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Information on EC 2.5.1.19 - 3-phosphoshikimate 1-carboxyvinyltransferase and Organism(s) Escherichia coli and UniProt Accession P0A6D3

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Escherichia coli
UNIPROT: P0A6D3 not found.
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Word Map
  • 2.5.1.19
  • excitatory
  • postsynaptic
  • depolarization
  • ipsps
  • afferent
  • monosynaptic
  • hippocampal
  • pyramidal
  • presynaptic
  • synapses
  • latency
  • fire
  • nmda
  • motoneuron
  • interneurons
  • glyphosate
  • firing
  • hyperpolarization
  • electrophysiological
  • antidromic
  • summation
  • subthreshold
  • bicuculline
  • gabaa
  • disynaptic
  • non-nmda
  • tetanic
  • 6-cyano-7-nitroquinoxaline-2,3-dione
  • volley
  • schaffer
  • quantal
  • unitary
  • paired-pulse
  • orthodromic
  • glyphosate-resistant
  • short-latency
  • thalamocortical
  • biotechnology
  • electrotonic
  • reticulospinal
  • radiatum
  • homonymous
  • drug development
  • agriculture
  • synthesis
  • interstimulus
  • funiculus
  • suprathreshold
  • preganglionic
  • low-threshold
  • impale
  • decerebrate
  • biocytin
  • afterhyperpolarization
The taxonomic range for the selected organisms is: Escherichia coli
The expected taxonomic range for this enzyme is: Bacteria, Eukaryota, Archaea
Synonyms
epsps, 5-enolpyruvylshikimate-3-phosphate synthase, epsp synthase, cp4 epsps, mepsps, 5-enolpyruvylshikimate 3-phosphate synthase, 5-enol-pyruvylshikimate-3-phosphate synthase, caepsps, 5-enol-pyruvyl-shikimate-3-phosphate synthase, 3-phosphoshikimate 1-carboxyvinyltransferase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5-enolpyruvylshikimate 3-phosphate synthase
5-enolpyruvylshikimate-3-phosphate synthase
-
E. coli EPSPS
-
3-enolpyruvylshikimate 5-phosphate synthase
-
-
-
-
3-enolpyruvylshikimic acid-5-phosphate synthetase
-
-
-
-
5'-enolpyruvylshikimate-3-phosphate synthase
-
-
-
-
5-enolpyruvyl-3-phosphoshikimate synthase
-
-
-
-
5-enolpyruvylshikimate-3-phosphate synthase
5-enolpyruvylshikimate-3-phosphate synthetase
-
-
-
-
5-enolpyruvylshikimate-3-phosphoric acid synthase
-
-
-
-
5-enolpyruvylshikimic acid-3-phosphate synthase
-
-
-
-
enolpyruvylshikimate 3-phosphate synthase
-
-
enolpyruvylshikimate phosphate synthase
-
-
-
-
enolpyruvylshikimate-3-phosphate synthase
-
-
EPSP synthase
synthase, 5-enolpyruvoylshikimate 3-phosphate
-
-
-
-
additional information
enzyme belongs to the family of enolpyruvyl transferases
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
phosphoenolpyruvate + 3-phosphoshikimate = phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
show the reaction diagram
phosphoenolpyruvate + 3-phosphoshikimate = phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
show the reaction diagram
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
enolpyruvate group transfer
induced-fit mechanism, formation of a 2-(S) configured tetrahedral reaction intermediate by covalent linkage of the two substrates
enolpyruvate group transfer
SYSTEMATIC NAME
IUBMB Comments
phosphoenolpyruvate:3-phosphoshikimate 5-O-(1-carboxyvinyl)-transferase
-
CAS REGISTRY NUMBER
COMMENTARY hide
9068-73-9
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
phosphoenolpyruvate + 3-phosphoshikimate
?
show the reaction diagram
-
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
show the reaction diagram
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
show the reaction diagram
shikimate 3-phosphate + phosphoenolpyruvate
phosphate + 5-enolpyruvylshikimate 3-phosphate
show the reaction diagram
shikimate 3-phosphate + phosphoenolpyruvate
phosphate + 5-enpolpyruvylshikimate 3-phosphate
show the reaction diagram
via formation of a 2-(S)-tetrahedral reaction intermediate (TI), pH 7.5, 25°C, 30 min
examination by malachite green phosphate-release assay
-
?
