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phosphoenolpyruvate + 3-phosphoshikimate
?
-
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
shikimate 3-phosphate + phosphoenolpyruvate
phosphate + 5-enolpyruvylshikimate 3-phosphate
shikimate 3-phosphate + phosphoenolpyruvate
phosphate + 5-enpolpyruvylshikimate 3-phosphate
via formation of a 2-(S)-tetrahedral reaction intermediate (TI), pH 7.5, 25°C, 30 min
examination by malachite green phosphate-release assay
-
?
5-enolpyruvylshikimate 3-phosphate + H2O
5-enolpyruvylshikimate 3-phosphate ketal
-
enzymatic hydrolysis, pH 7.0, 25°C, in presence of phosphate scavenging system and excess of enzyme
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
shikimate 3-phosphate + phosphoenolpyruvate
phosphate + 5-enpolpyruvylshikimate 3-phosphate
-
enolpyruvylshikimate 3-phosphate ketal formation from shikimate 3-phosphate (radiolabelled) and phosphoenolypyruvate (in excess over shikimate 3-phosphate) by hydrolysis of product 5-enpolpyruvylshikimate 3-phosphate in presence of 25% excess of enzyme, pH 7.0, 25°C
analysis of products by ion-paired C18 reverse-phase HPLC and scintillation counting
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
-
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
-
-
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
-
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
6th enzyme in the shikimate pathway
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
penultimate step in the shikimate pathway
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
substrate binding of wild-type and mutant D313A, overview
-
-
?
shikimate 3-phosphate + phosphoenolpyruvate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
detection of inorganic phosphate by reaction with Lanzetta reagent and change in optical density at 660 nm
-
?
shikimate 3-phosphate + phosphoenolpyruvate
phosphate + 5-enolpyruvylshikimate 3-phosphate
30 min, 25°C, pH 7.5, in presence of 2 mM dithiothreitol
detection of phosphate generation with Lanzetta reagent and change in absorbance at 650 nm
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
-
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
-
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
-
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
-
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
i.e. 5-O-(1-carboxyvinyl)-3-phosphoshikimate
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
i.e. 5-O-(1-carboxyvinyl)-3-phosphoshikimate
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
i.e. 5-O-(1-carboxyvinyl)-3-phosphoshikimate
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
i.e. 5-O-(1-carboxyvinyl)-3-phosphoshikimate
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
i.e. 5-O-(1-carboxyvinyl)-3-phosphoshikimate
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
i.e. 5-O-(1-carboxyvinyl)-3-phosphoshikimate
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
i.e. 5-O-(1-carboxyvinyl)-3-phosphoshikimate
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
-
i.e. 5-O-(1-carboxyvinyl)-3-phosphoshikimate
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
transfers enolpyruvate group from phosphoenolpyruvate to 5-hydroxyl group of 3-phosphoshikimate
i.e. 5-O-(1-carboxyvinyl)-3-phosphoshikimate
r
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
sixth reaction of chorismate pathway
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
part of shikimate pathway
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
involved in chorismate biosynthesis
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-enolpyruvylshikimate 3-phosphate
-
involved in aromatic acid biosynthesis
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
-
-
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
-
key enzyme in the shikimate pathway
-
-
?
phosphoenolpyruvate + 3-phosphoshikimate
phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate
-
the enzyme must promote breakdown of enolpyruvylshikimate 3-phosphate though enolpyruvyl activation, forming either the enolpyruvylshikimate 3-phosphate cation or a highly cation-like transition state
-
-
?
