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Information on EC 2.7.11.25 - mitogen-activated protein kinase kinase kinase and Organism(s) Arabidopsis thaliana and UniProt Accession Q39008

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EC Tree
IUBMB Comments
This enzyme phosphorylates and activates its downstream protein kinase, EC 2.7.12.2, mitogen-activated protein kinase kinase (MAPKK) but requires MAPKKKK for activation. Some members of this family can be activated by p21-activated kinases (PAK/STE20) or Ras. While c-Raf and c-Mos activate the classical MAPK/ERK pathway, MEKK1 and MEKK2 preferentially activate the c-Jun N-terminal protein kinase(JNK)/stress-activated protein kinase (SAPK) pathway . Mitogen-activated protein kinase (MAPK) signal transduction pathways are among the most widespread mechanisms of cellular regulation. Mammalian MAPK pathways can be recruited by a wide variety of stimuli including hormones (e.g. insulin and growth hormone), mitogens (e.g. epidermal growth factor and platelet-derived growth factor), vasoactive peptides (e.g. angiotensin-II and endothelin), inflammatory cytokines of the tumour necrosis factor (TNF) family and environmental stresses such as osmotic shock, ionizing radiation and ischaemic injury.
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This record set is specific for:
Arabidopsis thaliana
UNIPROT: Q39008
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Word Map
The taxonomic range for the selected organisms is: Arabidopsis thaliana
The enzyme appears in selected viruses and cellular organisms
Reaction Schemes
+
a [protein]-(L-serine/L-threonine)
=
+
a [protein]-(L-serine/L-threonine) phosphate
Synonyms
b-raf, c-raf, mekk1, c-mos, apoptosis signal-regulating kinase 1, mixed lineage kinase, ste11, mekk3, map3k1, mapkkk, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
MAP kinase kinase kinase 1
-
c-mos
-
-
-
-
DLK
-
-
-
-
Dual leucine zipper bearing kinase
-
-
-
-
HsNIK
-
-
-
-
Leucine-zipper protein kinase
-
-
-
-
MAP kinase kinase kinase
MAP kinase kinase kinase 2
-
MAP kinase kinase kinase 20
-
MAPK-upstream kinase
-
-
-
-
MAPKK kinase
-
-
mitogen activated protein kinase kinase kinase
-
-
mitogen-activated protein kinase kinase kinase
-
-
mitogen-activated protein kinase kinase kinase 20
MUK
-
-
-
-
NF-kappa beta-inducing kinase
-
-
-
-
Serine/threonine protein kinase NIK
-
-
-
-
summ1
gene name, includes MEKK2
suppressor of mkk1 mkk2 1
includes MEKK2
ZPK
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
ATP:protein phosphotransferase (MAPKKKK-activated)
This enzyme phosphorylates and activates its downstream protein kinase, EC 2.7.12.2, mitogen-activated protein kinase kinase (MAPKK) but requires MAPKKKK for activation. Some members of this family can be activated by p21-activated kinases (PAK/STE20) or Ras. While c-Raf and c-Mos activate the classical MAPK/ERK pathway, MEKK1 and MEKK2 preferentially activate the c-Jun N-terminal protein kinase(JNK)/stress-activated protein kinase (SAPK) pathway [2]. Mitogen-activated protein kinase (MAPK) signal transduction pathways are among the most widespread mechanisms of cellular regulation. Mammalian MAPK pathways can be recruited by a wide variety of stimuli including hormones (e.g. insulin and growth hormone), mitogens (e.g. epidermal growth factor and platelet-derived growth factor), vasoactive peptides (e.g. angiotensin-II and endothelin), inflammatory cytokines of the tumour necrosis factor (TNF) family and environmental stresses such as osmotic shock, ionizing radiation and ischaemic injury.
CAS REGISTRY NUMBER
COMMENTARY hide
146702-84-3
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
ATP + MKK1
ADP + phosphorylated MKK1
show the reaction diagram
-
-
-
?
ATP + MKK2
ADP + phosphorylated MKK2
show the reaction diagram
-
-
-
?
ATP + MPK4
ADP + phosphorylated MPK4
show the reaction diagram
MEKK1 is essential for MPK4 activation by flg22
-
-
?
ATP + myelin basic protein
ADP + phosphorylated myelin basic protein
show the reaction diagram
-
-
-
?
ATP + MKK3
ADP + phosphorylated MKK3
show the reaction diagram
ATP + MPK18
ADP + phosphorylated MPK18
show the reaction diagram
ATP + MPK4
ADP + phosphorylated MPK4
show the reaction diagram
-
-
-
-
?
ATP + MPK6
ADP + phosphorylated MPK6
show the reaction diagram
-
-
-
-
?
