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Information on EC 2.1.1.37 - DNA (cytosine-5-)-methyltransferase and Organism(s) Oryza sativa and UniProt Accession Q7Y1I7

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EC Tree
     2 Transferases
         2.1 Transferring one-carbon groups
             2.1.1 Methyltransferases
                2.1.1.37 DNA (cytosine-5-)-methyltransferase
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Select one or more organisms in this record: ?
This record set is specific for:
Oryza sativa
UNIPROT: Q7Y1I7 not found.
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Word Map
The taxonomic range for the selected organisms is: Oryza sativa
The enzyme appears in selected viruses and cellular organisms
Synonyms
dnmt1, dnmt3a, dna methyltransferase, dnmt3b, dna methyltransferase 1, dnmt2, dna mtase, nsun2, dna methylase, dna methyltransferase 3a, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
DNA methyltransferase
-
DNA MTase
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C5-MTase
-
-
-
-
CMT1
Q8H854
-
cytosine 5-methyltransferase
-
-
-
-
cytosine DNA methylase
-
-
-
-
cytosine DNA methyltransferase
cytosine DNA MTase
B1Q3J6, B9FJ44, Q10C15, Q10SU5, Q8H854, Q8SBB4
-
cytosine-specific DNA methyltransferase
-
-
-
-
DCMT
-
-
-
-
deoxyribonucleate methylase
-
-
-
-
deoxyribonucleate methyltransferase
-
-
-
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deoxyribonucleic (cytosine-5-)-methyltransferase
-
-
-
-
deoxyribonucleic acid (cytosine-5-)-methyltransferase
-
-
-
-
deoxyribonucleic acid methylase
-
-
-
-
deoxyribonucleic acid methyltransferase
-
-
-
-
deoxyribonucleic acid modification methylase
-
-
-
-
deoxyribonucleic methylase
-
-
-
-
DNA 5-cytosine methylase
-
-
-
-
DNA cytosine c5 methylase
-
-
-
-
DNA cytosine methylase
-
-
-
-
DNA methylase
-
-
-
-
DNA methyltransferase
DNA MTase
-
DNA transmethylase
-
-
-
-
DNA-cytosine 5-methylase
-
-
-
-
DNA-cytosine methyltransferase
-
-
-
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EcoRI methylase
-
-
-
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methylphosphotriester-DNA methyltransferase
-
-
-
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methyltransferase, deoxyribonucleate
-
-
-
-
type II DNA methylase
-
-
-
-
additional information
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
methyl group transfer
-
-
-
-
PATHWAY SOURCE
PATHWAYS
SYSTEMATIC NAME
IUBMB Comments
S-adenosyl-L-methionine:DNA (cytosine-5-)-methyltransferase
-
CAS REGISTRY NUMBER
COMMENTARY hide
9037-42-7
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
DNA + S-adenosyl-L-methionine
DNA containing 5-methylcytosine + S-adenosyl-L-homocysteine
show the reaction diagram
poly(dG-mdC)-poly(dG-dC) + S-adenosyl-L-methionine
?
show the reaction diagram
-
-
-
?
poly(dI-mdC)-poly(dI-dC) + S-adenosyl-L-methionine
?
show the reaction diagram
-
-
-
?
DNA + S-adenosyl-L-methionine
DNA containing 5-methylcytosine + S-adenosyl-L-homocysteine
show the reaction diagram
poly(dG-mdC)-poly(dG-dC) + S-adenosyl-L-methionine
?
show the reaction diagram
-
-
-
?
poly(dI-mdC)-poly(dI-dC) + S-adenosyl-L-methionine
?
show the reaction diagram
-
-
-
?
S-adenosyl-L-methionine + DNA
S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine
show the reaction diagram
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
DNA + S-adenosyl-L-methionine
DNA containing 5-methylcytosine + S-adenosyl-L-homocysteine
show the reaction diagram
-
-
-
?
DNA + S-adenosyl-L-methionine
DNA containing 5-methylcytosine + S-adenosyl-L-homocysteine
show the reaction diagram
additional information
?
