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Information on EC 2.5.1.54 - 3-deoxy-7-phosphoheptulonate synthase and Organism(s) Escherichia coli and UniProt Accession P0AB91

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Word Map
The taxonomic range for the selected organisms is: Escherichia coli
The enzyme appears in selected viruses and cellular organisms
Synonyms
dahp synthase, dahps, dah7ps, 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase, ds-co, ds-mn, dah7p synthase, dahp synthase-phe, dah7p, 3-deoxy-d-arabinoheptulosonate 7-phosphate synthase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
-
3-deoxy-D-arabinoheptulosonate 7-phosphate synthase
-
DAHP synthase
-
2-dehydro-3-deoxy-D-arabino-heptonate-7-phosphate D-erythrose-4-phosphate-lyase (pyruvate-phosphorylating)
-
-
-
-
2-dehydro-3-deoxy-phosphoheptanoate aldolase
-
-
-
-
2-dehydro-3-deoxy-phosphoheptonate aldolase
-
-
-
-
2-keto-3-deoxy-D-arabino-heptonic acid 7-phosphate synthetase
-
-
-
-
3-deoxy-D-arabino heptulosonate 7-phosphate synthase
-
-
3-deoxy-D-arabino-2-heptulosonic acid 7-phosphate synthetase
-
-
-
-
3-deoxy-D-arabino-heptolosonate-7-phosphate synthetase
-
-
-
-
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
-
-
3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase
-
-
-
-
3-deoxy-D-arabino-heptulosonate-7-phosphate synthase
-
-
-
-
3-deoxy-D-arabino-heptulosonic acid 7-phosphate synthase
-
-
3-deoxy-D-arabinoheptulosonate-7-phosphate synthetase
-
7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate D-erythrose-4-phosphate-lyase (pyruvate-phosphorylating)
-
-
-
-
7-phospho-2-keto-3-deoxy-D-arabino-heptonate D-erythrose-4-phosphate lyase (pyruvate-phosphorylating)
-
-
-
-
aldolase, phospho-2-keto-3-deoxyheptanoate
-
-
-
-
D-erythrose-4-phosphate-lyase
-
-
-
-
D-erythrose-4-phosphate-lyase (pyruvate-phosphorylating)
-
-
-
-
DAH7-P synthase
-
-
-
-
DAH7-P synthase (phe)
DAH7P synthase
-
-
DAHP synthase
DAHP synthase-phe
-
-
-
-
DAHP synthase-trp
-
-
-
-
DAHP synthase-tyr
-
-
-
-
DAHP(Phe)
-
-
-
-
deoxy-D-arabino-heptulosonate-7-phosphate synthetase
-
-
-
-
KDPH synthase
-
-
-
-
KDPH synthetase
-
-
-
-
phospho-2-dehydro-3-deoxyheptonate aldolase
-
-
-
-
phospho-2-keto-3-deoxyheptanoate aldolase
-
-
-
-
Phospho-2-keto-3-deoxyheptonate aldolase
-
-
-
-
phospho-2-keto-3-deoxyheptonic aldolase
-
-
-
-
phospho-2-oxo-3-deoxyheptonate aldolase
-
-
-
-
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
phosphoenolpyruvate + D-erythrose 4-phosphate + H2O = 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate + phosphate
show the reaction diagram
phosphoenolpyruvate + D-erythrose 4-phosphate + H2O = 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate + phosphate
show the reaction diagram
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
condensation
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
phosphoenolpyruvate:D-erythrose-4-phosphate C-(1-carboxyvinyl)transferase (phosphate-hydrolysing, 2-carboxy-2-oxoethyl-forming)
-
CAS REGISTRY NUMBER
COMMENTARY hide
9026-94-2
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
phosphoenolpyruvate + D-erythrose 4-phosphate + H2O
2-dehydro-3-deoxy-D-arabino-heptonate 7-phosphate + phosphate
show the reaction diagram
phosphoenolpyruvate + D-erythrose 4-phosphate + H2O
3-deoxy-D-arabino-hept-2-ulosonate 7-phospate + phosphate
show the reaction diagram
-
-
-
?
phosphoenol-3-fluoropyruvate + D-erythrose 4-phosphate + H2O
3-deoxy-D-erythro-hept-2-ulosonate 7-phosphate + phosphate
show the reaction diagram
-
enzyme does not discriminate between (E) and (Z)-form of phosphoenol-3-fluoropyruvate
-
-
?
phosphoenolpyruvate + (3S)-2-deoxyerythrose 4-phosphate + H2O
(5S)-[5H]-3,5-dideoxy-D-arabinoheptulosonate 7-phosphate + phosphate
show the reaction diagram
-
-
-
-
ir
phosphoenolpyruvate + 2-deoxy-D-ribose 5-phosphate
3,5-dideoxy-D-gluco-octulosonate 8-phosphate + 3,5-dideoxy-D-manno-octulosonate 8-phosphate + phosphate
show the reaction diagram
-
-
-
?
phosphoenolpyruvate + D-arabinose 5-phosphate
3-deoxy-D-manno-octulosonate 8-phosphate + phosphate
show the reaction diagram
-
-
-
?
phosphoenolpyruvate + D-erythrose 4-phosphate + H2O
2-dehydro-3-deoxy-D-arabino-heptonate 7-phosphate + phosphate
show the reaction diagram
phosphoenolpyruvate + D-erythrose 4-phosphate + H2O
3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate + phosphate
show the reaction diagram
phosphoenolpyruvate + D-ribose 5-phosphate
3-deoxy-D-altro-octulosonate 8-phosphate + phosphate
show the reaction diagram
phosphoenolpyruvate + DL-glyceraldehyde 3-phosphate
pyruvate + phosphate
show the reaction diagram
-
-
-
?