5-enolpyruvylshikimate 3-phosphate + H2O
5-enolpyruvylshikimate 3-phosphate ketal
show the reaction diagram
-
enzymatic hydrolysis, pH 7.0, 25°C, in presence of phosphate scavenging system and excess of enzyme
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
show the reaction diagram
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
show the reaction diagram
shikimate 3-phosphate + phosphoenolpyruvate
phosphate + 5-enpolpyruvylshikimate 3-phosphate
show the reaction diagram
-
enolpyruvylshikimate 3-phosphate ketal formation from shikimate 3-phosphate (radiolabelled) and phosphoenolypyruvate (in excess over shikimate 3-phosphate) by hydrolysis of product 5-enpolpyruvylshikimate 3-phosphate in presence of 25% excess of enzyme, pH 7.0, 25°C
analysis of products by ion-paired C18 reverse-phase HPLC and scintillation counting
-
?
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
show the reaction diagram
-
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
show the reaction diagram
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
show the reaction diagram
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
show the reaction diagram
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
(3R,4S,5R)-4-hydroxy-5-[(2R)-1-hydroxy-1-oxo-2-phosphono-propan-2-yl]oxy-3-phosphonooxy-cyclohexene-1-carboxylic acid
RP-TI, (R)-phosphonate analogue of the (S)-tetrahedral reaction intermediate, very potent competitive inhibitor of EPSPS forward reaction, binding induces substantial conformational change in enzyme’s backbone and active site (e.g., Glu341 and Arg124)
(3R,4S,5R)-4-hydroxy-5-[(2S)-1-hydroxy-1-oxo-2-phosphono-propan-2-yl]oxy-3-phosphonooxy-cyclohexene-1-carboxylic acid
SP-TI, (S)-phosphonate analogue of the (S)-tetrahedral reaction intermediate, moderate competitive inhibitor of EPSPS forward reaction
(3R,4S,5R)-5-((R)-1-carboxy-1-phosphono-ethoxy)-4-hydroxy-3-phosphonooxy-cyclohex-1-enecarboxylic acid
analogue of the tetrahedral reaction intermediate, competitive to both substrates, binding structure analysis, binding induces conformational changes to residues Arg124 and Glu341 within the active site, which results in structural alterations in the amino-terminal globular domain of the enzyme
(3R,4S,5R)-5-((S)-1-carboxy-1-phosphono-ethoxy)-4-hydroxy-3-phosphonooxy-cyclohex-1-enecarboxylic acid
analogue of the tetrahedral reaction intermediate, competitive to both substrates, binding structure analysis, binding induces no conformational changes
(3R,4S,5R)-5-[(2R)-1,1-difluoro-3-hydroxy-3-oxo-2-phosphonooxy-propan-2-yl]oxy-4-hydroxy-3-phosphonooxy-cyclohexene-1-carboxylic acid
2F-TI, (R)-difluoromethyl analogue of the (S)-tetrahedral reaction intermediate, very potent competitive inhibitor of EPSPS forward reaction
glyphosate
N-phosphonomethylglycine
mechanism of inhibition in atomic detail
(Z)-3-fluorophosphoenolpyruvate
-
competitive vs. phosphoenolpyruvate at saturated shikimate 3-phosphate concentration and vice versa
3-Bromopyruvate
-
0.1 mM, approx. 80% inactivation after 5 min, maximum rate-constant: 0.31/min, substrates or a combination of shikimate 3-phosphat and glyphosate protect from inactivation, bromopyruvate modifies residues C408 and L411
5-Deoxy-shikimate 3-phosphate
-
competitive vs. shikimate 3-phosphate
5-enolpyruvylshikimate 3-phosphate
-
product inhibition
Carboxyallenyl phosphate
-
strong
diethyldicarbonate
-
inactivation with a second-order rate constant of 220/M/min, subtstrates protect from inactivation, enzyme activity is recovered by treatment with hydroxylamine
glyphosate
-
competitive inhibition of the wild-type enzyme, mutant T42M is less sensitive
