar phosphotransferase system enzyme I
-
phosphoenolpyruvate-protein phosphotransferase
-
phosphoenolpyruvate:protein-L-histidine N-pros-phosphotransferase
-
phosphotransferase enzyme I
-
phosphotransferase system enzyme I
-
EIC
-
C-terminal domain of enzyme I
EIN
-
N-terminal domain of enzyme I
enzyme I
-
component of the phosphotransferase system
enzyme I of the phosphotransferase system
-
-
-
-
phosphoenolpyruvate sugar phosphotransferase enzyme I
-
-
-
-
phosphoenolpyruvate-dependent phosphotransferase
-
-
phosphoenolpyruvate:glycose phosphotransferase system
-
-
phosphoenolpyruvate:glycose phosphotransferase system enzyme I
-
-
phosphopyruvate-protein factor phosphotransferase
-
-
-
-
phosphopyruvate-protein phosphotransferase
-
-
-
-
phosphotransferase enzyme I
-
-
phosphotransferase system enzyme I
-
-
-
-
phosphotransferase, phosphoenolpyruvate-protein
-
-
-
-
sugar-PEP phosphotransferase enzyme I
-
-
-
-
additional information
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
phosphoenolpyruvate + protein histidine = pyruvate + protein Npi-phospho-L-histidine
show the reaction diagram
bi-bi ping-pong mechanism
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
phospho group transfer
phospho group transfer
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
phosphoenolpyruvate:protein-L-histidine Npi-phosphotransferase
Enzyme I of the phosphotransferase system (cf. EC 2.7.1.69 protein-Npi-phosphohistidine---sugar phosphotransferase). Acts only on histidine residues in specific phosphocarrier proteins of low molecular mass (9.5 kDa) involved in bacterial sugar transport. A similar reaction, where the protein is the enzyme EC 2.7.9.2 pyruvate, water dikinase, is part of the mechanism of that enzyme.
CAS REGISTRY NUMBER
COMMENTARY hide
37278-17-4
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
phosphoenolpyruvate + protein histidine
pyruvate + protein N-pros-phosphohistidine
show the reaction diagram
phosphoenolpyruvate + histidine-containing protein
pyruvate + phosphorylated histidine-containing protein
show the reaction diagram
phosphoenolpyruvate + HPr
pyruvate + phospho-HPr
show the reaction diagram
phosphoenolpyruvate + protein histidine
pyruvate + protein Npi-phospho-L-histidine
show the reaction diagram
pyruvate + phosphorylated histidine-containing protein
phosphoenolpyruvate + histidine-containing protein
show the reaction diagram
-
-
-
-
r
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
phosphoenolpyruvate + histidine-containing protein
pyruvate + phosphorylated histidine-containing protein
show the reaction diagram
-
the enzyme is essential for the catabolism of many sugars by bacterial cells
-
-
?
phosphoenolpyruvate + HPr
pyruvate + phospho-HPr
show the reaction diagram
-
the first two reactions in the phosphotransfer sequence of bacterial phosphoenolpyruvate:glycose phosphotransferase systems are the autophosphorylation of enzyme I by phosphoenolpyruvate followed by the transfer of the phospho group to the low-molecular weight protein, HPr
-
-
r
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Mn2+
-
can substitute for Mg2+
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
(4,5,6-triacetyloxy-9-oxoxanthen-3-yl)acetate
-
-
1,3,5-trihydroxy-2,4-bis(3-methylbut-2-enyl)xanthen-9-one
-
-
1,3,6,7-tetrahydroxy-2,8-bis(3-methylbut-2-enyl)xanthen-9-one
-
-
1,3,6-trihydroxy-7-methoxy-2,8-bis(3-methylbut-2-enyl)xanthen-9-one
-
-
1,3-bis(2-oxopropoxy)-9H-xanthen-9-one
-
-
1,6-dihydroxy-3,7-dimethoxy-2,8-bis(3-methylbut-2-enyl)xanthen-9-one
-
-
2,7-bis(2-aminoethoxy)xanthen-9-one
-
-
2,8-dihydroxy-1,6-dimethoxyxanthen-9-one
-
-
2-Hydroxy-3-butenoic acid
-
inactivation
2-[3-(prop-2-enylamino)propoxy]xanthen-9-one
-
-
5,7-diacetyl-6-(5-carboxy-6,7-dihydroxy-4-oxochromen-3-yl)-2,3-dihydroxy-9-oxoxanthene-1-carboxylic acid
-
-
6-chloro-2-(methylaminomethyl)xanthen-9-one
-
-
methyl 2-((3-[(1-methoxy-1-oxopropan-2-yl)oxy]-9-oxo-9H-xanthen-1-yl)oxy)propanoate
-
-
methyl 4-([(1-hydroxy-9-oxo-9H-xanthen-3-yl)oxy]methyl)benzoate
-
-
propan-2-yl,2-((9-oxo-3-[2-oxo-2-(propan-2-yloxy)ethoxy]-9H-xanthen-1-yl)oxy)acetate
-
-
pyruvate
-
physiological concentrations of pyruvate and Mg2+ decrease the amount of dimeric, active dephospho-enzyme I
additional information
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
phosphoenolpyruvate
-
physiological concentrations of phosphoenolpyruvate and Mg2+ increase the amount of dimeric, active dephospho-enzyme I
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.2