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
phosphoenolpyruvate + D-erythrose 4-phosphate + H2O
2-dehydro-3-deoxy-D-arabino-heptonate 7-phosphate + phosphate
show the reaction diagram
first enzyme in the shikimic pathway leading to biosynthesis of aromatic amino acids
-
?
phosphoenolpyruvate + D-erythrose 4-phosphate + H2O
3-deoxy-D-arabino-hept-2-ulosonate 7-phospate + phosphate
show the reaction diagram
-
-
-
?
phosphoenolpyruvate + D-erythrose 4-phosphate + H2O
2-dehydro-3-deoxy-D-arabino-heptonate 7-phosphate + phosphate
show the reaction diagram
phosphoenolpyruvate + D-erythrose 4-phosphate + H2O
3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate + phosphate
show the reaction diagram
-
-
-
-
?
additional information
?
-
-
structure comparison between 3-deoxy-7-phosphoheptulonate synthase and 3-deoxy-D-manno-octulosonate 8-phosphate synthase, EC 4.1.2.16, reveal that they share a common ancestor and adopt the same catalytic strategy
-
-
?
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Fe2+
a mononuclear iron enzyme, the enzyme required divalent metal cations, Fe2+ activates best, iron is the prosthetic metal in vivo
Mn2+
can substitute for Fe2+, activates DAHP synthase to about 70% of the iron-activated sample
Zn2+
cannot well substitute for Fe2+, activates DAHP synthase to about 20% of the iron-activated sample
Cd2+
-
activates, Tyr-sensitive isozyme
Mg2+
-
activates, Tyr-sensitive isozyme
additional information
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
D-erythrose 4-phosphate
Phe-sensitive isozyme: in absence of phosphoenolpyruvate the enzyme is inhibited via formation of a covalent binding to Lys186 via a slow Schiff base reaction, mechanism
H2O2
DAHP synthase enzymes are inactivated by H2O2 in vitro and in vivo, H2O2 displaces the iron atom from the enzyme, only the Fe2+-metalloform of the enzyme can be inactivated by hydrogen peroxide or superoxide
L-tyrosine
feedback inhibition
Phe
Phe-sensitive isozyme
superoxide
displaces the iron atom from the enzyme, only the Fe2+-metalloform of the enzyme can be inactivated by hydrogen peroxide or superoxide. Superoxide stress promotes the mismetallation of DAHP synthase
(2R)-2-(phosphonooxy)propanoic acid
-
mimicking phosphohemiketal 2 (instable), competitive to substrate phosphoenolpyruvate
(2S)-2-(phosphonooxy)propanoic acid
-
mimicking phosphohemiketal 2 (instable), competitive to substrate phosphoenolpyruvate
(2Z)-3-phosphono-2-(trifluoromethyl)prop-2-enoic acid
-
trifluorinated phosphonate
(E)-2-methyl-3-phosphonoacrylic acid
-
most potent of the tested inhibitors mimicking intermediates in the reaction, vinyl phosphonate 4
1,10-phenanthroline
-
activity is restored by Fe2+ or Zn2+
2,3-bisphosphoglycerate
-
-
2-(phosphonomethyl)prop-2-enoic acid
-
mimics substrate phosphoenolpyruvate, and should be inert due to alkene structure but lacking an electron-donor, acts as competitive inhibitor
2-phosphoglycerate
-
competitive with respect to phosphoenolpyruvate
3-deoxy-D-arabino-heptonic acid 7-phosphate
-
-
3-deoxy-D-arabinoheptulosonate-7-phosphate oxime
3-Methylphosphoenolpyruvate
-
-
3-Propylphosphoenolpyruvate
-
-
5,5'-dithiobis(2-nitrobenzoate)
-
-
alpha-Methylphenylalanine
-
-
beta-2-Thienyl-D,L-Ala
-
-
beta-phenylserine
-
-
beta-Thienylalanine
-
-
CN-
-
Tyr-sensitive isozyme, strong inhibition, reactivation by divalent cations only to a small extent
D-fructose 1,6-diphosphate
-
-
D-sedoheptulose 1,7-diphosphate
-
-
D-sedoheptulose 7-phosphate
-
-
diethyl dicarbonate
-
Phe-sensitive isozyme, pH-dependent, phosphoenolpyruvate protects wild-type and mutants H64G, H207G, H304G
dihydroxyphenylalanine
-
-
fosmidomycin
-
uncompetitive inhibitor, maximum level of inhibition after 10 min incubation, extent of inhibition dependent on the type of the metal cofactor, competitive inhibitor with respect to phosphoenolpyruvate
m-Chlorophenylalanine
-
-
m-Fluorophenylalanine
-
-
m-hydroxyphenylalanine
-
-
N-bromosuccinimide
-
-
N-ethylmaleimide
-
-
o-chlorophenylalanine
-
-
o-Fluorophenylalanine
-
-
o-hydroxyphenylalanine
-
-
p-aminophenylalanine
-
-
p-chloromercuribenzoate
-
complete inhibition at 0.02 mM, reversible by cysteine
p-Fluorophenylalanine
-
-
phenylalanine
-
1 Mn, wild-type 8.2% residual activity
phosphate
-
non-competitive with respect to both phosphoenolpyruvate and D-erythrose 4-phosphate
tetraammonium (((carboxymethyl)[(2S,3R,4S)-2,3,4-trihydroxy-5-(phosphonatooxy)pentyl]amino)methyl)phosphonate
-
IC50: 0.0066 mM
Tetranitromethane
-
-
Trinitrobenzene sulfonate
-
-
Trp
-
Trp-sensitive isozyme
[(1E)-7-bromo-2-carboxyhept-1-en-1-yl]phosphonate