N-phosphonomethylglycine
phosphoenolpyruvate
-
substrate inhibition
pyruvate
-
20 mM, 85% inactivation after 1 h in the presence of cyanoborhydride, no inactivation in the absence of cyanoborhydride, preincubation with 5-enolpyruvylshikimate or a combination of shikimate 3-phosphate and glyphosate prevents from inactivation
additional information
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.018 - 2
3-phosphoshikimate
0.04 - 3.8
phosphoenolpyruvate
0.06 - 0.1
shikimate 3-phosphate
0.0025 - 0.0036
3-phosphoshikimate
0.003 - 0.011
5-enolpyruvylshikimate 3-phosphate
1.2 - 4.6
phosphate
0.0024 - 22.5
phosphoenolpyruvate
0.02 - 0.135
shikimate 3-phosphate
additional information
additional information
-
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.026 - 100
3-phosphoshikimate
0.026 - 100
phosphoenolpyruvate
56.6
3-phosphoshikimate
-
-
0.000012
5-enolpyruvylshikimate 3-phosphate
-
5-enpolpyruvylshikimate 3-phosphate ketal formation by hydrolysis of radiolabelled 5-enpolpyruvylshikimate 3-phosphate, pH 7.0, 25°C
0.0000045 - 0.00008
phosphoenolpyruvate
additional information
phosphoenolpyruvate
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0016 - 910000000
3-phosphoshikimate
0.0007 - 930000000
phosphoenolpyruvate
Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0000039
(3R,4S,5R)-4-hydroxy-5-[(2R)-1-hydroxy-1-oxo-2-phosphono-propan-2-yl]oxy-3-phosphonooxy-cyclohexene-1-carboxylic acid
+/-0.6 nM
0.00076
(3R,4S,5R)-4-hydroxy-5-[(2S)-1-hydroxy-1-oxo-2-phosphono-propan-2-yl]oxy-3-phosphonooxy-cyclohexene-1-carboxylic acid
+/-200 nM
0.000016
(3R,4S,5R)-5-((R)-1-carboxy-1-phosphono-ethoxy)-4-hydroxy-3-phosphonooxy-cyclohex-1-enecarboxylic acid
versus 3-phosphoshikimate
0.00075
(3R,4S,5R)-5-((S)-1-carboxy-1-phosphono-ethoxy)-4-hydroxy-3-phosphonooxy-cyclohex-1-enecarboxylic acid
versus 3-phosphoshikimate
0.0000078
(3R,4S,5R)-5-[(2R)-1,1-difluoro-3-hydroxy-3-oxo-2-phosphonooxy-propan-2-yl]oxy-4-hydroxy-3-phosphonooxy-cyclohexene-1-carboxylic acid
+/-0.5 nM
0.0003 - 0.09
glyphosate
0.0029 - 0.0064
(Z)-3-fluorophosphoenolpyruvate
0.0126
5-Deoxy-shikimate 3-phosphate
-
-
0.0015 - 0.0305
glyphosate
0.0008 - 0.96
N-phosphonomethylglycine
additional information
glyphosate
IC50 VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.05 - 8.2
glyphosate
additional information
glyphosate
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
18.9
mutant A183T, with respect to phosphoenolpyruvate
20
recombinant His-tagged wild-type enzyme
22
+/-0.4 micromol/min/mg, mutant P101S
24
recombinant wild-type enzyme
26.5
mutant G96A/A183T, with respect to phosphoenolpyruvate
28
+/-1 micromol/min/mg, mutant P101G
31
+/-0.5 micromol/min/mg, mutant P101A
34
with respect to phosphoenolpyruvate
37.4
mutant G96A, with respect to phosphoenolpyruvate
50
+/-1 micromol/min/mg
8
+/-0.2 micromol/min/mg, mutant P101L
0.0064
-
recombinant enzyme, activity in crude extracts
0.0076
-
wild-type enzyme, cell exract
0.0357
-
mutant T42M, cell extract
21.1
-
phosphate + 5-enolpyruvylshikimate 3-phosphate, recombinant enzyme
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
7.8
-
wild-type enzyme
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5.6 - 8.4
-
H385N mutantt enzyme
6 - 8.4
-
wild-type enzyme
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
44000
SDS-PAGE
42000
-
gel filtration
45000
-
* 45000, wild-type and mutant enzyme, SDS-PAGE
46110
-
calculated from polypeptide sequence of aroA gene product
46112
-
1 * 46112, deduced from nucleotide sequence
49000
-
1 * 49000
55000
-
gel filtration
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
?
