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Information on EC 2.7.2.8 - acetylglutamate kinase and Organism(s) Arabidopsis thaliana and UniProt Accession Q9SCL7

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Arabidopsis thaliana
UNIPROT: Q9SCL7 not found.
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The taxonomic range for the selected organisms is: Arabidopsis thaliana
The expected taxonomic range for this enzyme is: Bacteria, Eukaryota, Archaea
Synonyms
n-acetyl-l-glutamate kinase, acetylglutamate kinase, n-acetylglutamate kinase, n-acetyl glutamate kinase, mmnags/k, ynagk, n-acetylglutamate 5-phosphotransferase, ccnagk, ecnagk, n-acetylglutamate-5-phosphotransferase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
acetylglutamate kinase
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N-acetyl-L-glutamate kinase
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N-acetylglutamate kinase
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acetylglutamate phosphokinase
-
-
-
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kinase, acetylglutamate (phosphorylating)
-
-
-
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N-acetyl-L-glutamate kinase
-
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N-acetylglutamate 5-phosphotransferase
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-
-
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N-acetylglutamate kinase
-
-
-
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N-acetylglutamate phosphokinase
-
-
-
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N-acetylglutamate-5-phosphotransferase
-
-
-
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N-acetylglutamic 5-phosphotransferase
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
phospho group transfer
phospho group transfer
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
ATP:N-acetyl-L-glutamate 5-phosphotransferase
-
CAS REGISTRY NUMBER
COMMENTARY hide
9027-58-1
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
ATP + N-acetyl-L-glutamate
ADP + N-acetyl-L-glutamate 5-phosphate
show the reaction diagram
ATP + N-acetyl-L-glutamate
ADP + N-acetyl-L-glutamyl 5-phosphate
show the reaction diagram
-
-
-
?
ATP + N-acetyl-L-glutamate
ADP + N-acetyl-L-glutamate 5-phosphate
show the reaction diagram
-
-
-
-
?
additional information
?
-
-
NAGK strongly interacts with PII protein only in the presence of Mg-ATP, this process is reversed by 2-oxoglutarate
-
-
?
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
ATP + N-acetyl-L-glutamate
ADP + N-acetyl-L-glutamate 5-phosphate
show the reaction diagram
-
-
-
?
ATP + N-acetyl-L-glutamate
ADP + N-acetyl-L-glutamyl 5-phosphate
show the reaction diagram
-
-
-
?
ATP + N-acetyl-L-glutamate
ADP + N-acetyl-L-glutamate 5-phosphate
show the reaction diagram
-
-
-
-
?
additional information
?
-
-
NAGK strongly interacts with PII protein only in the presence of Mg-ATP, this process is reversed by 2-oxoglutarate
-
-
?
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Mg2+
-
required
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2-oxoglutarate
complete inhibition at 0.5 mM
L-arginine
L-arginine
-
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2-Ketoglutarate
only if bound to the PII protein ATP complex
PII protein
-
additional information
2-ketoglutarate shows no additive effect to the activation of PII protein
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KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.3 - 2.47
ATP
0.85 - 85
N-acetyl-L-glutamate
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
115 - 187.5
N-acetyl-L-glutamate
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
1.3 - 220
N-acetyl-L-glutamate
IC50 VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
1 - 5.9
L-arginine
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
12
without PII protein
24
with PII protein
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
malfunction
enzyme mutations lower pollen tube competitiveness. Mutant pollen tubes grow more slowly than wild type pollen tubes. Mutant female gametophytes are defective in micropylar pollen tube guidance. Loss-of-function of enzyme results in Arabidopsis embryos not developing beyond the four-celled embryo stage
metabolism
the enzyme catalyzes the second step of arginine biosynthesis
physiological function
the enzyme is required for both gametophyte function and embryo development
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
NAGK_ARATH
347
0
36595
Swiss-Prot
Chloroplast (Reliability: 1)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
30000
recombinant protein, SDS-PAGE
33000
mass spectrometry
198000
-
calculated from amino acid sequence
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
as complex with PII protein, NAGK binds Mg2+, ADP, arginine and N-acetylglutamate
hanging drop vapor diffusion method at room temperature, crystal structure of a complex formed between two homotrimers of PII and a single hexamer of enzyme bound to the metabolites N-acetylglutamate, ADP, ATP, and arginine
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
affinity chromatography and gel filtration by binding to the PII protein, Ni-nitrilotriacetic acid agarose to purify the recombinant protein
of the recombinant protein
His-Select nickel affinity gel column chromatography
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CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in enzyme-deficient Escherichia coli mutant strain JW5553-1
expressed in Escherichia coli BL21(DE3) cells
expression in Escherichia coli
expressed in Escherichia coli
-
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Ferrario-Mery, S.; Besin, E.; Pichon, O.; Meyer, C.; Hodges, M.
The regulatory PII protein controls arginine biosynthesis in Arabidopsis
FEBS Lett.
580
2015-2020
2006
Arabidopsis thaliana (Q9SCL7)
Manually annotated by BRENDA team
Chen, Y.M.; Ferrar, T.S.; Lohmeir-Vogel, E.; Morrice, N.; Mizuno, Y.; Berenger, B.; Ng, K.K.; Muench, D.G.; Moorhead, G.B.
The PII signal transduction protein of Arabidopsis thaliana forms an arginine-regulated complex with plastid N-acetyl glutamate kinase
J. Biol. Chem.
281
5726-5733
2006
Arabidopsis thaliana (Q9SCL7), Arabidopsis thaliana
Manually annotated by BRENDA team
Mizuno, Y.; Moorhead, G.B.; Ng, K.K.
Structural basis for the regulation of N-acetylglutamate kinase by PII in Arabidopsis thaliana
J. Biol. Chem.
282
35733-35740
2007
Arabidopsis thaliana, Arabidopsis thaliana (Q9SCL7)
Manually annotated by BRENDA team
Feria Bourrellier, A.; Ferrario-Mry, S.; Vidal, J.; Hodges, M.
Metabolite regulation of the interaction between Arabidopsis thaliana PII and N-acetyl-l-glutamate kinase
Biochem. Biophys. Res. Commun.
387
700-704
2009
Arabidopsis thaliana
Manually annotated by BRENDA team
Min, L.; Jin, Z.; Caldovic, L.; Morizono, H.; Allewell, N.M.; Tuchman, M.; Shi, D.
Mechanism of allosteric inhibition of N-acetyl-L-glutamate synthase by L-arginine
J. Biol. Chem.
284
4873-4880
2009
Arabidopsis thaliana, Pseudomonas aeruginosa (Q9HTN2)
Manually annotated by BRENDA team
Beez, S.; Fokina, O.; Herrmann, C.; Forchhammer, K.
N-acetyl-L-glutamate kinase (NAGK) from oxygenic phototrophs: P(II) signal transduction across domains of life reveals novel insights in NAGK control
J. Mol. Biol.
389
748-758
2009
Synechococcus elongatus, Arabidopsis thaliana (Q9SCL7), Arabidopsis thaliana
Manually annotated by BRENDA team
Huang, J.; Chen, D.; Yan, H.; Xie, F.; Yu, Y.; Zhang, L.; Sun, M.; Peng, X.
Acetylglutamate kinase is required for both gametophyte function and embryo development in Arabidopsis thaliana
J. Integr. Plant Biol.
59
642-656
2017
Arabidopsis thaliana (Q9SCL7), Arabidopsis thaliana
Manually annotated by BRENDA team