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(3R,4S,5R)-4-hydroxy-5-[(2R)-1-hydroxy-1-oxo-2-phosphono-propan-2-yl]oxy-3-phosphonooxy-cyclohexene-1-carboxylic acid
RP-TI, (R)-phosphonate analogue of the (S)-tetrahedral reaction intermediate, very potent competitive inhibitor of EPSPS forward reaction, binding induces substantial conformational change in enzymes backbone and active site (e.g., Glu341 and Arg124)
(3R,4S,5R)-4-hydroxy-5-[(2S)-1-hydroxy-1-oxo-2-phosphono-propan-2-yl]oxy-3-phosphonooxy-cyclohexene-1-carboxylic acid
SP-TI, (S)-phosphonate analogue of the (S)-tetrahedral reaction intermediate, moderate competitive inhibitor of EPSPS forward reaction
(3R,4S,5R)-5-((R)-1-carboxy-1-phosphono-ethoxy)-4-hydroxy-3-phosphonooxy-cyclohex-1-enecarboxylic acid
analogue of the tetrahedral reaction intermediate, competitive to both substrates, binding structure analysis, binding induces conformational changes to residues Arg124 and Glu341 within the active site, which results in structural alterations in the amino-terminal globular domain of the enzyme
(3R,4S,5R)-5-((S)-1-carboxy-1-phosphono-ethoxy)-4-hydroxy-3-phosphonooxy-cyclohex-1-enecarboxylic acid
analogue of the tetrahedral reaction intermediate, competitive to both substrates, binding structure analysis, binding induces no conformational changes
(3R,4S,5R)-5-[(2R)-1,1-difluoro-3-hydroxy-3-oxo-2-phosphonooxy-propan-2-yl]oxy-4-hydroxy-3-phosphonooxy-cyclohexene-1-carboxylic acid
2F-TI, (R)-difluoromethyl analogue of the (S)-tetrahedral reaction intermediate, very potent competitive inhibitor of EPSPS forward reaction
N-phosphonomethylglycine
mechanism of inhibition in atomic detail
(Z)-3-fluorophosphoenolpyruvate
-
competitive vs. phosphoenolpyruvate at saturated shikimate 3-phosphate concentration and vice versa
3-Bromopyruvate
-
0.1 mM, approx. 80% inactivation after 5 min, maximum rate-constant: 0.31/min, substrates or a combination of shikimate 3-phosphat and glyphosate protect from inactivation, bromopyruvate modifies residues C408 and L411
5-Deoxy-shikimate 3-phosphate
-
competitive vs. shikimate 3-phosphate
5-enolpyruvylshikimate 3-phosphate
-
product inhibition
Carboxyallenyl phosphate
-
strong
diethyldicarbonate
-
inactivation with a second-order rate constant of 220/M/min, subtstrates protect from inactivation, enzyme activity is recovered by treatment with hydroxylamine
glyphosate
-
competitive inhibition of the wild-type enzyme, mutant T42M is less sensitive
phosphoenolpyruvate
-
substrate inhibition
pyruvate
-
20 mM, 85% inactivation after 1 h in the presence of cyanoborhydride, no inactivation in the absence of cyanoborhydride, preincubation with 5-enolpyruvylshikimate or a combination of shikimate 3-phosphate and glyphosate prevents from inactivation
glyphosate
-
glyphosate
N-(phosphonomethyl)glycine, broad-spectrum herbicide
N-phosphonomethylglycine
-
-
N-phosphonomethylglycine
-
0.01 mM, 50% inhibition
N-phosphonomethylglycine
-
inhibition of enolpyruvate transfer, competitive vs. phosphoenolpyruvate
additional information
insensitive to inhibition by glyphosate.
-
additional information
-
insensitive to inhibition by glyphosate.