-
inhibitor based on vinyl phosphonate, designed to fit into the binding sites of both phosphoenolpyruvate and D-erythrose 4-phosphate substrates simultaneously. Competitive with respect to phosphoenolpyruvate
[2-carboxy-7-(phosphonatooxy)hept-1-en-1-yl]phosphonate
-
inhibitor based on vinyl phosphonate ratio Z:E enantiomer 1:1. Inhibitor is designed to fit into the binding sites of both phosphoenolpyruvate and D-erythrose 4-phosphate substrates simultaneously. Competitive with respect to phosphoenolpyruvate
[2-carboxy-7-(phosphonatooxy)hept-2-en-1-yl]phosphonate
-
inhibitor based on allyl phosphonate, ratio Z:E enantiomer 7:3. Inhibitor is designed to fit into the binding sites of both phosphoenolpyruvate and D-erythrose 4-phosphate substrates simultaneously. Competitive with respect to phosphoenolpyruvate
additional information
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2-mercaptoethanol
-
activates
additional information
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2 - 21
phosphoenolpyruvate
0.65
(3S)-2-deoxyerythrose 4-phosphate
-
pH 6.8
6.8
2-deoxyribose 5-phosphate
-
recombinant enzyme, pH 7.5, 25°C
0.03
D-arabinose 5-phosphate
-
recombinant enzyme, pH 7.5, 25°C
0.015 - 52.36
D-erythrose 4-phosphate
0.005 - 12.25
phosphoenolpyruvate
6
ribose 5-phosphate
-
recombinant enzyme, pH 7.5, 25°C
additional information
additional information
-
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
71
D-erythrose 4-phosphate
Phe-sensitive isozyme, pH 6.8, 25°C
71
phosphoenolpyruvate
Phe-sensitive isozyme, pH 6.8, 25°C
0.233
(3S)-2-deoxyerythrose 4-phosphate
-
pH 6.8
1.183 - 122
D-erythrose 4-phosphate
4.2 - 122
phosphoenolpyruvate
Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.049
(2R)-2-(phosphonooxy)propanoic acid
-
buffer bis-tris-propane, 50 mM, pH 6.8, Mn2+, UV-visible spectroscopy at 232 nm, substrates phosphoenolpyruvate and D-erythrose 4-phosphate
0.67
(2S)-2-(phosphonooxy)propanoic acid
-
buffer bis-tris-propane, 50 mM, pH 6.8, Mn2+, UV-visible spectroscopy at 232 nm, substrates phosphoenolpyruvate and D-erythrose 4-phosphate
0.0088
(2Z)-3-phosphono-2-(trifluoromethyl)prop-2-enoic acid
-
buffer bis-tris-propane, 50 mM, pH 6.8, Mn2+, UV-visible spectroscopy at 232 nm, substrates phosphoenolpyruvate and D-erythrose 4-phosphate
0.0047
(E)-2-methyl-3-phosphonoacrylic acid
-
buffer bis-tris-propane, 50 mM, pH 6.8, Mn2+, UV-visible spectroscopy at 232 nm, substrates phosphoenolpyruvate and D-erythrose 4-phosphate
0.27
2-(phosphonomethyl)prop-2-enoic acid
-
buffer bis-tris-propane, 50 mM, pH 6.8, Mn2+, UV-visible spectroscopy at 232 nm, substrates phosphoenolpyruvate and D-erythrose 4-phosphate
0.0015
3-deoxy-D-arabinoheptulosonate-7-phosphate oxime
pH 7., 25°C
0.035
fosmidomycin
-
buffer bis-tris-propane, 50 mM, pH 6.8, Mn2+, UV-visible spectroscopy at 232 nm, substrates phosphoenolpyruvate and D-erythrose 4-phosphate
0.02
Tyr
-
pH 7.0, 24°C
additional information
additional information
-
-
-
IC50 VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0066
tetraammonium (((carboxymethyl)[(2S,3R,4S)-2,3,4-trihydroxy-5-(phosphonatooxy)pentyl]amino)methyl)phosphonate
Escherichia coli
-
IC50: 0.0066 mM
0.0036
[(1E)-7-bromo-2-carboxyhept-1-en-1-yl]phosphonate
Escherichia coli
-
pH not specified in the publication, temperature not specified in the publication
0.0053
[2-carboxy-7-(phosphonatooxy)hept-1-en-1-yl]phosphonate
Escherichia coli
-
pH not specified in the publication, temperature not specified in the publication
0.154
[2-carboxy-7-(phosphonatooxy)hept-2-en-1-yl]phosphonate
Escherichia coli
-
pH not specified in the publication, temperature not specified in the publication
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
0.29
-
N-terminal deletion mutant, 37°C, pH 6.4
0.4
-
partially purified enzyme
0.81
-
mutant W215A, 37°C, pH 6.4
0.92
-
mutant I10A, 37°C, pH 6.4
1.97
-
mutant N5K, 37°C, pH 6.4
2.1
-
purified enzyme
2.37
-
mutant V221A, 37°C, pH 6.4
2.7
-
wild-type, 37°C, pH 6.4
22
-
purified recombinant Tyr-sensitive isozyme, with Cd2+
3.07
-
mutant F144A, 37°C, pH 6.4
3.25
-
mutant F209A, 37°C, pH 6.4
3.6
-
mutant L175Q, 37°C, pH 6.4
30 - 40
-
purified Tyr-sensitive isozyme, wild-type and mutant N8K
4.25
-
mutant L175A, 37°C, pH 6.4
4.46
-
mutant L175D, 37°C, pH 6.4
56
-
purified enzyme
67
-
purified enzyme
82.6
-
purified enzyme
additional information
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
6.5 - 7
-
-
7 - 7.5
-
recombinant Tyr-sensitive isozyme
8
-
above, Phe-sensitive iaozyme mutant C61G
additional information
-
Tyr-sensitive isozyme, pIs: 6.1 and 8.9