-
* 45000, wild-type and mutant enzyme, SDS-PAGE
monomer
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
enzyme complexed with inhibitor (3R,4S,5R)-5-((S)-1-carboxy-1-phosphono-ethoxy)-4-hydroxy-3-phosphonooxy-cyclohex-1-enecarboxylic acid or with inhibitor (3R,4S,5R)-5-((R)-1-carboxy-1-phosphono-ethoxy)-4-hydroxy-3-phosphonooxy-cyclohex-1-enecarboxylic acid, 100 mg/ml recombinant enzyme in 2.5 M sodium formate with 10 mM inhibitor, hanging drop vapour diffusion method, 19°C, X-ray diffraction at -180°C using the rotation method on single flash-frozen crystals, structure determination and analysis at 1.5 and 1.9 A resolution, respectively
enzyme in complex with shikimate/glyphosate at 1.5 A resolution
in presence of 10 mM inhibitor (3R,4S,5R)-5-[(2R)-1,1-difluoro-3-hydroxy-3-oxo-2-phosphonooxy-propan-2-yl]oxy-4-hydroxy-3-phosphonooxy-cyclohexene-1-carboxylic acid (2F-TI, PDB: 2PQ9), 2F-TI-binding induces large conformational change of Glu341 side chain compared to TI-binding, crystals: space group P2(1)2(1)2(1), unit cell parameters: a: 58.2, b: 85.1, c: 87.6, beta: 90°, hanging-drop vapour-diffusion, sodium format conditions, molecular replacement using PDB: 1G6S as model
mutants P101S and P101L in complex with shikimate 3-phosphate and with or without inhibitor glyphosate, long-range structural change in glyphosate binding site compared to wild-type, Gly96 and Thr97 are shifted towards the glyphosate-binding site, which gets slightly narrowed, crystals: space group: P2(1)2(1)2(1), unit cell parameters: a: 57.6-57.8, b: 85.1-85.6, c: 87.9-88.3, beta: 90°, hanging-drop vapour-diffusion, protein solution (37.5 mg/ml, 5 mM inhibitor and/or 5 mM shikimate 3-phosphate), 19°C, molecular replacement using PDB: 1G6S as model
purified recombinant wild-type and mutant enzymes in complex with the substrates, at 19°C, from 4 M sodium formate in presence of 5 mM 3-phosphoshikimate and 5 mM phosphoenolpyruvate, X-ray diffraction structure determination and analysis at 1.6 A resolution
semiempirical molecular modelling using, among others, the crystal structure of EPSPS mutant D313A (PDB: 1Q36) as model for assignment of protonation states of all basic amino acids in the active site: in the enzyme-tetrahedral reaction intermediate (TI) complex is residue His385 in a neutral form (with protonated epsilon-N atom) while residues Lys22, Lys340 and Lys411 are protonated, hydrogen bonds occur between Lys22 and the carboxylate oxygen atom of the phosphoenolpyruvate moiety of the TI, Asp313 has only minor effects on TI positioning within the active site but mediates as a base the attack of the TI C4-hydroxyl group on the TI methyl group prior to EPSP formation
using the hanging drop, vapor-diffusion method in the presence of 5 mM 3-phosphoshikimate
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
A183T
38fold decrease in phosphoenolpyruvate-binding affinity, more solvent-exposed tryptophan residues and lower stability against guanidine hydrochloride compared to wild-type and mutant G96A, midpoint guanidine hydrochloride concentration of unfolding: 0.7 M, higher structural flexibility and decrease of secondary structure (28% alpha helix, 35% beta sheet) compared to wild-type (40% alpha helix, 31% beta sheet) and lowest resistance against proteolysis, residue A183 located on the exterior in the N-terminal domain
D313A
D313C
compared to wild-type mutations of D313 causes kcat to decrease. In the mutant D313C the kcat is smaller than in other mutants (1200fold). Cys is ionizable and can potentially act as an acid/base catalyst, or the thiolate form can stabilize cationic intermediates electrostatically. This accounts for the higher catalytic activity for D313C than for D313A: The effects on Km(3-phosphoshikimate) or Km (phosphoenolpyruvate) are modest
D313L
compared to wild-type mutations of D313 causes kcat to decrease up to 30000fold while the effects on Km (3-phosphoshikimate) or Km (phosphoenolpyruvate) are modest, never more than 40fold
D313N
D49A
41% of wild-type activity
E341A
E341C
compared to wild-type mutations of D313 causes kcat to decrease up to 30000fold while the effects on Km (3-phosphoshikimate) or Km (phosphoenolpyruvate) are modest, never more than 40fold