phosphoenolpyruvate
between 0.2 and 0.4
0.0105
histidine-containing protein
-
23°C, pH6.5
-
0.18
phosphoenolpyruvate
-
23°C, pH6.5
Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.28
oxalate
inhibits the phosphorylated enzyme
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5.8 - 8.5
-
less than 50% of maximal activity above and below
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
23
-
assay at
37
-
assay at
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
evolution
-
the phosphoenolpyruvate phosphotransferase system (PTS) is ubiquitous in eubacteria and absent from eukaryotes
malfunction
-
deficiency of enzyme I, EI, of the phosphoenolpyruvate phosphotransferase system in bacterial mutants lead to severe growth defects
metabolism
physiological function
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
73100
multiangle light scattering analysis
130000
-
calculated from amino acid sequence
135000
-
gel filtration at room temperature, sedimentation velocity
63489
-
2 * 63489, sequence of cDNA
65000
-
2 * 65000, SDS-PAGE, gel filtration at 4-6°C
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
dimer
homodimer
2 * 38500, multiangle light scattering analysis
dimer
monomer or dimer
-
x * 63500, enzyme I, EI, the monomer undergoes a monomer/dimer transition and only the dimer form accepts the phosphoryl group from phosphoenolpyruvate. The crystal structure of EI, PDB ID 1ZYM, reveals a dimeric protein in which each subunit comprises three domains: a domain that binds the partner HPr, a domain that carries the phosphorylated histidine residue, and a PEP-binding domain
additional information
-
enzyme I of the PEP:sugar phosphotransferase system is regulated by a monomer-dimer equilibrium. A Mg2+-dependent autophosphorylation by phosphoenolpyruvate requires the homodimer. Physiological concentrations of phosphoenolpyruvate and Mg2+ increase, whereas pyruvate and Mg2+ decrease the amount of dimeric, active dephospho-enzyme I
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
phosphoprotein
autophosphorylation
phosphoprotein
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
by vapour diffusion in hanging drops in presence of Mg2+, phosphoenolpyruvate and oxalate
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
G356S
the mutant shows reduced dimerization affinity and lower autophosphorylation activity compared to the wild type enzyme
H189A
active site mutant
H189Q
site directed mutagenesis
G338D
-
significant loss of activity, no phosphorylation
G338E
-
significant loss of activity, no phosphorylation
G338H
-
significant loss of activity, diminishes phosphorylation
G338N
-
significant loss of activity
G338R
-
significant loss of activity, diminishes phosphorylation
G338V
-
significant loss of activity,decrease in phosphorylation
H15D
-
10-fold increase of Km, 1000-fold decrease of Vmax
H189A
H189E
additional information
pH STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
6.5 - 7.5
dimerization of the enzyme depends on pH
674582
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
15 - 35
dimerization of the enzyme depends on the temperature
additional information
-
thermodynamic properties of N-terminal domain
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
-20°C, 25 mM sodium phosphate buffer, pH 7.2, 1 mM NaN3, dithiothreitol, stable for months, but instable in Tris buffer
-
-20°C, lyophilized, indefinitely stable
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
DEAE column or HisTrap column chromatography, Superdex 75 gel filtration and MonoQ column chromatography
from overproducing transformants
from overproducing transformants, also the N and C terminal domain of the enzyme
DEAE column chromatography and Superdex 200 gel filtration
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
in overproducing transformants
in overproducing transformants, also the N- and C- terminal domain of the enzyme were cloned and expressed separately
the C-terminal and N-terminal domains of enzyme I are expressed in Escherichia coli BL21star(DE3) cells
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
drug development
-
enzyme I, EI, of the phosphoenolpyruvate phosphotransferase system isa drug target to develop antimicrobial agents, xanthone derivatives have high potential to be developed as antibiotics
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Napper, S.; Brokx, S.J.; Pally, E.; Kindrachuk, J.; Delbaere, L.T.J.; Waygood, E.B.