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5.7 - 8.5
-
pH 5.7: about 25% of maximal activity, pH 8.5: about 30% of maximal activity
6 - 8.5
-
pH 6.0: about 65% of maximal activity, pH 8.5: about 50% of maximal activity
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
24
-
assay at
30
-
assay at
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
evolution
DAHP synthase belongs to a family of mononuclear iron-containing enzymes that are disabled by oxidative stress
metabolism
physiological function
expression of wild-type enzyme and phenylalanine-feedback insensitive mutant L175Q in Arabidopsis thaliana. Transgenic plants have comparable phenotypes and are fully fertile. The levels of shikimate, prephenate and Phe are higher in the different lines expressing the mutant enzyme than in the lines expressing the natural feedback-sensitive bacterial enzyme, and the control plants. Results imply that the bacterial enzyme is active in the transgenic plants and, similar to its operation in bacteria, the feedback insensitivity trait of the mutant enzyme is fundamental for enhancement of the flow of primary carbon metabolites via the shikimate pathway into the production of aromatic amino acids also in the plant
metabolism
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
105000
-
strain JP401, gel filtration
110000
136000
-
equilibrium sedimentation
140000
-
gel filtration and sedimentation equilibrium analysis
33000
-
x * 33000, SDS-PAGE
35000
-
4 * 35000, Phe-sensitive isozyme, SDS-PAGE
39000
66000
-
gel filtration
69000
-
gel filtration
71000
-
Tyr-sensitive isozyme, mutant N8K, gel filtration
75000
-
Tyr-sensitive isozyme, wild-type, gel filtration
77000
sedimentation velocity data, apo protein
78000
sedimentation velocity data, in complex with tyrosine
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
?
x * 38009-38014, Phe-sensitive isozyme, electron mass spectroscopy and amino acid sequence determination
dimer
mutant E24Q, crystallization data
tetramer
wild-type, crystallization data
dimer
tetramer
-
4 * 35000, Phe-sensitive isozyme, SDS-PAGE
additional information
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
native and selenomethionine-substituted protein, in complex with phosphoenolpyruvate and Mn2+, mutant E24Q in complex with phosphoenolpyruvate and Mn2+
Phe-sensitive isozyme, enzyme-Mn2+-2-phosphoglycolate-complexes, hanging drop vapour diffusion method, room temperature, all solutions, except the MnSO4 and the enzyme solution, are treated with Chelex-100 to remove metals, 0.2 mM enzyme subunit solution: 0.37 MnSO4, 4.2 mM 2-phosphoglycolate, 0.1 M Li2SO4, 12% PEG 100 w/v, 20% ethanol v/v, 50 mM 1,3-bis[tris(hydroxy-methyl)methylamino]propane buffer, pH 8.7, reservoir solution: 19% PEG 1000, 0.1 M Li2SO4, 20% ethanol v/v, 50 mM 1,3-bis[tris(hydroxy-methyl)methylamino]propane buffer, X-ray diffraction structure determination and analysis
in complex with inhibitor 3-deoxy-D-arabinoheptulosonate-7-phosphate oxime
Phe-sensitive isozyme, hanging drop vapour diffusion method, 22°C, with or without inhibitor phenylalanine, at pH 6.3-9.4, 0.1-0.2 M monovalent cations, PEG 1000-4000, 0.01 ml protein solution + 0.3 ml precipitant solution, X-ray diffraction structure determination and analysis
-
structures of apo form and complex with the inhibitor tyrosine at 2.5 and 2.0 A resolutions, respectively. DAHPS(Tyr) has a typical (beta/alpha)8 TIM barrel, which is decorated with an N-terminal extension and an antiparallel beta sheet. Inhibitor tyrosine binds at a cavity formed by residues of helices alpha3, alpha4, strands beta6a, beta6b and the adjacent loops, and directly interacts with residues P148, Q152, S181, I213 and N8*. Conformational changes of residues P148, Q152 and I213 initiate a transmission pathway to propagate the allosteric signal from the tyrosine-binding site to the active site
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
E24Q
unlike tetrameric enzyme, mutant is dimeric in solution
L175Q
phenylalanine-feedback-insensitive mutant
C328V
-
oligo-nucleotide mutagenesis, expression in Escherichia coli strains, 20% reduction in the catalytic constant, 2-3fold increase in Km for the substrates, completely resistant to both spontaneous and Cu2+-catalysed inactivation
C61A
DAHP oxime binding is noncompetitive with respect to Mn2+
C61G
-
site-directed mutagenesis, highly reduced activity, highly increased Km for phosphoenolpyruvate, higher pH-optimum than the wild-type
C61V
-
oligo-nucleotide mutagenesis, expression in Escherichia coli strains, inactive, does not bind metal ions, resistant to metal attack, no subunit dissociation upon Cu2+ treatment