-
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0.018 - 2
3-phosphoshikimate
0.04 - 3.8
phosphoenolpyruvate
0.06 - 0.1
shikimate 3-phosphate
0.0025 - 0.0036
3-phosphoshikimate
0.003 - 0.011
5-enolpyruvylshikimate 3-phosphate
0.0024 - 22.5
phosphoenolpyruvate
0.02 - 0.135
shikimate 3-phosphate
additional information
additional information
-
0.018
3-phosphoshikimate
C-terminal His6-tagged AroA, 50 mM KCl
0.035
3-phosphoshikimate
50 mM KCl, mutant E341M
0.04
3-phosphoshikimate
50 mM KCl, mutant E341Q
0.048
3-phosphoshikimate
wild-type
0.071
3-phosphoshikimate
mutant P101S
0.077
3-phosphoshikimate
mutant P101S/T97I
0.077
3-phosphoshikimate
mutant T97I
0.08
3-phosphoshikimate
50 mM KCl, mutant E341C
0.09
3-phosphoshikimate
50 mM KCl, mutant H385A
0.1
3-phosphoshikimate
50 mM KCl, mutant E341A
0.11
3-phosphoshikimate
C-terminal His6-tagged AroA, 100 mM KCl
0.14
3-phosphoshikimate
wild-type AroA, 100 mM KCl
0.19
3-phosphoshikimate
50 mM KCl, mutant K22R value above 0.3
0.2
3-phosphoshikimate
50 mM KCl, mutant D313N
0.21
3-phosphoshikimate
50 mM KCl, mutant D313A
0.4
3-phosphoshikimate
50 mM KCl, mutant D313C
0.7
3-phosphoshikimate
50 mM KCl, mutant D313L
2
3-phosphoshikimate
50 mM KCl, mutant K22A value above 0.3
0.04
phosphoenolpyruvate
C-terminal His6-tagged AroA, 50 mM KCl
0.045
phosphoenolpyruvate
wild-type
0.05
phosphoenolpyruvate
50 mM KCl, mutant E341A
0.06
phosphoenolpyruvate
+/-0.006 mM
0.07
phosphoenolpyruvate
+/-0.005 mM, mutant P101S
0.071
phosphoenolpyruvate
mutant P101S
0.08
phosphoenolpyruvate
+/-0.005 mM, mutant P101A
0.09
phosphoenolpyruvate
+/-0.010 mM, mutant P101G
0.1
phosphoenolpyruvate
in presence of 1 mM shikimate 3-phosphate
0.1
phosphoenolpyruvate
mutant P101S/T97I
0.15
phosphoenolpyruvate
+/-0.020 mM, mutant P101L
0.15
phosphoenolpyruvate
C-terminal His6-tagged AroA, 100 mM KCl
0.16
phosphoenolpyruvate
wild-type AroA, 100 mM KCl
0.17
phosphoenolpyruvate
50 mM KCl, mutant E341C
0.19
phosphoenolpyruvate
50 mM KCl, mutant D313N
0.28
phosphoenolpyruvate
50 mM KCl, mutant D313A
0.38
phosphoenolpyruvate
mutant T97I
0.8
phosphoenolpyruvate
mutant G96A/A183T, in presence of 1 mM shikimate 3-phosphate
0.9
phosphoenolpyruvate
50 mM KCl, mutant E341Q
1.3
phosphoenolpyruvate
50 mM KCl, mutant D313C
1.5
phosphoenolpyruvate
50 mM KCl, mutant H385A
1.6
phosphoenolpyruvate
50 mM KCl, mutant D313L
1.9
phosphoenolpyruvate
50 mM KCl, mutant E341M
2.5
phosphoenolpyruvate
50 mM KCl, mutant K22R value above 0.3
3.1
phosphoenolpyruvate
mutant G96A, in presence of 1 mM shikimate 3-phosphate
3.8
phosphoenolpyruvate
mutant A183T, in presence of 1 mM shikimate 3-phosphate
0.06
shikimate 3-phosphate
+/-0.004 mM, mutant P101A
0.06
shikimate 3-phosphate
+/-0.006 mM
0.06
shikimate 3-phosphate
+/-0.010 mM, mutant P101G
0.08
shikimate 3-phosphate
+/-0.006 mM, mutant P101S
0.1
shikimate 3-phosphate
+/-0.007 mM, mutant P101L
0.0025
3-phosphoshikimate
-
recombinant overproducing strain
0.0032 - 0.0036
3-phosphoshikimate
-
-
0.0032 - 0.0036
3-phosphoshikimate
-
wild-type enzyme
0.003
5-enolpyruvylshikimate 3-phosphate
-
recombinant overproducing strain
0.007
5-enolpyruvylshikimate 3-phosphate
-
H385N mutant enzyme
0.011
5-enolpyruvylshikimate 3-phosphate
-
wild-type enzyme
1.2
phosphate
-
H385N mutant enzyme
4.6
phosphate
-
wild-type enzyme
0.0024
phosphoenolpyruvate
-
pH 7.0, 30°C, mutant EcaroA-T42M
0.015
phosphoenolpyruvate
-
wild-type enzyme
0.016
phosphoenolpyruvate
-
recombinant overproducing strain
0.021 - 0.023
phosphoenolpyruvate
-
-
0.0223
phosphoenolpyruvate
-
pH 7.0, 30°C, wild-type EcaroA