E341M
compared to wild-type mutations of D313 causes kcat to decrease up to 30000fold while the effects on Km (3-phosphoshikimate) or Km (phosphoenolpyruvate) are modest, never more than 40fold
E341Q
G96A/A183T
glyphosate-insensitive, 8fold decrease in phosphoenolpyruvate-binding affinity, more solvent-exposed tryptophan residues and lower stability against guanidine hydrochloride compared to wild-type and mutant G96A, midpoint guanidine hydrochloride concentration of unfolding: 0.65 M, higher structural flexibility and decrease of secondary structure (36% alpha helix, 38% beta sheet) compared to wild-type (40% alpha helix, 31% beta sheet)
H385A
K340A
2.4% of wild-type activity
K411A
10.4% of wild-type activity
N94A
50% of wild-type activity
P101A
slight decrease in catalytic efficiency, decreased inhibitory potency of glyphosate
P101G
slight decrease in catalytic efficiency, decreased inhibitory potency of glyphosate
P101L
lowest catalytic efficiency, decreased inhibitory potency of glyphosate due to long-range conformational changes
P101S
Q171A
1.7% of wild-type activity
R100M
0.2% of wild-type activity
R124A
19.6% of wild-type activity
R27A
binding of shikimate 3-phosphate is abolished
R344K
31.7% of wild-type activity
R344M
16.3% of wild-type activity
R386M
15.8% of wild-type activity
T971I
the single site T97I mutation renders the enzyme sensitive to glyphosate and causes a substantial decrease in the affinity for phosphoenolpyruvate. Km (3-phosphoshikimate): 0.077 mM, Km (phosphoenolpyruvate): 0.38, kcat/Km (phosphoenolpyruvate): 23000/Msec, kcat/Km (3-phosphoshikimate): 1200000/Msec
T97I/P101S
mutant is essentially insensitive to glyphosate (Ki 2.4 mM) but maintains high affinity for the substrate phosphoenolpyruvate (Km: 0.1 mM) and 3-phosphoshikimate (Km: 0.077 mM). kcat/Km (phosphoenolpyruvate): 57000/Msec, kcat/Km (3-phosphoshikimate): 740000/Msec. The crystal structure at 1.7 A resolution reveals that the dual mutation causes a shift of residue Gly96 toward the glyphosate binding site, impairing efficient binding of glyphosate, while the side chain of Ile97 points away from the substrate binding site, facilitating phosphoenolpyruvate utilization
Y200F
1% of wild-type activity
D242A
-
site-directed mutagenesis, the mutation is responsible for the high increase in activity
D348A
-
site-directed mutagenesis, the mutation is responsible for the high increase in activity
G96A
-
glyphosate-insensitive
G96A/A183T
-
mutant enzyme is resistant to glyphosate
R100A
-
site-directed mutagenesis, the mutation is responsible for the high increase in activity
T42M
-
site-directed mutagenesis, the mutation is responsible for the glyphosate resistance and the low Km for phosphoenolpyruvate
additional information
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
complete unfolding of the protein at 2.5 M guanidine hydrochloride at pH 7.8 (midpoint guanidine hydrochloride concentration of unfolding: 0.8 +/-0.1 M), enhanced flexibility, lower stability and increased proteolysis of mutants A183T and G96A/A183T compared to wild-type and mutant G96A as revealed by susceptibility to proteolytic digestion with trypsin, thermolysin, pronase (25°C for various time intervals), unfolding profiles (intrinsic tryptophan fluorescence measurements at 340 nm) after treatment with guanidine hydrochloride (30 min at 25°C) and dynamic quenching with acrylamide or not, and secondary structure determination by circular dichroism spectroscopy
dithiothreitol reverses aggregation which sometimes occurs after storage at -20°C
-
dithiothreitol, 0.4 mM, stabilizes during purification
-
glycerol, 50% v/v, stabilizes
-
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
-20°C, 50 mM Tris-HCl, pH 7.5, 50 mM KCl, 0.4 mM dithiothreitol, 50% v/v glycerol, at least 4 months, no loss of activity
-
-20°C, in 50% v/v glycerol, enzyme concentration 5 mg/ml, at least 1 year
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
from supernatant from 25% (w/v) ammonium sulfate precipitation of crude bacterial extracts, Q-sepharose anion exchange chromatography (NaCl gradient elution) and FPLC (Mono-Q column, NaCl gradient elution)