D326A
DAHP oxime binding is noncompetitive with respect to Mn2+
DELTA1-15
-
N-terminal deletion of amino acids 1-15, no formation of dimeric form
F144A
-
inhibition by phenylalanine, 30% residual activity
F209A
-
inhibition by phenylalanine, 79% residual activity
H172G
-
site-directed mutagenesis, inactive
H207G
-
site-directed mutagenesis, reduced activity, increased Km values for the substrates, reduced kcat
H268A
DAHP oxime binding is competitive with respect to Mn2+
H268G
-
site-directed mutagenesis, inactive
H304G
-
site-directed mutagenesis, reduced activity, increased Km values for the substrates, increased kcat
H64G
-
site-directed mutagenesis, reduced activity, increased Km values for the substrates, increased kcat
H64L
-
oligo-nucleotide mutagenesis, expression in Escherichia coli strains, unstable to treatment with phosphoenolpyruvate, half-life of about 24 h at 0.4 mM compared to 6 days for the wild-type
I213P
overexpression of variant leads to less decrease in the accumulation of phenylalanine than overexpression of wild-type
L175A
-
inhibition by phenylalanine, 18% residual activity
L175D
-
inhibition by phenylalanine, 83% residual activity
L175Q
-
inhibition by phenylalanine, 44% residual activity
L179A
-
inhibition by phenylalanine, 82% residual activity
N8A
overexpression of variant leads to less decrease in the accumulation of phenylalanine than overexpression of wild-type
N8K
-
similar activity and substrate affinities like the wild-type, but insensitive against inhibition by tyrosine, decreased thermostability
P148A
overexpression of variant leads to less decrease in the accumulation of phenylalanine than overexpression of wild-type
P150L
-
inhibition by phenylalanine, no inhibition by phenylalanine
Q152A
overexpression of variant leads to higher accumulation of phenylalanine
S181A
overexpression of variant leads to higher accumulation of phenylalanine
V221A
-
inhibition by phenylalanine, 95% residual activity
W215A
-
inhibition by phenylalanine, 58% residual activity
additional information
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
22
-
half-life: 1.2 days in absence of phosphoenolpyruvate, half-life: 4 days in presence of 1 mM phosphoenolpyruvate
37
-
Tyr-sensitive isozyme, wild-type: 50% loss of activity in 80 min in presence of phosphoenolpyruvate, mutant N8K: 50% loss of activity in 20 min in presence of phosphoenolpyruvate
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
37°C, 65 min, 50% residual activity
-
Co2+ stabilizes
-
Cu2+ and Fe2+ accelerates subunit dissociation
-
metal-catalysed oxidation of the enzyme, the apoenzyme shows an exponentially decrease in activity with a half-life of about 1 day at 22°C, Cu2+ and Fe2+ accelerated the rate of inactivation and subunit dissociation, phosphoenolpyruvate and EDTA stabilize, mutants are insensitive
-
phosphoenolpyruvate stabilizes
-
spontaneous inactivation with a net loss of two of the seven thiol groups per subunit is restored by dithiothreitol
-
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
-15°C, ammonium sulfate and acetone fractions, stable for at least several weeks
-
-20°C, 0.1 M potassium phosphate, pH 6.5, 1 mM phosphoenolpyruvate, stable for at least 6 months
-
-20°C, in phosphate buffer containing phosphoenolpyruvate, stable for several months
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
recombinant His10-tagged enzyme from Escherichia coli strain BL21 by affinity chromatography, followed by tag cleavage with factor Xa and again affinity chromatography and dialysis to remove the tag
5-6fold to homogeneity
-
Phe-sensitive isozyme, recombinant wild-type from overexpressing strain and recombinant mutants
-
recombinant from overexpressing strain
-
strain JP1525
-
Tyr-sensitive isozyme, wild-type and mutants from strain AB3257
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
gene aroG, recombinant expression of a truncated coding DNA sequence of aroG in transgenic Solanum lycopersicum cv. 82 fruits under control of a fruit ripening-specific promoter, E8. Metabolic profiling of transgenic tomato plants expressing a bacterial feedback-insensitive AroG gene, overview
gene aroG, recombinant expression of His10-tagged enzyme in Escherichia coli strain BL21, subcloning in Escherichia coli strain DH5alpha
expressed in Escherichia coli strain NSTCSRA
-
gene aroF, Tyr-sensitive isozyme, expression of wild-type and mutants in strain AB3257
-
gene aroF, Tyr-sensitive isozyme, overexpression in strain BL21(DE3)
-