0.025
phosphoenolpyruvate
-
-
0.088
phosphoenolpyruvate
-
wild-type enzyme
0.1
phosphoenolpyruvate
-
wild-type enzyme
0.106
phosphoenolpyruvate
-
H385N mutant enzyme
2.8
phosphoenolpyruvate
-
G96A mutant enzyme
22.5
phosphoenolpyruvate
-
recombinant enzyme, in crude extracts
0.02
shikimate 3-phosphate
-
-
0.07
shikimate 3-phosphate
-
H385 mutant enzyme
0.12
shikimate 3-phosphate
-
wild-type and G96A mutant enzyme
0.135
shikimate 3-phosphate
-
wild-type enzyme
additional information
additional information
stopped-flow kinetics
-
additional information
additional information
-
stopped-flow kinetics
-
additional information
additional information
small residue substitutions for Pro101 do not alter the KM for phosphoenolpyruvate and shikimate 3-phosphate
-
additional information
additional information
-
small residue substitutions for Pro101 do not alter the KM for phosphoenolpyruvate and shikimate 3-phosphate
-
additional information
phosphoenolpyruvate
KM/KI: 13, mutant P101S
additional information
phosphoenolpyruvate
-
KM/KI: 13, mutant P101S
additional information
phosphoenolpyruvate
KM/KI: 150
additional information
phosphoenolpyruvate
-
KM/KI: 150
additional information
phosphoenolpyruvate
KM/KI: 2.3, mutant P101L
additional information
phosphoenolpyruvate
-
KM/KI: 2.3, mutant P101L
additional information
phosphoenolpyruvate
KM/KI: 4.2, mutant P101A
additional information
phosphoenolpyruvate
-
KM/KI: 4.2, mutant P101A
additional information
phosphoenolpyruvate
KM/KI: 7.5, mutant P101G
additional information
phosphoenolpyruvate
-
KM/KI: 7.5, mutant P101G
additional information
additional information
-
kinetic study
-
additional information
additional information
-
kinetic parameters of native and diethyldicarbonate-inactivated enzyme
-
additional information
additional information
-
kinetics, wild-type and mutant enzymes
-
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0.026 - 100
3-phosphoshikimate
0.026 - 100
phosphoenolpyruvate
56.6
3-phosphoshikimate
-
-
0.000012
5-enolpyruvylshikimate 3-phosphate
-
5-enpolpyruvylshikimate 3-phosphate ketal formation by hydrolysis of radiolabelled 5-enpolpyruvylshikimate 3-phosphate, pH 7.0, 25°C
0.0000045 - 0.00008
phosphoenolpyruvate
additional information
phosphoenolpyruvate
0.026
3-phosphoshikimate
50 mM KCl, mutant D313C, cosubstrate: phosphoenolpyruvate
0.3
3-phosphoshikimate
50 mM KCl, mutant K22A value above 0.3, cosubstrate: phosphoenolpyruvate
0.41
3-phosphoshikimate
50 mM KCl, mutant H385A, cosubstrate: phosphoenolpyruvate
1.1
3-phosphoshikimate
50 mM KCl, mutant D313L, cosubstrate: phosphoenolpyruvate
1.1
3-phosphoshikimate
50 mM KCl, mutant E341Q, cosubstrate: phosphoenolpyruvate
1.2
3-phosphoshikimate
50 mM KCl, mutant D313A, cosubstrate: phosphoenolpyruvate
1.7
3-phosphoshikimate
50 mM KCl, mutant E341M, cosubstrate: phosphoenolpyruvate
1.8
3-phosphoshikimate
50 mM KCl, mutant D313N, cosubstrate: phosphoenolpyruvate
3
3-phosphoshikimate
50 mM KCl, mutant K22R value above 0.3, cosubstrate: phosphoenolpyruvate
3.6
3-phosphoshikimate
50 mM KCl, mutant E341C, cosubstrate: phosphoenolpyruvate
4.2
3-phosphoshikimate
50 mM KCl, mutant E341A, cosubstrate: phosphoenolpyruvate
14
3-phosphoshikimate
wild-type AroA, 100 mM KCl, cosubstrate: phosphoenolpyruvate
32
3-phosphoshikimate
C-terminal His6-tagged AroA, 50 mM KCl, cosubstrate: phosphoenolpyruvate
100
3-phosphoshikimate
C-terminal His6-tagged AroA, 100 mM KCl, cosubstrate: phosphoenolpyruvate
0.026
phosphoenolpyruvate
50 mM KCl, mutant D313C, cosubstrate: 3-phosphoshikimate