-
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
S-adenosyl-L-methionine
-
S-adenosyl-L-methionine
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
additional information
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.00263
S-adenosyl-L-methionine
pH 7.6, 25°C
0.0026 - 0.00263
S-adenosyl-L-methionine
additional information
additional information
-
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
0.0013
purified enzyme with substrate hemi-methylated DNA substrate poly(dI-mdC)–poly(dI-dC)
0.0013
purified enzyme with substrate hemi-methylated DNA substrate poly(dI-mdC)–poly(dI-dC)
additional information
-
-
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
7.6 - 8.7
-
50% of maximal activity at pH 7.6 and at pH 8.7
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
MET1-1; gene MET1-1
UniProt
Manually annotated by BRENDA team
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
only the OsMET1-1 mRNAis slightly accumulated in young leaves, in which virtually no OsMET1-2 transcripts is detectable
Manually annotated by BRENDA team
DNA MTase activity is remarkably increased during imbibing dry seeds
Manually annotated by BRENDA team
DNA MTase activity is remarkably increased during imbibing dry seeds
Manually annotated by BRENDA team
additional information
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
DNA MTase is enriched in nuclei
Manually annotated by BRENDA team
DNA MTase is enriched in nuclei
Manually annotated by BRENDA team
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
physiological function
B1Q3J6, B9FJ44, Q10C15, Q10SU5, Q8H854, Q8SBB4
MTases play a role in the epigenetic process affecting genome activity during reproductive development and stress
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
160000 - 170000
gel filtration
160000 - 170000
gel filtration
54000
-
sucrose density gradient centrifugation
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
30
-
15 min, stable
4
-
stable for 5 days
42
-
half-life: 48 s
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
-20°C, stable for more than 2 months
-
4°C, stable for 5 days
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
native enzyme from nuclear extracts from shoots of 10-day-old rice seedlings, 800fold by anion exchange and heparin affinity chromatography, and gel filtration
native enzyme from nuclear extracts from shoots of 10-day-old rice seedlings, 800fold by anion exchange and heparin affinity chromatography, and gel filtration
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
gene MET1-1, DNA and amino acid sequence determination and analysis
gene MET1-2, DNA and amino acid sequence determination and analysis
gene MET1B or MET1-2, phylogenetic analysis, microarray-based gene expression profile of all 10 MTases during 22 stages and tissues that include 14 stages of reproductive development and five vegetative tissues together with three stresses, cold, salt and dehydration stress, revealing specific windows of MTase activity during panicle and seed development, overview
B1Q3J6, B9FJ44, Q10C15, Q10SU5, Q8H854, Q8SBB4
gene OsCMT1, phylogenetic analysis, microarray-based gene expression profile of all 10 MTases during 22 stages and tissues that include 14 stages of reproductive development and five vegetative tissues together with three stresses, cold, salt and dehydration stress, revealing specific windows of MTase activity during panicle and seed development, overview
B1Q3J6, B9FJ44, Q10C15, Q10SU5, Q8H854, Q8SBB4
gene Zmt3, phylogenetic analysis, microarray-based gene expression profile of all 10 MTases during 22 stages and tissues that include 14 stages of reproductive development and five vegetative tissues together with three stresses, cold, salt and dehydration stress, revealing specific windows of MTase activity during panicle and seed development, overview
B1Q3J6, B9FJ44, Q10C15, Q10SU5, Q8H854, Q8SBB4
phylogenetic analysis, microarray-based gene expression profile of all 10 MTases during 22 stages and tissues that include 14 stages of reproductive development and five vegetative tissues together with three stresses, cold, salt and dehydration stress, revealing specific windows of MTase activity during panicle and seed development, overview
B1Q3J6, B9FJ44, Q10C15, Q10SU5, Q8H854, Q8SBB4
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Giordano, M.; Mattachini, M.E.; Cella, R.; Pedrali-Noy, G.
Purification and properties of a novel DNA methyltransferase from cultured rice cells
Biochem. Biophys. Res. Commun.
177
711-719
1991
Oryza sativa
Manually annotated by BRENDA team
Sharma, R.; Mohan Singh, R.; Malik, G.; Deveshwar, P.; Tyagi, A.; Kapoor, S.; Kapoor, M.
Rice cytosine DNA methyltransferases - gene expression profiling during reproductive development and abiotic stress
FEBS J.
276
6301-6311
2009
Oryza sativa (B1Q3J6), Oryza sativa (B9FJ44), Oryza sativa (Q10C15), Oryza sativa (Q10SU5), Oryza sativa (Q8H854), Oryza sativa (Q8SBB4), Oryza sativa
Manually annotated by BRENDA team
Teerawanichpan, P.; Krittanai, P.; Chauvatcharin, N.; Narangajavana, J.
Purification and characterization of rice DNA methyltransferase
Plant Physiol. Biochem.
47
671-680
2009
Oryza sativa (B1Q3J6), Oryza sativa (Q7Y1I7), Oryza sativa
Manually annotated by BRENDA team