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Information on EC 2.4.1.66 - procollagen glucosyltransferase and Organism(s) Homo sapiens and UniProt Accession O60568

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EC Tree
     2 Transferases
         2.4 Glycosyltransferases
             2.4.1 Hexosyltransferases
                2.4.1.66 procollagen glucosyltransferase
IUBMB Comments
Involved in the synthesis of carbohydrate units in the complement system (cf. EC 2.4.1.50 procollagen galactosyltransferase).
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This record set is specific for:
Homo sapiens
UNIPROT: O60568
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Word Map
The taxonomic range for the selected organisms is: Homo sapiens
The enzyme appears in selected viruses and cellular organisms
Synonyms
galactosylhydroxylysyl glucosyltransferase, collagen glucosyltransferase, galactosylhydroxylysine glucosyltransferase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
LH3/PLOD3
-
multifunctional procollagen lysine hydroxylase and glycosyltransferase
-
collagen glucosyltransferase
-
-
-
-
collagen hydroxylysyl glucosyltransferase
-
-
-
-
galactosylhydroxylysyl glucosyltransferase
-
-
-
-
GGT
-
-
-
-
glucosyltransferase, uridine diphosphoglucose-collagen
-
-
-
-
lysyl hydroxylase
-
-
lysyl hydroxylase 3
PLOD3
-
-
UDP-glucose-collagen glucosyltransferase
-
-
-
-
UDP-glucose:galactosylhydroxylysine-collagen glucosyltransferase
-
-
-
-
uridine diphosphoglucose-collagen glucosyltransferase
-
-
-
-
additional information
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
UDP-alpha-D-glucose + [procollagen]-(5R)-5-O-(beta-D-galactosyl)-5-hydroxy-L-lysine = UDP + [procollagen]-(5R)-5-O-[alpha-D-glucosyl-(1->2)-beta-D-galactosyl]-5-hydroxy-L-lysine
show the reaction diagram
reaction mechanism
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hexosyl group transfer
-
-
-
-
PATHWAY SOURCE
PATHWAYS
-
-
SYSTEMATIC NAME
IUBMB Comments
UDP-glucose:(2S,5R)-5-O-(beta-D-galactosyl)-5-hydroxy-L-lysine-[procollagen] D-glucosyltransferase
Involved in the synthesis of carbohydrate units in the complement system (cf. EC 2.4.1.50 procollagen galactosyltransferase).
CAS REGISTRY NUMBER
COMMENTARY hide
9028-08-4
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
UDP-alpha-D-glucose + [procollagen]-(5R)-5-O-(beta-D-galactosyl)-5-hydroxy-L-lysine
UDP + [procollagen]-(5R)-5-O-[alpha-D-glucosyl-(1->2)-beta-D-galactosyl]-5-hydroxy-L-lysine
show the reaction diagram
TDP-glucose + D-galactosylhydroxylysine
TDP + 1,2-D-glucosyl-D-galactosylhydroxylysine
show the reaction diagram
-
soluble enzyme, glucosylation at 60% of the rate of UDP-glucose
-
?
UDP-alpha-D-glucose + calf skin collagen
?
show the reaction diagram
-
-
-
-
?
UDP-glucose + (2S,5R)-5-O-(beta-D-galactosyl)-5-hydroxy-L-lysine-[procollagen]
UDP + (2S,5R)-5-O-[alpha-D-glucosyl-(1->2)-beta-D-galactosyl]-5-hydroxy-L-lysine-[procollagen]
show the reaction diagram
-
-
-
-
?
UDP-glucose + 5-(D-galactosyloxy)-L-lysine-procollagen
UDP + 1,2-D-glucosyl-5-D-(galactosyloxy)-L-lysine-procollagen
show the reaction diagram
UDP-glucose + calf skin gelatin
?
show the reaction diagram
-
-
-
-
?
UDP-glucose + D-galactosylhydroxylysine
UDP + 1,2-D-glucosyl-D-galactosylhydroxylysine
show the reaction diagram
UDP-glucose + fetuin minus sialic acid, galactose and N-acetylglucosamine
?
show the reaction diagram
-
7% as effective as glucose-free bovine Achilles tendon collagen
-
-
?
UDP-glucose + ichthyocol
?
show the reaction diagram
-
fish collagen prepared from carp swim bladder, ichthyocol glycopeptides prepared by collagenase digestion are better substrates than native ichthyocol, better substrate than calf skin collagen
-
-
?
UDP-glucose + transferrin minus Fe3+ and sialic acid
?
show the reaction diagram
-
7% as effective as glucose-free bovine Achilles tendon collagen
-
-
?
UDP-glucose + type VII collagen
?
show the reaction diagram
-
-
-
-
?