recombinant enzyme
recombinant enzyme, ammonium sulfate, DEAE-Sephacel, phenyl-Sepharose, phosphocellulose chromatography
-
recombinant wild-type and G96A mutant enzyme
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed as a His-tagged fusion protein
in pET24d for expression in Escherichia coli DE3
mutant G96A is expressed in Escherichia coli BL21 cells and Oryza sativa
overexpressed in Escherichia coli
overexpression in Escherichia coli
overexpression of wild-type and mutant enzymes in strain BL21(DE3)
overexpression of wild-type, His-tagged wild-type and several mutant enzymes in Escherichia coli
wild-type and mutants in pET-24d for expression in Escherichia coli BL21(DE3)
Escherichia coli structural gene aroA
-
expression of the wild-type enzyme and of the chimeric mutant aroA-M1, comprising N-terminal part of the Escherichia coli enzyme and the C-terminal part of the enzyme from Salmonella typhimurium in strain XL1-Blue
-
expression of the wild-type enzyme, of the chimeric mutant aroA-M1, comprising N-terminal part of the Escherichia coli enzyme and the C-terminal part of the enzyme from Salmonella typhimurium, and of T42M-aroA mutant in strain BL21(DE3)
-
expression of wild-type and chimeras of Salmonella and Escherichia coli mutant enzymes in Escherichia coli
-
expression of wild-type and G96A mutant enzyme in Escherichia coli
-
mutant enzyme G96A/A183T is transferred to Brassica napus via Agrobacterium-mediated transformation. Transgenic plants are resistant to glyphosate at a concentration of 10 mM whereas the non-transformed control plants are unable to survive 1 mM glyphosate
-
overexpression in Escherichia coli
-
subcloned from bacteriophage lambdapserC into multicopy plasmid pAT153 with subsequent transformation of Escherichia coli AB2829 CGSC2829 cells
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
drug development
differential inhibition of class I and class II EPSPS by tetrahedral reaction intermediate-analogues possibly due to alteration of open-close transition during catalysis and/or upon inhibitor binding but not due to energy differences during complex formation
synthesis
drug development
-
protonated enolpyruvylshikimate 3-phosphate (cation) intermediate as potential target for inhibitor design
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Coggins, J.R.; Duncan, K.; Anton, I.A.; Boocock, M.R.; Chaudhuri, S.; Lambert, J.M.; Lewendon, A.; Millar, G.; Mousdale, D.M.; Smith, D.D.S.
The anatomy of a multifunctional enzyme
Biochem. Soc. Trans.
15
754-759
1987
Aspergillus nidulans, Saccharomyces cerevisiae, Escherichia coli, Neurospora crassa, Salmonella enterica subsp. enterica serovar Typhimurium
Manually annotated by BRENDA team
Lewendon, A.; Coggins, J.R.
3-Phosphoshikimate 1-carboxyvinyltransferase from Escherichia coli
Methods Enzymol.
142
342-348
1987
Escherichia coli, Klebsiella pneumoniae, Neurospora crassa, Pisum sativum, Salmonella enterica subsp. enterica serovar Typhimurium
Manually annotated by BRENDA team
Lewendon, A.; Coggins, J.R.
Purification of 5-enolpyruvylshikimate 3-phosphate synthase from Escherichia coli
Biochem. J.
213
187-191
1983
Escherichia coli
Manually annotated by BRENDA team
Duncan, K.; Lewendon, A.; Coggins, J.R.
The purification of 5-enolpyruvylshikimate 3-phosphate synthase from an overproducing strain of Escherichia coli
FEBS Lett.
165
121-127
1984
Escherichia coli
Manually annotated by BRENDA team
Gruys, K.J.; Walker, M.C.; Sikorski, J.A.
Substrate synergism and the steady-state kinetic reaction mechanism for EPSP synthase from Escherichia coli
Biochemistry
31
5534-5544
1992
Escherichia coli
Manually annotated by BRENDA team
Huynh, Q.K.
Reaction of 5-enol-pyruvoylshikimate-3-phosphate synthase with diethyl pyrocarbonate: evidence for an essential histidine residue
Arch. Biochem. Biophys.
258
233-239
1987
Escherichia coli
Manually annotated by BRENDA team
Huynh, Q.K.
Inactivation of 5-enolpyruvylshikimate 3-phosphate synthase by its substrate analogue pyruvate in the presence of sodium cyanoborohydride
Biochem. Biophys. Res. Commun.
185
317-322
1992
Escherichia coli
Manually annotated by BRENDA team
Huynh, Q.K.