ATP + myelin basic protein
ADP + phosphorylated myelin basic protein
show the reaction diagram
ATP + PIN1HL
ADP + phosphorylated PIN1HL
show the reaction diagram
-
-
-
-
?
ATP + PIN7HL
ADP + phosphorylated PIN7HL
show the reaction diagram
-
-
-
-
?
ATP + WRKY53
ADP + phosphorylated WRKY53
show the reaction diagram
-
phosphorylation increases DNA-binding activity of WRKY53
-
-
?
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
ATP + MKK1
ADP + phosphorylated MKK1
show the reaction diagram
-
-
-
?
ATP + MKK2
ADP + phosphorylated MKK2
show the reaction diagram
-
-
-
?
ATP + MKK3
ADP + phosphorylated MKK3
show the reaction diagram
-
-
-
?
ATP + MPK18
ADP + phosphorylated MPK18
show the reaction diagram
-
-
-
?
ATP + MPK6
ADP + phosphorylated MPK6
show the reaction diagram
-
-
-
-
?
ATP + myelin basic protein
ADP + phosphorylated myelin basic protein
show the reaction diagram
-
-
-
?
additional information
?
-
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
additional information
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
H2O2
-
activates, MEKK1 kinase activity and protein stability is regulated by H2O2 in a proteasome-dependent manner
TEMPERATURE RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
preferential expression of MEKK1 in the vasculature
Manually annotated by BRENDA team
preferential expression of MEKK1 in the vasculature
Manually annotated by BRENDA team
predominant expression of MEKK1
Manually annotated by BRENDA team
-
gard cells of leaf and shoot epidermis
Manually annotated by BRENDA team
abscission zones
Manually annotated by BRENDA team
additional information
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
-
MEKK1/WRKY53 complexes are predominantly localized in the nucleus
Manually annotated by BRENDA team
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
malfunction
analysis of mekk1 sid2 and mkk1 mkk2 sid2 mutant plants reveals that the elevated salicylic acid levels contribute very little to the mutant phenotypes in mekk1 and mkk1 mkk2
metabolism
a MAPK cascade is a signaling module usually consisting of a MAP kinase kinase kinase (MAPKKK), a MAP kinase kinase, and a MAPK. Activation of MAPKKKs by upstream signals results in sequential phosphorylation of their downstream MAPKKs and MAPKs. In Arabidopsis thaliana, the MEKK1-MKK1/MKK2-MPK4 mitogen-activated protein (MAP) kinase cascade represses cell death and immune responses. MEKK1, MKK1/MKK2, and MPK4 negatively regulate cell death and immunity. The MEKK1-MKK1/MKK2-MPK4 kinase cascade negatively regulates MEKK2 and activation of MEKK2 triggers SUMM2-mediated immune responses
physiological function
MEKK1 is involved in negative regulation of cell death and immunity
malfunction
metabolism
a MAPK cascade is a signaling module usually consisting of a MAP kinase kinase kinase (MAPKKK), a MAP kinase kinase, and a MAPK. Activation of MAPKKKs by upstream signals results in sequential phosphorylation of their downstream MAPKKs and MAPKs. The MEKK1-MKK1/MKK2-MPK4 kinase cascade negatively regulates MEKK2 and activation of MEKK2 triggers SUMM2-mediated immune responses. Mutants summ1-1 mkk1 mkk2 and summ1-2 mkk1 mkk2 exhibit wild type-like morphology
physiological function
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
M3K1_ARATH
608
0
66024
Swiss-Prot
Mitochondrion (Reliability: 4)
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
phosphoprotein
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
K361M
P740L
mutation in MEKK2
additional information
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
glutathione-Sepharose column chromatography
-
HisTrap Ni column chromatography
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Escherichia coli BL21 cells
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expressed in Escherichia coli Rosetta-gami cells
expression of Myc-tagged MEKK1 under the 35 S cauliflower mosaic virus promoter in Arabidopsis protoplasts
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full-length cDNA inserted into pGBKT7 vector to generate a MEKK1-GBD fusion construct, introduced into yeast strain Y187 containing the LacZ gene under the control of the GAL1 promoter, full-length MEKK1 fragments subcloned into the pQE30 expression vector to create pQE-MEKK1 encoding the 6 x His-tagged protein and expressed in Escherichia coli, full-length MEKK1 cDNA fragment with a HA-tag cloned into the pGFPc155c vector encoding the C-terminal part of the GFP protein and transformed to Agrobacterium tumefaciens strain GV3101/pMP90 and injected to Arabidopsis leaves
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gene YDA, transcriptome analysis of seedlings with wild-type and altered YODA activity, overview
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MEKK1 and mutant K361M constructs introduced into Arabidopsis plants via Agrobacterium transformation
-
EXPRESSION
ORGANISM
UNIPROT
LITERATURE
Raf10 expression in seedlings is induced by ABA, salt, mannitol and cold treatment
Raf11 expression in seedlings is induced by ABA, salt, mannitol and cold treatment
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Bergmann, D.C.; Lukowitz, W.; Somerville, C.R.