Substitution of aspartate and glutamate for active center histidines in the Escherichia coli phosphoenolpyruvate:sugar phosphotransferase system maintain phosphotransfer potential
J. Biol. Chem.
276
41588-41593
2001
Escherichia coli
Manually annotated by BRENDA team
Chauvin, F.; Brand, L.; Roseman, S.
Sugar transport by the bacterial phosphotransferase system. Characterization of the Escherichia coli enzyme I monomer/dimer transition kinetics by fluorescence anisotropy
J. Biol. Chem.
269
20270-20274
1994
Escherichia coli
Manually annotated by BRENDA team
Chauvin, F.; Brand, L.; Roseman, S.
Sugar transport by the bacterial phosphotransferase system. Characterization of the Escherichia coli enzyme I monomer/dimer equilibrium by fluorescence anisotropy
J. Biol. Chem.
269
20263-20269
1994
Escherichia coli
Manually annotated by BRENDA team
Waygood, E.B.
Enzyme I of the phosphoenolpyruvate: sugar phosphotransferase system has two sites of phosphorylation per dimer
Biochemistry
25
4085-4090
1986
Escherichia coli
Manually annotated by BRENDA team
Hoving, H.; Koning, J.H.; Robillard, G.T.
Escherichia coli phosphoenolpyruvate-dependent phosphotransferase system: role of divalent metals in the dimerization and phosphorylation of enzyme I
Biochemistry
21
3128-3136
1982
Escherichia coli
Manually annotated by BRENDA team
Waygood, E.B.; Steeves, T.
Enzyme I of the phosphoenolpyruvate: sugar phosphotransferase system of Escherichia coli. Purification to homogeneity and some properties
Can. J. Biochem.
58
40-48
1980
Escherichia coli
Manually annotated by BRENDA team
Misset, O.; Brouwer, M.; Robillard, G.T.
Escherichia coli phosphoenolpyruvate-dependent phosphotransferase system. Evidence that the dimer is the active form of enzyme I
Biochemistry
19
883-890
1980
Escherichia coli
Manually annotated by BRENDA team
Robillard, G.T.; Dooijewaard, G.; Lolkema, J.
Escherichia coli phosphoenolpyruvate dependent phosphotransferase system. Complete purification of enzyme I by hydrophobic interaction chromatography
Biochemistry
18
2984-2989
1979
Escherichia coli
-
Manually annotated by BRENDA team
Postma, P.W.; Roseman, S.
The bacterial phosphoenolpyruvate: sugar phosphotransferase system
Biochim. Biophys. Acta
457
213-257
1976
Escherichia coli, Staphylococcus aureus, Salmonella enterica subsp. enterica serovar Typhimurium
Manually annotated by BRENDA team
Walsh, C.T.; Kabak, H.R.