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
UDP-alpha-D-glucose + [procollagen]-(5R)-5-O-(beta-D-galactosyl)-5-hydroxy-L-lysine
UDP + [procollagen]-(5R)-5-O-[alpha-D-glucosyl-(1->2)-beta-D-galactosyl]-5-hydroxy-L-lysine
show the reaction diagram
-
-
-
?
UDP-glucose + (2S,5R)-5-O-(beta-D-galactosyl)-5-hydroxy-L-lysine-[procollagen]
UDP + (2S,5R)-5-O-[alpha-D-glucosyl-(1->2)-beta-D-galactosyl]-5-hydroxy-L-lysine-[procollagen]
show the reaction diagram
-
-
-
-
?
UDP-glucose + 5-(D-galactosyloxy)-L-lysine-procollagen
UDP + 1,2-D-glucosyl-5-D-(galactosyloxy)-L-lysine-procollagen
show the reaction diagram
UDP-glucose + type VII collagen
?
show the reaction diagram
-
-
-
-
?
additional information
?
-
-
there must be an additional glucosyltransferase to LH3 that is responsible for most of the collagen glucosylation in vivo
-
-
?
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Fe2+
contributes to the overall enzyme stabilization, enzymatic activity peaks at 25 microM Fe2+
Fe2+
-
-
Ni2+
-
activates, soluble enzyme
additional information
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
Acetylsalicylic acid
-
aspirin
cAMP
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4.5 mM: 26% inhibition
D-glucosamine
-
-
Mn2+
-
soluble enzyme, above 50 mM
p-chloromercuribenzoate
-
membrane-bound enzyme, 6 and 10 mM: 54% inhibition
p-hydroxymercuribenzoate
-
1 mM: complete inhibition
sucrose
-
membrane-bound enzyme, 0.42 M: 88% inhibition, also inhibits soluble enzyme
UTP
-
membrane-bound enzyme, 6 mM: complete inhibition
additional information
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
additional information
-
enzyme activity is dependent on aging of IMR-90 cells
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0021
calf skin collagen
-
-
-
0.002 - 3.8
D-galactosylhydroxylysine
0.029
TDP-glucose
-
soluble enzyme
0.005 - 0.15
UDP-glucose
additional information
additional information
-
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
0.0019
-
purified soluble enzyme
0.0073
-
purified enzyme from plasma
0.1
-
purified enzyme from blood platelets
0.33
-
GGT activity of LH3
additional information
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
6 - 6.5
-
2 pH-optima: 6-6.5 and 7.5-8, regardless of size of acceptor
6.5 - 7.5
-
soluble enzyme
6.5 - 8
-
-
7 - 8
-
membrane-bound enzyme
7.5 - 8
-
2 pH-optima: 6-6.5 and 7.5-8, regardless of size of acceptor
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5.2 - 6.5
-
about half-maximal activity at pH 5.2 and 6.5
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
distribution, not: erythrocytes
Manually annotated by BRENDA team
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fetal lung WI-38 and IMR-90 diploid fibroblasts, in cell suspension culture
Manually annotated by BRENDA team
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fetal lung WI-38 and IMR-90 diploid fibroblasts, in cell suspension culture
Manually annotated by BRENDA team
additional information
-
not in erythrocytes
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
-
5-10% of the total activity is surface-bound, the rest is of cytoplasmic origin
Manually annotated by BRENDA team
-
secretion of the enzyme from the endoplasmic reticulum to the extracellular space occurs via two secretory pathways, which generate two glycoforms. Enzyme molecules found in the cell medium are secreted through the Golgi complex, and the secretion is dependent on lysyl hydroxylase 3 glycosyltransferase activity. Enzyme found on the cell surface bypasses the Golgi complex
Manually annotated by BRENDA team
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
physiological function
organization of the extracellular matrix and cytoskeleton
malfunction
metabolism
physiological function
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
PLOD3_HUMAN
738
0
84785
Swiss-Prot
Secretory Pathway (Reliability: 2)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
85000
SDS-PAGE
180000
-
LH3 with GGT activity, gel filtration
80000
81000
-
x * 81000, LH3 with GGT activity, SDS-PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
dimer
two distinct catalytic sites at the N- and C-terminal boundaries of each monomer are separated by an accessory domain. Dimerization is essential for lysyl hydroxylase activity, whereas disruption of physiological dimers does not significantly perturb the N-terminal glycosyltransferase activities of LH3
homodimer
-
2 * 80000-85000, recombinant LH3 with GGT/GT activities, SDS-PAGE
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
-
structural domain fragment A of LH3 with GGT activity contains 2 N-glycosylation sites
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