Stomatal development and pattern controlled by a MAPKK kinase
Science
304
1494-1497
2004
Arabidopsis thaliana
Manually annotated by BRENDA team
Ichimura, K.; Casais, C.; Peck, S.C.; Shinozaki, K.; Shirasu, K.
MEKK1 is required for MPK4 activation and regulates tissue-specific and temperature-dependent cell death in Arabidopsis
J. Biol. Chem.
281
36969-36976
2006
Arabidopsis thaliana (Q39008)
Manually annotated by BRENDA team
Nakagami, H.; Soukupova, H.; Schikora, A.; Zarsky, V.; Hirt, H.
A Mitogen-activated protein kinase kinase kinase mediates reactive oxygen species homeostasis in Arabidopsis
J. Biol. Chem.
281
38697-38704
2006
Arabidopsis thaliana
Manually annotated by BRENDA team
Miao, Y.; Laun, T.M.; Smykowski, A.; Zentgraf, U.
Arabidopsis MEKK1 can take a short cut: it can directly interact with senescence-related WRKY53 transcription factor on the protein level and can bind to its promoter
Plant Mol. Biol.
65
63-76
2007
Arabidopsis thaliana
Manually annotated by BRENDA team
Suarez-Rodriguez, M.C.; Adams-Phillips, L.; Liu, Y.; Wang, H.; Su, S.H.; Jester, P.J.; Zhang, S.; Bent, A.F.; Krysan, P.J.
MEKK1 is required for flg22-induced MPK4 activation in Arabidopsis plants
Plant Physiol.
143
661-669
2007
Arabidopsis thaliana
Manually annotated by BRENDA team
Lee, S.J.; Lee, M.H.; Kim, J.I.; Kim, S.Y.
Arabidopsis putative MAP kinase kinase kinases Raf10 and Raf11 are positive regulators of seed dormancy and ABA response
Plant Cell Physiol.
56
84-97
2015
Arabidopsis thaliana (F4HVH9), Arabidopsis thaliana (F4K645), Arabidopsis thaliana Col-0 (F4HVH9), Arabidopsis thaliana Col-0 (F4K645)
Manually annotated by BRENDA team
Kong, Q.; Qu, N.; Gao, M.; Zhang, Z.; Ding, X.; Yang, F.; Li, Y.; Dong, O.X.; Chen, S.; Li, X.; Zhang, Y.
The MEKK1-MKK1/MKK2-MPK4 kinase cascade negatively regulates immunity mediated by a mitogen-activated protein kinase kinase kinase in Arabidopsis
Plant Cell
24
2225-2236
2012
Arabidopsis thaliana (O81472), Arabidopsis thaliana (Q39008), Arabidopsis thaliana, Arabidopsis thaliana Col-0 (O81472), Arabidopsis thaliana Col-0 (Q39008)
Manually annotated by BRENDA team
Mithoe, S.; Ludwig, C.; Pel, M.; Cucinotta, M.; Casartelli, A.; Mbengue, M.; Sklenar, J.; Derbyshire, P.; Robatzek, S.; Pieterse, C.; Aebersold, R.; Menke, F.
Attenuation of pattern recognition receptor signaling is mediated by a MAP kinase kinase kinase
EMBO Rep.
17
441-454
2016
Arabidopsis thaliana
Manually annotated by BRENDA team
Benhamman, R.; Bai, F.; Drory, S.; Loubert-Hudon, A.; Ellis, B.; Matton, D.
The Arabidopsis mitogen-activated protein kinase kinase kinase 20 (MKKK20) acts upstream of MKK3 and MPK18 in two separate signaling pathways involved in root microtubule functions
Front. Plant Sci.
8
1352
2017
Arabidopsis thaliana, Arabidopsis thaliana (Q9SND6)
Manually annotated by BRENDA team
Wang, B.; Liu, G.; Zhang, J.; Li, Y.; Yang, H.; Ren, D.
The RAF-like mitogen-activated protein kinase kinase kinases RAF22 and RAF28 are required for the regulation of embryogenesis in Arabidopsis
Plant J.
96
734-747
2018
Arabidopsis thaliana
Manually annotated by BRENDA team
Bai, F.; Matton, D.
The Arabidopsis mitogen-activated protein kinase kinase kinase 20(MKKK20) C-terminal domain interacts with MKK3 and harbors a typical DEF mammalian MAP kinase docking site
Plant Signal. Behav.
13
e1503498
2018
Arabidopsis thaliana (Q9SND6), Arabidopsis thaliana
Manually annotated by BRENDA team