5-Enolpyruvylshikimate-3-phosphate synthase from Escherichia coli--the substrate analogue bromopyruvate inactivates the enzyme by modifying Cys-408 and Lys-411
Arch. Biochem. Biophys.
284
407-412
1991
Escherichia coli, Escherichia coli N5259
Manually annotated by BRENDA team
Abdel-Meguid, S.S.; Smith, W.W.; Bild, G.S.
Crystallization of 5-enolpyruvylshikimate 3-phosphate synthase from Escherichia coli
J. Mol. Biol.
186
673
1985
Escherichia coli
Manually annotated by BRENDA team
Shuttleworth, W.A.; Evans, J.N.S.
The H385N mutant of 5-enolpyruvylshikimate-3-phosphate synthase: kinetics, fluorescence, and nuclear magnetic resonance studies
Arch. Biochem. Biophys.
334
37-42
1996
Escherichia coli
Manually annotated by BRENDA team
Jakeman, D.L.; Mitchell, D.J.; Shuttleworth, W.A.; Evans, J.N.
On the mechanism of 5-enolpyruvylshikimate-3-phosphate synthase
Biochemistry
37
12012-12019
1998
Escherichia coli
Manually annotated by BRENDA team
He, M.; Yang, Z.Y.; Nie, Y.F.; Wang, J.; Xu, P.
A new type of class I bacterial 5-enopyruvylshikimate-3-phosphate synthase mutants with enhanced tolerance to glyphosate
Biochim. Biophys. Acta
1568
1-6
2001
Escherichia coli, Salmonella enterica subsp. enterica serovar Typhimurium
Manually annotated by BRENDA team
Stauffer, M.E.; Young, J.K.; Evans, J.N.S.
Shikimate-3-phosphate binds to the isolated N-terminal domain of 5-enolpyruvylshikimate-3-phosphate synthase
Biochemistry
40
3951-3957
2001
Escherichia coli (P0A6D3)
Manually annotated by BRENDA team
Schonbrunn, E.; Eschenburg, S.; Shuttleworth, W.A.; Schloss, J.V.; Amrhein, N.; Evans, J.N.S.; Kabsch, W.
Interaction of the herbicide glyphosate with its target enzyme 5-enolpyruvylshikimate 3-phosphate synthase in atomic detail
Proc. Natl. Acad. Sci. USA
98
1376-1380
2001
Escherichia coli (P0A6D3)
Manually annotated by BRENDA team
Eschenburg, S.; Healy, M.L.; Priestman, M.A.; Lushington, G.H.; Schonbrunn, E.
How the mutation glycine96 to alanine confers glyphosate insensitivity to 5-enolpyruvyl shikimate-3-phosphate synthase from Escherichia coli
Planta
216
129-135
2002
Escherichia coli, Klebsiella pneumoniae
Manually annotated by BRENDA team
Mizyed, S.; Wright, J.E.; Byczynski, B.; Berti, P.J.
Identification of the catalytic residues of AroA (Enolpyruvylshikimate 3-phosphate synthase) using partitioning analysis
Biochemistry
42
6986-6995
2003
Escherichia coli (P0A6D3)
Manually annotated by BRENDA team
Priestman, M.A.; Healy, M.L.; Becker, A.; Alberg, D.G.; Bartlett, P.A.; Lushington, G.H.; Schonbrunn, E.
Interaction of phosphonate analogues of the tetrahedral reaction intermediate with 5-enolpyruvylshikimate-3-phosphate synthase in atomic detail
Biochemistry
44
3241-3248
2005
Escherichia coli (P0A6D3), Escherichia coli
Manually annotated by BRENDA team
He, M.; Nie, Y.F.; Xu, P.
A T42M substitution in bacterial 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) generates enzymes with increased resistance to glyphosate
Biosci. Biotechnol. Biochem.
67
1405-1409
2003
Escherichia coli, Salmonella enterica subsp. enterica serovar Typhimurium
Manually annotated by BRENDA team
Eschenburg, S.; Kabsch, W.; Healy, M.L.; Schonbrunn, E.
A new view of the mechanisms of UDP-N-acetylglucosamine enolpyruvyl transferase (MurA) and 5-enolpyruvylshikimate-3-phosphate synthase (AroA) derived from X-ray structures of their tetrahedral reaction intermediate states
J. Biol. Chem.
278
49215-49222
2003
Escherichia coli (P0A6D3), Escherichia coli
Manually annotated by BRENDA team
Wang, H.Y.; Li, Y.F.; Xie, L.X.; Xu, P.