0.3
phosphoenolpyruvate
50 mM KCl, mutant K22A value above 0.3, cosubstrate: 3-phosphoshikimate
0.41
phosphoenolpyruvate
50 mM KCl, mutant H385A, cosubstrate: 3-phosphoshikimate
1.1
phosphoenolpyruvate
50 mM KCl, mutant D313L, cosubstrate: 3-phosphoshikimate
1.1
phosphoenolpyruvate
50 mM KCl, mutant E341Q, cosubstrate: 3-phosphoshikimate
1.2
phosphoenolpyruvate
50 mM KCl, mutant D313A, cosubstrate: 3-phosphoshikimate
1.7
phosphoenolpyruvate
50 mM KCl, mutant E341M, cosubstrate: 3-phosphoshikimate
1.8
phosphoenolpyruvate
50 mM KCl, mutant D313N, cosubstrate: 3-phosphoshikimate
3
phosphoenolpyruvate
50 mM KCl, mutant K22R value above 0.3, cosubstrate: 3-phosphoshikimate
3.6
phosphoenolpyruvate
50 mM KCl, mutant E341C, cosubstrate: 3-phosphoshikimate
4.2
phosphoenolpyruvate
50 mM KCl, mutant E341A, cosubstrate: 3-phosphoshikimate
14
phosphoenolpyruvate
wild-type AroA, 100 mM KCl, cosubstrate: 3-phosphoshikimate
15
phosphoenolpyruvate
mutant A183T, in presence of 1 mM shikimate 3-phosphate
21
phosphoenolpyruvate
mutant G96A/A183T, in presence of 1 mM shikimate 3-phosphate
26.4
phosphoenolpyruvate
in presence of 1 mM shikimate 3-phosphate
29.7
phosphoenolpyruvate
mutant G96A, in presence of 1 mM shikimate 3-phosphate
32
phosphoenolpyruvate
C-terminal His6-tagged AroA, 50 mM KCl, cosubstrate: 3-phosphoshikimate
100
phosphoenolpyruvate
C-terminal His6-tagged AroA, 100 mM KCl, cosubstrate: 3-phosphoshikimate
0.0000045
phosphoenolpyruvate
-
5-enpolpyruvylshikimate 3-phosphate ketal formation in presence of shikimate 3-phosphate and equimolar phosphoenolpyruvate
0.000049
phosphoenolpyruvate
-
5-enpolpyruvylshikimate 3-phosphate ketal formation in presence of shikimate 3-phosphate and 6.7 equivalents of phosphoenolpyruvate
0.00008
phosphoenolpyruvate
-
5-enpolpyruvylshikimate 3-phosphate ketal formation in presence of shikimate 3-phosphate and 6.7 equivalents of phosphoenolpyruvate and 10 mM phosphate
additional information
phosphoenolpyruvate
kcat/KM: 240000 1/M*s, mutant P101G
additional information
phosphoenolpyruvate
-
kcat/KM: 240000 1/M*s, mutant P101G
additional information
phosphoenolpyruvate
kcat/KM: 280000 1/M*s, mutant P101A
additional information
phosphoenolpyruvate
-
kcat/KM: 280000 1/M*s, mutant P101A
additional information
phosphoenolpyruvate
kcat/KM: 290000 1/M*s, mutant P101S
additional information
phosphoenolpyruvate
-
kcat/KM: 290000 1/M*s, mutant P101S
additional information
phosphoenolpyruvate
kcat/KM: 41000 1/M*s, mutant P101L
additional information
phosphoenolpyruvate
-
kcat/KM: 41000 1/M*s, mutant P101L
additional information
phosphoenolpyruvate
kcat/KM: 640000 1/M*s
additional information
phosphoenolpyruvate
-
kcat/KM: 640000 1/M*s
additional information
shikimate 3-phosphate
kcat/KM: 200000 1/M*s, mutant P101S
additional information
shikimate 3-phosphate
-
kcat/KM: 200000 1/M*s, mutant P101S
additional information
shikimate 3-phosphate
kcat/KM: 390000 1/M*s, mutant P101A
additional information
shikimate 3-phosphate
-
kcat/KM: 390000 1/M*s, mutant P101A
additional information
shikimate 3-phosphate
kcat/KM: 390000 1/M*s, mutant P101G
additional information
shikimate 3-phosphate
-
kcat/KM: 390000 1/M*s, mutant P101G
additional information
shikimate 3-phosphate
kcat/KM: 62000 1/M*s, mutant P101L
additional information
shikimate 3-phosphate
-
kcat/KM: 62000 1/M*s, mutant P101L
additional information
shikimate 3-phosphate
kcat/KM: 640000 1/M*s
additional information
shikimate 3-phosphate
-
kcat/KM: 640000 1/M*s