sitting drop vapor diffusion method, crystal structures of full-length human LH3 in complex with cofactors and donor substrates provide a molecular understanding of the biochemical knowledge underlying the multiple functions of this enzyme
structures of full-length human LH3 in complex with cofactors and donor substrates. LH3 has three domains encompassing multiple catalytic sites and forms elongated tail-to-tail dimers showing two distinct catalytic sites at the N- and C-terminal boundaries of each monomer. The glycosyltransferase domain displays distinguishing features compared to other known glycosyltransferases. Known disease-related mutations map in close proximity to the catalytic sites
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
A464I
-
no effect on GGT activity
C144I
-
mutant with dramatically reduced GGT activity
D187A/D189A/D190A/D191A
-
the mutant shows unreduced lysyl hydroxylase 3 activity
D392A
-
little effect on GGT activity
D669A
-
the mutant shows no lysyl hydroxylase 3 activity
F143L
-
mutant with reduced GGT activity
L136V
-
mutant with increased GGT activity
L137V
-
mutant with increased GGT activity
L208I
-
mutant with markedly reduced GGT activity
M650L
-
no effect on GGT activity
N23S
-
lysyl hydroxylase 3 activity is reduced by nearly 50%
R729A
-
the mutant shows no lysyl hydroxylase 3 activity
additional information
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
20
-
10% loss of activity within 18 h, soluble enzyme, after DEAE-ion exchange chromatography
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
bovine serum albumin, final concentration of 0.1%, enhances stability
-
chromatography on Biogel A-1.5M decreases stability
-
extremely stable to freezing, -40°C, and thawing cycles, soluble enzyme
-
stable in crude tissue extracts
-
stable to repeated thawing and freezing, human liver or serum enzyme
-
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
-40°C, membrane-preparation, 1-2 months, stable
-
-40°C, soluble enzyme after Biogel A-1.5M chromatography, 2-4 weeks, stable
-
room temperature, soluble enzyme after DEAE-cellulose column, 18 h, 10% loss of activity
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
Ni-NTA-agarose
20fold
-
5400fold from plasma, 4400fold from blood platelets
-
80fold: soluble enzyme
-
His-tagged recombinant LH3/GGT/GT and N-terminal 30kDa fragment A of LH3 with GGT activity expressed in High Five insect cells
-
His-tagged recombinant LH3/GGT/GT protein expressed in Escherichia coli
-
solubilized with Triton X-100
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expression from HeLa cell lines and from transient HEK293 cells
overexpression in HT-1080 cells, expression of fragments in Escherichia coli
a single gene codes for LH, GGT and GT activities
-
cDNA sequence of GGT/LH3
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expressed in MDCK, COS-7 and HT-1080 cells
-
expressed in MEF cells
-
full-length LH3 and the N-terminal 30 kDa fragment A with GGT activity is cloned, sequenced and expressed in High Five insect cells
-
LH3 cDNA with GGT activity is cloned and expressed in Sf9 insect cells and in Escherichia coli XL1-Blue
-
EXPRESSION
ORGANISM
UNIPROT
LITERATURE
67% expression of LH3 in humans with epidermolysis bullosa simplex
enzyme levels are reduced in patients with recessive dystrophic epidermolysis bullosa
-
exogenous type VII collagen do not alter enzyme expression in cultured recessive dystrophic epidermolysis bullosa keratinocytes
-
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Kivirikko, K.I.; Myllyl, R.
Posttranslational enzymes in the biosynthesis of collagen: intracellular enzymes
Methods Enzymol.
82
245-304
1982
Bos taurus, Cavia porcellus, Gallus gallus, Homo sapiens, Rattus norvegicus
Manually annotated by BRENDA team
Rautavuoma, K.; Takaluoma, K.; Passoja, K.; Pirskanen, A.; Kvist, A.P.; Kivirikko, K.I.; Myllyharju, J.
Characterization of three fragments that constitute the monomers of the human lysyl hydroxylase isoenzymes 1-3: The 30-kDa N-terminal fragment is not required for lysyl hydroxylase activity
J. Biol. Chem.
277
23084-23091
2002
Homo sapiens
Manually annotated by BRENDA team
Wang, C.; Risteli, M.; Heikkinen, J.; Hussa, A.K.; Uitto, L.; Myllyla, R.
Identification of amino acids important for the catalytic activity of the collagen glucosyltransferase associated with the multifunctional lysyl hydroxylase 3 (LH3)
J. Biol. Chem.
277
18568-18573
2002
Caenorhabditis elegans, Homo sapiens
Manually annotated by BRENDA team
Carnicero, H.H.; Adamany, A.M.; Englard, S.
Collagen glucosyl- and galactosyltransferases of cultured human fetal lung fibroblasts
Arch. Biochem. Biophys.
210
678-690
1981
Homo sapiens
Manually annotated by BRENDA team
Barber, A.J.; Jamieson, G.A.