gene aroG, Phe-sensitive isozyme, overexpression in strain gene aroH, Trp-sensitive isozyme, overexpression in deficient strain AB3248
-
overexpression in BL21(DE3)
-
overexpression of 3 isozymes
-
Phe-sensitive isozyme, wild-type and mutants, expression in Escherichia coli strain BL21(DE3)
-
EXPRESSION
ORGANISM
UNIPROT
LITERATURE
enzyme damage by reactive oxidants, H2O2 and superoxide, induces the enzyme expression in Escherichia coli, which attempts to compensate for diminished DAHP synthase activity by increasing expression
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
agriculture
expression of wild-type enzyme and phenylalanine-feedback insensitive mutant L175Q in Arabidopsis thaliana. Transgenic plants have comparable phenotypes and are fully fertile. The levels of shikimate, prephenate and Phe are higher in the different lines expressing the mutant enzyme than in the lines expressing the natural feedback-sensitive bacterial enzyme, and the control plants. Results imply that the bacterial enzyme is active in the transgenic plants and, similar to its operation in bacteria, the feedback insensitivity trait of the mutant enzyme is fundamental for enhancement of the flow of primary carbon metabolites via the shikimate pathway into the production of aromatic amino acids also in the plant
biotechnology
fruit-specific manipulation of the conversion of primary to specialized metabolism, e.g. by expressing 3-deoxy-7-phosphoheptulonate synthase in tomato fruits, is an attractive approach for improving fruit aroma and flavour qualities as well as discovering novel fruit-specialized metabolites. Metabolic profiling of transgenic tomato plants expressing a bacterial feedback-insensitive AroG gene, overview
biotechnology
synthesis
synthesis of L-phenylalanine (an important amino acid that is widely used in the production of food flavors and pharmaceuticals) by engineered Escherichia coli. Coexpression of Vitreoscilla hemoglobin gene, driven by a tac promoter, with the genes encoding 3-deoxy-D-arabinoheptulosonate-7-phosphate synthetase (aroF) and feedback-resistant chorismate mutase/prephenate dehydratase (pheAfbr), leads to increased productivity of L-phenylalanine and decreased demand for aeration by Escherichia coli CICC10245
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Radaev, S.; Dastidar, P.; Patel, M.; Woodard, R.W.; Gatti, D.L.
Structure and mechanism of 3-deoxy-D-manno-octulosonate 8-phosphate synthase
J. Biol. Chem.
275
9476-9484
2000
Escherichia coli
Manually annotated by BRENDA team
Howe, D.L.; Sundaram, A.K.; Wu, J.; Gatti, D.L.; Woodard, R.W.
Mechanistic insight into 3-deoxy-D-manno-octulosonate-8-phosphate synthase and 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase utilizing phosphorylated monosaccharide analogues
Biochemistry
42
4843-4854
2003
Escherichia coli
Manually annotated by BRENDA team
Srinivasan, P.R.; Sprinson, D.B.
2-Keto-3-deoxy-D-arabo-heptonic acid 7-phosphate synthetase
J. Biol. Chem.
234
716-722
1954
Escherichia coli
Manually annotated by BRENDA team
Dusha, I.; Dnes, G.
Purification and properties of tyrosine-sensitive 3-deoxy-D-arabino-heptulosonate-7-phosphate synthetase of Escherichia coli K12
Biochim. Biophys. Acta
438
563-573
1976
Escherichia coli
Manually annotated by BRENDA team
Schoner, R.; Herrmann, K.M.
3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase. Purification, properties, and kinetics of the tyrosine-sensitive isoenzyme from Escherichia coli
J. Biol. Chem.
251
5440-5447
1976
Escherichia coli
Manually annotated by BRENDA team
Simpson, R.J.; Davidson, B.E.
Studies on 3-deoxy-D-arabinoheptulosonate-7-phosphate synthetase(phe) from Escherichia coli. Purification and subunit structure
Eur. J. Biochem.
70
493-500
1976
Escherichia coli
Manually annotated by BRENDA team
Simpson, R.J.; Davidson, B.E.
Studies on 3-deoxy-D-arabinoheptulosonate-7-phosphate synthetase(phe) from Escherichia coli K12. 2. Kinetic properties
Eur. J. Biochem.
70
501-507
1976
Escherichia coli
Manually annotated by BRENDA team
Simpson, R.J.; Davidson, B.E.
Studies on 3-deoxy-D-arabinoheptulosonate-7-phosphate synthetase(phe) from Escherichia coli K12. 3. Structural studies
Eur. J. Biochem.
70
509-516
1976
Escherichia coli
Manually annotated by BRENDA team
McCandliss, R.J.; Poling, M.D.; Herrmann, K.M.
3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase. Purification and molecular characterization of the phenylalanine-sensitive isoenzyme from Escherichia coli
J. Biol. Chem.
253
4259-4265
1978
Escherichia coli, Escherichia coli HE 401
Manually annotated by BRENDA team
Akowski, J.P.; Bauerle, R.