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enzyme complexed with inhibitor (3R,4S,5R)-5-((S)-1-carboxy-1-phosphono-ethoxy)-4-hydroxy-3-phosphonooxy-cyclohex-1-enecarboxylic acid or with inhibitor (3R,4S,5R)-5-((R)-1-carboxy-1-phosphono-ethoxy)-4-hydroxy-3-phosphonooxy-cyclohex-1-enecarboxylic acid, 100 mg/ml recombinant enzyme in 2.5 M sodium formate with 10 mM inhibitor, hanging drop vapour diffusion method, 19°C, X-ray diffraction at -180°C using the rotation method on single flash-frozen crystals, structure determination and analysis at 1.5 and 1.9 A resolution, respectively
enzyme in complex with shikimate/glyphosate at 1.5 A resolution
in presence of 10 mM inhibitor (3R,4S,5R)-5-[(2R)-1,1-difluoro-3-hydroxy-3-oxo-2-phosphonooxy-propan-2-yl]oxy-4-hydroxy-3-phosphonooxy-cyclohexene-1-carboxylic acid (2F-TI, PDB: 2PQ9), 2F-TI-binding induces large conformational change of Glu341 side chain compared to TI-binding, crystals: space group P2(1)2(1)2(1), unit cell parameters: a: 58.2, b: 85.1, c: 87.6, beta: 90°, hanging-drop vapour-diffusion, sodium format conditions, molecular replacement using PDB: 1G6S as model
mutants P101S and P101L in complex with shikimate 3-phosphate and with or without inhibitor glyphosate, long-range structural change in glyphosate binding site compared to wild-type, Gly96 and Thr97 are shifted towards the glyphosate-binding site, which gets slightly narrowed, crystals: space group: P2(1)2(1)2(1), unit cell parameters: a: 57.6-57.8, b: 85.1-85.6, c: 87.9-88.3, beta: 90°, hanging-drop vapour-diffusion, protein solution (37.5 mg/ml, 5 mM inhibitor and/or 5 mM shikimate 3-phosphate), 19°C, molecular replacement using PDB: 1G6S as model
purified recombinant wild-type and mutant enzymes in complex with the substrates, at 19°C, from 4 M sodium formate in presence of 5 mM 3-phosphoshikimate and 5 mM phosphoenolpyruvate, X-ray diffraction structure determination and analysis at 1.6 A resolution
semiempirical molecular modelling using, among others, the crystal structure of EPSPS mutant D313A (PDB: 1Q36) as model for assignment of protonation states of all basic amino acids in the active site: in the enzyme-tetrahedral reaction intermediate (TI) complex is residue His385 in a neutral form (with protonated epsilon-N atom) while residues Lys22, Lys340 and Lys411 are protonated, hydrogen bonds occur between Lys22 and the carboxylate oxygen atom of the phosphoenolpyruvate moiety of the TI, Asp313 has only minor effects on TI positioning within the active site but mediates as a base the attack of the TI C4-hydroxyl group on the TI methyl group prior to EPSP formation
using the hanging drop, vapor-diffusion method in the presence of 5 mM 3-phosphoshikimate
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A183T
38fold decrease in phosphoenolpyruvate-binding affinity, more solvent-exposed tryptophan residues and lower stability against guanidine hydrochloride compared to wild-type and mutant G96A, midpoint guanidine hydrochloride concentration of unfolding: 0.7 M, higher structural flexibility and decrease of secondary structure (28% alpha helix, 35% beta sheet) compared to wild-type (40% alpha helix, 31% beta sheet) and lowest resistance against proteolysis, residue A183 located on the exterior in the N-terminal domain
D313C
compared to wild-type mutations of D313 causes kcat to decrease. In the mutant D313C the kcat is smaller than in other mutants (1200fold). Cys is ionizable and can potentially act as an acid/base catalyst, or the thiolate form can stabilize cationic intermediates electrostatically. This accounts for the higher catalytic activity for D313C than for D313A: The effects on Km(3-phosphoshikimate) or Km (phosphoenolpyruvate) are modest