Vinylglycolic acid. An inactivator of the phosphoenolpyruvate-phosphate transferase system in Escherichia coli
J. Biol. Chem.
248
5456-5462
1973
Escherichia coli
Manually annotated by BRENDA team
Saffen, D.W.; Presper, K.A.; Doering, T.L.; Roseman, S.
Sugar transport by the bacterial phosphotransferase system. Molecular cloning and structural analysis of the Escherichia coli ptsH, ptsI, and crr genes
J. Biol. Chem.
262
16241-16253
1987
Escherichia coli
Manually annotated by BRENDA team
De Reuse, H.; Danchin, A.
The ptsH, ptsI, and crr genes of the Escherichia coli phosphoenolpyruvate-dependent phosphotransferase system: a complex operon with several modes of transcription
J. Bacteriol.
170
3827-3837
1988
Escherichia coli
Manually annotated by BRENDA team
Chauvin, F.; Fomenkov, A.; Johnson, C.R.; Roseman, S.
The N-terminal domain of Escherichia coli enzyme I of the phosphoenolpyruvate/glycose phosphotransferase system: molecular cloning and characterization
Proc. Natl. Acad. Sci. USA
93
7028-7031
1996
Escherichia coli
Manually annotated by BRENDA team
Dimitrova, M.N.; Szczepanowski, R.H.; Ruvinov, S.B.; Peterkofsky, A.; Ginsburg, A.
Interdomain Interaction and Substrate Coupling Effects on Dimerization and Conformational Stability of Enzyme I of the Escherichia coli Phosphoenolpyruvate:Sugar Phosphotransferase System
Biochemistry
41
906-913
2002
Escherichia coli
Manually annotated by BRENDA team
Ginsburg, A.; Szczepanowski, R.H.; Ruvinov, S.B.; Nosworthy, N.J.; Sondej, M.; Umland, T.C.; Peterkofsky, A.
Conformational stability changes of the amino terminal domain of enzyme I of the Escherichia coli phosphoenolpyruvate: sugar phosphotransferase system produced by substituting alanine or glutamate for the active-site histidine 189: implications for phosphorylation effects
Protein Sci.
9
1085-1094
2000
Escherichia coli
Manually annotated by BRENDA team
Mao, Q.; Schunk, T.; Gerber, B.; Erni, B.
A string of enzymes, purification and characterization of a fusion protein comprising the four subunits of the glucose phosphotransferase system of Escherichia coli
J. Biol. Chem.
270
18295-18300
1995
Escherichia coli
Manually annotated by BRENDA team
Napper, S.; Delbaere, L.T.J.; Waygood, E.B.
The aspartyl replacement of the active site histidine in histidine-containing protein, HPr, of the Escherichia coli phosphoenolpyruvate:sugar phosphotransferase system can accept and donate a phosphoryl group. Spontaneous dephosphorylation of acyl-phosphate autocatalyzes an internal cyclization
J. Biol. Chem.
274
21776-21782
1999
Escherichia coli
Manually annotated by BRENDA team
Seok, Y.J.; Lee, B.R.; Gazdar, C.; Svenson, I.; Yadla, N.; Peterkofsky, A.
Importance of the region around glycine-338 for the activity of enzyme I of the Escherichia coli phosphoenolpyruvate:sugar phosphotransferase system
Biochemistry
35
236-242
1996
Escherichia coli
Manually annotated by BRENDA team
Meadow, N.D.; Mattoo, R.L.; Savtchenko, R.S.; Roseman, S.
Transient state kinetics of Enzyme I of the phosphoenolpyruvate:glycose phosphotransferase system of Escherichia coli: equilibrium and second-order rate constants for the phospho transfer reactions with phosphoenolpyruvate and HPr
Biochemistry
44
12790-12796
2005
Escherichia coli
Manually annotated by BRENDA team
Patel, H.V.; Vyas, K.A.; Li, X.; Savtchenko, R.; Roseman, S.
Subcellular distribution of enzyme I of the Escherichia coli phosphoenolpyruvate:glycose phosphotransferase system depends on growth conditions
Proc. Natl. Acad. Sci. USA
101
17486-17491
2004
Escherichia coli
Manually annotated by BRENDA team
Dimitrova, M.N.; Peterkofsky, A.; Ginsburg, A.