Steady state kinetics and inhibitor binding of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (tryptophan sensitive) from Escherichia coli
Biochemistry
36
15817-15822
1997
Escherichia coli
Manually annotated by BRENDA team
Ray, J.M.; Bauerle, R.
Purification and properties of tryptophan-sensitive 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from Escherichia coli
J. Bacteriol.
173
1894-1901
1991
Escherichia coli
Manually annotated by BRENDA team
Park, O.K.; Bauerle, R.
Metal-catalyzed oxidation of phenylalanine-sensitive 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from Escherichia coli: inactivation and destabilization by oxidation of active-site cysteine
J. Bacteriol.
181
1636-1642
1999
Escherichia coli
Manually annotated by BRENDA team
Sheflyan, G.Y.; Howe, D.L.; Wilson, T.L.; Woodard, R.W.
Enzymatic synthesis of 3-deoxy-D-manno-octulosonate 8-phosphate 3-deoxy-D-altro-octulosonate 8-phosphate, 3,5-dideoxy-D-gluco(manno)-octulosonate 8-phosphate by 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
J. Am. Chem. Soc.
120
11027-11032
1998
Escherichia coli
-
Manually annotated by BRENDA team
Stephens, C.M.; Bauerle, R.
Analysis of the metal requirement of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from Escherichia coli
J. Biol. Chem.
266
20810-20817
1991
Escherichia coli
Manually annotated by BRENDA team
Shumilin, I.A.; Kretsinger, R.H.; Bauerle, R.
Purification, crystallization, and preliminary crystallographic analysis of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from Escherichia coli
Proteins Struct. Funct. Genet.
24
404-406
1996
Escherichia coli
Manually annotated by BRENDA team
Ramilo, C.A.; Evans, J.N.S.
Overexpression, purification, and characterization of tyrosine-sensitive 3-deoxy-D-arabino-heptulosonic acid 7-phosphate synthase from Escherichia coli
Protein Expr. Purif.
9
253-261
1997
Escherichia coli
Manually annotated by BRENDA team
Flores, N.; Xiao, J.; Berry, A.; Bolivar, F.; Valle, F.
Pathway engineering for the production of aromatic compouds in Escherichia coli
Nat. Biotechnol.
14
620-623
1996
Escherichia coli
Manually annotated by BRENDA team
Wagner, T.; Shumilin, I.A.; Bauerle, R.; Kretsinger, R.H.
Structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from Escherichia coli: Comparison of the Mn2+*2-phosphoglycolate and the Pb2+*2-phosphoenolpyruvate complexes and Implications for catalysis
J. Mol. Biol.
301
389-399
2000
Escherichia coli (P0AB91), Escherichia coli
Manually annotated by BRENDA team
Howe, D.L.; Duewel, H.S.; Woodard, R.W.
Histidine 268 in 3-deoxy-D-arabino-heptulosonic acid 7-phosphate synthase plays the same role as histidine 202 in 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase
J. Biol. Chem.
275
40258-40265
2000
Escherichia coli
Manually annotated by BRENDA team
Jossek, R.; Bongaerts, J.; Sprenger, G.A.
Characterization of a new feedback-resistant 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase AroF of Escherichia coli
FEMS Microbiol. Lett.
202
145-148
2001
Escherichia coli, Escherichia coli W3110 / ATCC 27325
Manually annotated by BRENDA team
Parker, E.J.; Bulloch, E.M.M.; Jameson, G.B.; Abell, C.
Substrate deactivation of phenylalanine-sensitive 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase by erythrose 4-phosphate
Biochemistry
40
14821-14828
2001
Escherichia coli (P0AB91), Escherichia coli
Manually annotated by BRENDA team
Shumilin, I.A.; Bauerle, R.; Kretsinger, R.H.
The high-resolution structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase reveals a twist in the plane of bound phosphoenolpyruvate
Biochemistry
42
3766-3776
2003
Escherichia coli (P0AB91), Escherichia coli
Manually annotated by BRENDA team
Furdui, C.M.; Sau, A.K.; Yaniv, O.; Belakhov, V.; Woodard, R.W.; Baasov, T.; Anderson, K.S.
The use of (E)- and (Z)-phosphoenol-3-fluoropyruvate as mechanistic probes reveals significant differences between the active sites of KDO8P and DAHP synthases
Biochemistry
44
7326-7335
2005
Escherichia coli
Manually annotated by BRENDA team
Hu, C.; Jiang, P.; Xu, J.; Wu, Y.; Huang, W.
Mutation analysis of the feedback inhibition site of phenylalanine-sensitive 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase of Escherichia coli
J. Basic Microbiol.
43
399-406
2003
Escherichia coli
Manually annotated by BRENDA team
Xu, J.; Hu, C.; Shen, S.; Wang, W.; Jiang, P.; Huang, W.
Requirement of the N-terminus for dimer formation of phenylalanine-sensitive 3-deoxy-D-arabino-heptulosonate synthase AroG of Escherichia coli
J. Basic Microbiol.
44
400-406
2004
Escherichia coli
Manually annotated by BRENDA team
Furdui, C.; Zhou, L.; Woodard, R.W.; Anderson, K.S.