Expression of a bacterial aroA mutant, aroA-M1, encoding 5-enolpyruvylshikimate-3-phosphate synthase for the production of glyphosate-resistant tobacco plants
J. Plant Res.
116
455-460
2003
Escherichia coli, Salmonella enterica subsp. enterica serovar Typhimurium
Manually annotated by BRENDA team
Clark, M.E.; Berti, P.J.
Enolpyruvyl activation by enolpyruvylshikimate-3-phosphate synthase
Biochemistry
46
1933-1940
2007
Escherichia coli
Manually annotated by BRENDA team
Priestman, M.A.; Healy, M.L.; Funke, T.; Becker, A.; Schoenbrunn, E.
Molecular basis for the glyphosate-insensitivity of the reaction of 5-enolpyruvylshikimate 3-phosphate synthase with shikimate
FEBS Lett.
579
5773-5780
2005
Escherichia coli (P0A6D3), Escherichia coli
Manually annotated by BRENDA team
Kahrizi, D.; Salmanian, A.H.; Afshari, A.; Moieni, A.; Mousavi, A.
Simultaneous substitution of Gly96 to Ala and Ala183 to Thr in 5-enolpyruvylshikimate-3-phosphate synthase gene of E. coli (k12) and transformation of rapeseed (Brassica napus L.) in order to make tolerance to glyphosate
Plant Cell Rep.
26
95-104
2007
Escherichia coli
Manually annotated by BRENDA team
Funke, T.; Healy-Fried, M.L.; Han, H.; Alberg, D.G.; Bartlett, P.A.; Schoenbrunn, E.
Differential inhibition of class I and class II 5-enolpyruvylshikimate 3-phosphate synthases by tetrahedral reaction intermediate analogues
Biochemistry
46
13344-13351
2007
Staphylococcus aureus, Escherichia coli (P0A6D3), Escherichia coli, Agrobacterium sp. (Q9R4E4), Agrobacterium sp., Agrobacterium sp. CP4 (Q9R4E4)
Manually annotated by BRENDA team
Haghani, K.; Salmanian, A.H.; Ranjbar, B.; Zakikhan-Alang, K.; Khajeh, K.
Comparative studies of wild type Escherichia coli 5-enolpyruvylshikimate 3-phosphate synthase with three glyphosate-insensitive mutated forms: activity, stability and structural characterization
Biochim. Biophys. Acta
1784
1167-1175
2008
Escherichia coli (P0A6D3), Escherichia coli
Manually annotated by BRENDA team
de Souza, A.X.; SantAnna, C.M.
5-Enolpyruvylshikimate-3-phosphate synthase: determination of the protonation state of active site residues by the semiempirical method
Bioorg. Chem.
36
113-120
2008
Escherichia coli (P0A6D3)
Manually annotated by BRENDA team
Healy-Fried, M.L.; Funke, T.; Priestman, M.A.; Han, H.; Schoenbrunn, E.
Structural basis of glyphosate tolerance resulting from mutations of Pro101 in Escherichia coli 5-enolpyruvylshikimate 3-phosphate synthase
J. Biol. Chem.
282
32949-32955
2007
Escherichia coli (P0A6D3), Escherichia coli
Manually annotated by BRENDA team
Berti, P.J.; Chindemi, P.
Catalytic residues and an electrostatic sandwich that promote enolpyruvyl shikimate 3-phosphate synthase (AroA) catalysis
Biochemistry
48
3699-3707
2009
Escherichia coli (P0A6D3)
Manually annotated by BRENDA team
Funke, T.; Yang, Y.; Han, H.; Healy-Fried, M.; Olesen, S.; Becker, A.; Schoenbrunn, E.
Structural basis of glyphosate resistance resulting from the double mutation Thr97 Ile and Pro101 Ser in 5-enolpyruvylshikimate-3-phosphate synthase from Escherichia coli
J. Biol. Chem.
284
9854-9860
2009
Escherichia coli (P0A6D3), Escherichia coli
Manually annotated by BRENDA team
Nasr Ramzi, S.; Sohani, M.; Shirzadian-Khorramabad, R.; Asghari, J.; Amininasab, M.
Enhancement of glyphosate tolerance in rice (Oryza sativa L.) through mutation induction in EPSPS (5-enolpyruvylshikimate-3-phosphate synthase)
Plant Gene
22
100225
2020
Escherichia coli (P0A6D3)
-
Manually annotated by BRENDA team