D313L
compared to wild-type mutations of D313 causes kcat to decrease up to 30000fold while the effects on Km (3-phosphoshikimate) or Km (phosphoenolpyruvate) are modest, never more than 40fold
D49A
41% of wild-type activity
E341C
compared to wild-type mutations of D313 causes kcat to decrease up to 30000fold while the effects on Km (3-phosphoshikimate) or Km (phosphoenolpyruvate) are modest, never more than 40fold
E341M
compared to wild-type mutations of D313 causes kcat to decrease up to 30000fold while the effects on Km (3-phosphoshikimate) or Km (phosphoenolpyruvate) are modest, never more than 40fold
G96A/A183T
glyphosate-insensitive, 8fold decrease in phosphoenolpyruvate-binding affinity, more solvent-exposed tryptophan residues and lower stability against guanidine hydrochloride compared to wild-type and mutant G96A, midpoint guanidine hydrochloride concentration of unfolding: 0.65 M, higher structural flexibility and decrease of secondary structure (36% alpha helix, 38% beta sheet) compared to wild-type (40% alpha helix, 31% beta sheet)
K340A
2.4% of wild-type activity
K411A
10.4% of wild-type activity
N94A
50% of wild-type activity
P101A
slight decrease in catalytic efficiency, decreased inhibitory potency of glyphosate
P101G
slight decrease in catalytic efficiency, decreased inhibitory potency of glyphosate
P101L
lowest catalytic efficiency, decreased inhibitory potency of glyphosate due to long-range conformational changes
Q171A
1.7% of wild-type activity
R100M
0.2% of wild-type activity
R124A
19.6% of wild-type activity
R27A
binding of shikimate 3-phosphate is abolished
R344K
31.7% of wild-type activity
R344M
16.3% of wild-type activity
R386M
15.8% of wild-type activity
T971I
the single site T97I mutation renders the enzyme sensitive to glyphosate and causes a substantial decrease in the affinity for phosphoenolpyruvate. Km (3-phosphoshikimate): 0.077 mM, Km (phosphoenolpyruvate): 0.38, kcat/Km (phosphoenolpyruvate): 23000/Msec, kcat/Km (3-phosphoshikimate): 1200000/Msec
T97I/P101S
mutant is essentially insensitive to glyphosate (Ki 2.4 mM) but maintains high affinity for the substrate phosphoenolpyruvate (Km: 0.1 mM) and 3-phosphoshikimate (Km: 0.077 mM). kcat/Km (phosphoenolpyruvate): 57000/Msec, kcat/Km (3-phosphoshikimate): 740000/Msec. The crystal structure at 1.7 A resolution reveals that the dual mutation causes a shift of residue Gly96 toward the glyphosate binding site, impairing efficient binding of glyphosate, while the side chain of Ile97 points away from the substrate binding site, facilitating phosphoenolpyruvate utilization
Y200F
1% of wild-type activity
D242A
-
site-directed mutagenesis, the mutation is responsible for the high increase in activity
D348A
-
site-directed mutagenesis, the mutation is responsible for the high increase in activity
G96A
-
glyphosate-insensitive
G96A/A183T
-
mutant enzyme is resistant to glyphosate
R100A
-
site-directed mutagenesis, the mutation is responsible for the high increase in activity
T42M
-
site-directed mutagenesis, the mutation is responsible for the glyphosate resistance and the low Km for phosphoenolpyruvate
D313A
0.42% of wild-type activity
D313A
site-directed mutagenesis, comparison of the mutant active site and substrate binding structures to those of the wild-type enzyme
D313A
compared to wild-type mutations of D313 causes kcat to decrease up to 30000fold while the effects on Km (3-phosphoshikimate) or Km (phosphoenolpyruvate) are modest, never more than 40fold