Opposing effects of phosphoenolpyruvate and pyruvate with Mg(2+) on the conformational stability and dimerization of phosphotransferase enzyme I from Escherichia coli
Protein Sci.
12
2047-2056
2003
Escherichia coli
Manually annotated by BRENDA team
Patel, H.V.; Vyas, K.A.; Savtchenko, R.; Roseman, S.
The monomer/dimer transition of enzyme I of the Escherichia coli phosphotransferase system
J. Biol. Chem.
281
17570-17578
2006
Escherichia coli (P08839), Escherichia coli
Manually annotated by BRENDA team
Patel, H.V.; Vyas, K.A.; Mattoo, R.L.; Southworth, M.; Perler, F.B.; Comb, D.; Roseman, S.
Properties of the C-terminal domain of enzyme I of the Escherichia coli phosphotransferase system
J. Biol. Chem.
281
17579-17587
2006
Escherichia coli (P08839), Escherichia coli
Manually annotated by BRENDA team
Teplyakov, A.; Lim, K.; Zhu, P.P.; Kapadia, G.; Chen, C.C.; Schwartz, J.; Howard, A.; Reddy, P.T.; Peterkofsky, A.; Herzberg, O.
Structure of phosphorylated enzyme I, the phosphoenolpyruvate:sugar phosphotransferase system sugar translocation signal protein
Proc. Natl. Acad. Sci. USA
103
16218-16223
2006
Escherichia coli (P08839), Escherichia coli
Manually annotated by BRENDA team
Escalante, A.; Salinas Cervantes, A.; Gosset, G.; Bolívar, F.
Current knowledge of the Escherichia coli phosphoenolpyruvate-carbohydrate phosphotransferase system: peculiarities of regulation and impact on growth and product formation
Appl. Microbiol. Biotechnol.
94
1483-1494
2012
Escherichia coli
Manually annotated by BRENDA team
Gabor, E.; Goehler, A.K.; Kosfeld, A.; Staab, A.; Kremling, A.; Jahreis, K.
The phosphoenolpyruvate-dependent glucose-phosphotransferase system from Escherichia coli K-12 as the center of a network regulating carbohydrate flux in the cell
Eur. J. Cell Biol.
90
711-720
2011
Escherichia coli
Manually annotated by BRENDA team
Lazazzera, B.
The phosphoenolpyruvate phosphotransferase system: As important for biofilm formation by Vibrio cholerae as it is for metabolism in Escherichia coli
J. Bacteriol.
192
4083-4085
2010
Escherichia coli, Vibrio cholerae serotype O1
Manually annotated by BRENDA team
Pereira, C.; Santos, A.; Bejerano-Sagie, M.; Correia, P.; Marques, J.; Xavier, K.
Phosphoenolpyruvate phosphotransferase system regulates detection and processing of the quorum sensing signal autoinducer-2
Mol. Microbiol.
84
93-104
2012
Escherichia coli
Manually annotated by BRENDA team
Yun, Y.; Suh, J.
Calorimetric and spectroscopic investigation of the interaction between the C-terminal domain of enzyme I and its ligands
Protein Sci.
21
1726-1733
2012
Escherichia coli
Manually annotated by BRENDA team
Huang, K.J.; Lin, S.H.; Lin, M.R.; Ku, H.; Szkaradek, N.; Marona, H.; Hsu, A.; Shiuan, D.
Xanthone derivatives could be potential antibiotics: virtual screening for the inhibitors of enzyme I of bacterial phosphoenolpyruvate-dependent phosphotransferase system
J. Antibiot.
66
453-458
2013
Escherichia coli
Manually annotated by BRENDA team
Lee, K.; Yun, Y.; Kim, I.; Suh, J.
Dimerization facilitates the conformational transitions for bacterial phosphotransferase enzyme I autophosphorylation in an allosteric manner
FEBS Open Bio
7
1208-1216
2017
Escherichia coli (P08839)
Manually annotated by BRENDA team