Insights into the mechanism of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (Phe) from Escherichia coli using a transient kinetic analysis
J. Biol. Chem.
279
45618-45625
2004
Escherichia coli
Manually annotated by BRENDA team
Williamson, R.M.; Pietersma, A.L.; Jameson, G.B.; Parker, E.J.
Stereospecific deuteration of 2-deoxyerythrose 4-phosphate using 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
Bioorg. Med. Chem. Lett.
15
2339-2342
2005
Escherichia coli
Manually annotated by BRENDA team
Walker, S.R.; Parker, E.J.
Synthesis and evaluation of a mechanism-based inhibitor of a 3-deoxy-D-arabino heptulosonate 7-phosphate synthase
Bioorg. Med. Chem. Lett.
16
2951-2954
2006
Escherichia coli
Manually annotated by BRENDA team
Ran, N.; Frost, J.W.
Directed evolution of 2-keto-3-deoxy-6-phosphogalactonate aldolase to replace 3-deoxy-D-arabino-heptulosonic acid 7-phosphate synthase
J. Am. Chem. Soc.
129
6130-6139
2007
Escherichia coli
Manually annotated by BRENDA team
Yakandawala, N.; Romeo, T.; Friesen, A.D.; Madhyastha, S.
Metabolic engineering of Escherichia coli to enhance phenylalanine production
Appl. Microbiol. Biotechnol.
78
283-291
2008
Escherichia coli, Escherichia coli NST 37 / ATCC 31882
Manually annotated by BRENDA team
Walker, S.; Cumming, H.; Parker, E.
Substrate and reaction intermediate mimics as inhibitors of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase
Org. Biomol. Chem.
7
3031-3035
2009
Escherichia coli
-
Manually annotated by BRENDA team
Walker, S.R.; Jiao, W.; Parker, E.J.
Synthesis and evaluation of dual site inhibitors of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
Bioorg. Med. Chem. Lett.
21
5092-5097
2011
Escherichia coli
Manually annotated by BRENDA team
Tzin, V.; Malitsky, S.; Ben Zvi, M.M.; Bedair, M.; Sumner, L.; Aharoni, A.; Galili, G.
Expression of a bacterial feedback-insensitive 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase of the shikimate pathway in Arabidopsis elucidates potential metabolic bottlenecks between primary and secondary metabolism
New Phytol.
194
430-439
2012
Escherichia coli (P0AB91)
Manually annotated by BRENDA team
Sobota, J.M.; Gu, M.; Imlay, J.A.
Intracellular hydrogen peroxide and superoxide poison 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase, the first committed enzyme in the aromatic biosynthetic pathway of Escherichia coli
J. Bacteriol.
196
1980-1991
2014
Escherichia coli (P0AB91), Escherichia coli
Manually annotated by BRENDA team
Tzin, V.; Rogachev, I.; Meir, S.; Moyal Ben Zvi, M.; Masci, T.; Vainstein, A.; Aharoni, A.; Galili, G.
Tomato fruits expressing a bacterial feedback-insensitive 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase of the shikimate pathway possess enhanced levels of multiple specialized metabolites and upgraded aroma
J. Exp. Bot.
64
4441-4452
2013
Escherichia coli (P0AB91)
Manually annotated by BRENDA team
Wu, W.B.; Guo, X.L.; Zhang, M.L.; Huang, Q.G.; Qi, F.; Huang, J.Z.
Enhancement of L-phenylalanine production in Escherichia coli by heterologous expression of Vitreoscilla hemoglobin
Biotechnol. Appl. Biochem.
65
476-483
2018
Escherichia coli (P00888), Escherichia coli, Escherichia coli K12 (P00888)
Manually annotated by BRENDA team
Balachandran, N.; Heimhalt, M.; Liuni, P.; To, F.; Wilson, D.J.; Junop, M.S.; Berti, P.J.
Potent inhibition of 3-deoxy-D-arabinoheptulosonate-7-phosphate (DAHP) synthase by DAHP oxime, a phosphate group mimic
Biochemistry
55
6617-6629
2016
Escherichia coli (C3TIE2)
Manually annotated by BRENDA team
Balachandran, N.; To, F.; Berti, P.J.
Linear free energy relationship analysis of transition state mimicry by 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) oxime, a DAHP synthase inhibitor and phosphate mimic
Biochemistry
56
592-601
2017
Escherichia coli (C3TIE2)
Manually annotated by BRENDA team
Heimhalt, M.; Jiang, S.; Berti, P.J.
Eliminating competition Characterizing and eliminating competitive binding at separate sites between DAHP synthases essential metal ion and the inhibitor DAHP oxime
Biochemistry
57
6679-6687
2018
Escherichia coli (C3TIE2)
Manually annotated by BRENDA team
Cui, D.; Deng, A.; Bai, H.; Yang, Z.; Liang, Y.; Liu, Z.; Qiu, Q.; Wang, L.; Liu, S.; Zhang, Y.; Shi, Y.; Qi, J.; Wen, T.
Molecular basis for feedback inhibition of tyrosine-regulated 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from Escherichia coli
J. Struct. Biol.
206
322-334
2019
Escherichia coli (P00888), Escherichia coli, Escherichia coli K12 (P00888)
Manually annotated by BRENDA team