D313N
5% of wild-type activity
D313N
compared to wild-type mutations of D313 causes kcat to decrease up to 30000fold while the effects on Km (3-phosphoshikimate) or Km (phosphoenolpyruvate) are modest, never more than 40fold
E341A
0.3% of wild-type activity
E341A
compared to wild-type mutations of D313 causes kcat to decrease up to 30000fold while the effects on Km (3-phosphoshikimate) or Km (phosphoenolpyruvate) are modest, never more than 40fold
E341Q
10% of wild-type activity
E341Q
compared to wild-type mutations of D313 causes kcat to decrease up to 30000fold while the effects on Km (3-phosphoshikimate) or Km (phosphoenolpyruvate) are modest, never more than 40fold
G96A
glyphosate-insensitive, 31fold decrease in phosphoenolpyruvate-binding affinity, little change with respect to structural flexibility and stability compared to wild-type, lower structural flexibility than wild-type and mutants A183T and G96A/A183T, midpoint guanidine hydrochloride concentration of unfolding: 1.1 M, residue Gly96 located at interphase between two domains
G96A
the mutation confers resistance to glyphosate
H385A
0.08% of wild-type activity
H385A
compared to wild-type mutation of H385 causes a 78fold decrease in kcat. Mutation has a 37fold effect on Km (phosphoenolpyruvate), almost no effect on Km (3-phosphoshikimate)
K22A
0.7% of wild-type activity
K22A
compared to wild-type, K22A mutation causes a more than760fold increase in Km (phosphoenolpyruvate) and a more than 100fold increase in Km(3-phosphoshikimate), indicating an important role in binding both substrates
K22R
3% of wild-type activity
K22R
compared to wild-type, K22R mutation has only a 10fold effect on kcat, presumably reflecting electrostatic stabilization of the anionic leaving groups in tetrahedral intermediate breakdown or possibly general acid catalysis by the guanidinium group. K22A mutation causes a 60fold increase in Km (phosphoenolpyruvate)
P101S
slight decrease in catalytic efficiency, decreased inhibitory potency of glyphosate due to long-range conformational changes, flexibility of Ser101 side chain disables hydrophobic bonding with carbonyl oxygen of Thr97
P101S
the substrate binding affinities, as reflected by the respective Km values, are only slightly decreased for the P101S mutant. Km (3-phosphoshikimate): 0.071 mM, Km (phosphoenolpyruvate): 0.071, kcat/Km (phosphoenolpyruvate): 230000/Msec, kcat/Km (3-phosphoshikimate): 240000/Msec. Mutant P101S is moderately inhibited by glyphosate
additional information
-
construction of chimeric mutants by fusing the N-terminal part of the Escherichia coli enzyme with the C-terminal part of the enzyme from Salmonella typhimurium, the chimeric mutant shows a 6fold lower Km for phosphoenolpyruvate, a 5fold higher Ki for glyphosate, and a 9fold higher specific activity than the wild-type enzyme from Escherichia coli
additional information
-
construction of chimeric mutants by fusing the N-terminal part of the Escherichia coli enzyme with the C-terminal part of the enzyme from Salmonella typhimurium, the chimeric mutant shows a 6fold lower Km for phosphoenolpyruvate, a 5fold higher Ki for glyphosate, and a 9fold higher specific activity than the wild-type enzyme from Escherichia coli, construction of glyphosate-resistant transgenic Nicotiana tabacum plants expressing the chimeric mutant aroA-M1 using the Agrobacterium tumefaciens strain LBA 4404 infection system
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