Platelet collagen adhesion characterization of collagen glucosyltransferase of plasma membranes of human blood platelets
Biochim. Biophys. Acta
252
533-545
1971
Homo sapiens
Manually annotated by BRENDA team
Leunis, J.C.; Smith, D.F.; Nwokoro, N.; Fishback, B.L.; Wu, C.; Jamieson, G.A.
The distribution of collagen:glucosyltransferase in human blood cells and plasma
Biochim. Biophys. Acta
611
79-86
1980
Homo sapiens
Manually annotated by BRENDA team
Smith, D.F.; Wu, C.; Jamieson, G.A.
Characterization of human platelet UDPglucose-collagen glucosyltransferase using a new rapid assay
Biochim. Biophys. Acta
483
263-278
1977
Homo sapiens
Manually annotated by BRENDA team
Wang, C.; Luosujrvi, H.; Heikkinen, J.; Risteli, M.; Uitto, L.; Myllyl, R.
The third activity for lysyl hydroxylase 3: galactosylation of hydroxylysyl residues in collagens in vitro
Matrix Biol.
21
559-566
2002
Caenorhabditis elegans, Homo sapiens
Manually annotated by BRENDA team
Salo, A.M.; Cox, H.; Farndon, P.; Moss, C.; Grindulis, H.; Risteli, M.; Robins, S.P.; Myllylae, R.
A connective tissue disorder caused by mutations of the lysyl hydroxylase 3 gene
Am. J. Hum. Genet.
83
495-503
2008
Homo sapiens
Manually annotated by BRENDA team
Risteli, M.; Ruotsalainen, H.; Salo, A.M.; Sormunen, R.; Sipilae, L.; Baker, N.L.; Lamande, S.R.; Vimpari-Kauppinen, L.; Myllylae, R.
Reduction of lysyl hydroxylase 3 causes deleterious changes in the deposition and organization of extracellular matrix
J. Biol. Chem.
284
28204-28211
2009
Homo sapiens (O60568), Mus musculus
Manually annotated by BRENDA team
Wang, C.; Kovanen, V.; Raudasoja, P.; Eskelinen, S.; Pospiech, H.; Myllylae, R.
The glycosyltransferase activities of lysyl hydroxylase 3 (LH3) in the extracellular space are important for cell growth and viability
J. Cell. Mol. Med.
13
508-521
2009
Homo sapiens (O60568)
Manually annotated by BRENDA team
Sricholpech, M.; Perdivara, I.; Yokoyama, M.; Nagaoka, H.; Terajima, M.; Tomer, K.B.; Yamauchi, M.
Lysyl hydroxylase 3-mediated glucosylation in type I collagen: molecular loci and biological significance
J. Biol. Chem.
287
22998-23009
2012
Homo sapiens, Mus musculus
Manually annotated by BRENDA team
Wang, C.; Ristiluoma, M.M.; Salo, A.M.; Eskelinen, S.; Myllylae, R.
Lysyl hydroxylase 3 is secreted from cells by two pathways
J. Cell. Physiol.
227
668-675
2012
Homo sapiens
Manually annotated by BRENDA team
Dayer, C.; Stamenkovic, I.
Recruitment of matrix metalloproteinase-9 (MMP-9) to the fibroblast cell surface by lysyl hydroxylase 3 (lh3) triggers transforming growth factor-beta (TGF-beta) activation and fibroblast differentiation
J. Biol. Chem.
290
13763-13778
2015
Homo sapiens
Manually annotated by BRENDA team
Watt, S.A.; Dayal, J.H.; Wright, S.; Riddle, M.; Pourreyron, C.; McMillan, J.R.; Kimble, R.M.; Prisco, M.; Gartner, U.; Warbrick, E.; McLean, W.H.; Leigh, I.M.; McGrath, J.A.; Salas-Alanis, J.C.; Tolar, J.; South, A.P.
Lysyl hydroxylase 3 localizes to epidermal basement membrane and is reduced in patients with recessive dystrophic epidermolysis bullosa
PLoS ONE
10
e0137639
2015
Homo sapiens
Manually annotated by BRENDA team
Risteli, M.; Ruotsalainen, H.; Bergmann, U.; Venkatraman Girija, U.; Wallis, R.; Myllylae, R.
Lysyl hydroxylase 3 modifies lysine residues to facilitate oligomerization of mannan-binding lectin
PLoS ONE
9
e113498
2014
Homo sapiens
Manually annotated by BRENDA team
Scietti, L.; Chiapparino, A.; De Giorgi, F.; Fumagalli, M.; Khoriauli, L.; Nergadze, S.; Basu, S.; Olieric, V.; Cucca, L.; Banushi, B.; Profumo, A.; Giulotto, E.; Gissen, P.; Forneris, F.
Molecular architecture of the multifunctional collagen lysyl hydroxylase and glycosyltransferase LH3
Nat. Commun.
9
3163
2018
Homo sapiens (O60568)
Manually annotated by BRENDA team