Any feedback?
Please rate this page
(enzyme.php)
(0/150)

BRENDA support

BRENDA Home
show all | hide all No of entries

Information on EC 1.5.1.6 - formyltetrahydrofolate dehydrogenase and Organism(s) Rattus norvegicus and UniProt Accession P28037

for references in articles please use BRENDA:EC1.5.1.6
Please wait a moment until all data is loaded. This message will disappear when all data is loaded.
EC Tree
Specify your search results
Select one or more organisms in this record: ?
This record set is specific for:
Rattus norvegicus
UNIPROT: P28037 not found.
Show additional data
Do not include text mining results
Include (text mining) results
Include results (AMENDA + additional results, but less precise)
Word Map
The taxonomic range for the selected organisms is: Rattus norvegicus
The expected taxonomic range for this enzyme is: Eukaryota, Bacteria
Synonyms
aldh1l1, 10-formyltetrahydrofolate dehydrogenase, aldh1l2, 10-fthfdh, formyltetrahydrofolate dehydrogenase, mtfdh, 10-fdh, 10-formyl-h4folate dehydrogenase, 10-fthf dehydrogenase, n10-formyltetrahydrofolate dehydrogenase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
10-formyltetrahydrofolate dehydrogenase
-
10-FDH
-
-
-
-
10-formyl tetrahydrofolate:NADP oxidoreductase
-
-
-
-
10-formyl-H2PtGlu:NADP oxidoreductase
-
-
-
-
10-formyl-H4folate dehydrogenase
-
-
-
-
10-formyltetrahydrofolate dehydrogenase
10-FTHFDH
-
-
-
-
dehydrogenase, formyltetrahydrofolate
-
-
-
-
FBP-CI
-
-
-
-
FBP-CI proteins
-
-
-
-
folate-binding proteins, cytosol I
-
-
-
-
N10-formyltetrahydrofolate dehydrogenase
-
-
-
-
proteins, folate-binding, cytosol I
-
-
-
-
additional information
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
10-formyltetrahydrofolate + NADP+ + H2O = tetrahydrofolate + CO2 + NADPH + H+
show the reaction diagram
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
redox reaction
oxidation
reduction
-
-
-
-
PATHWAY SOURCE
PATHWAYS
SYSTEMATIC NAME
IUBMB Comments
10-formyltetrahydrofolate:NADP+ oxidoreductase
-
CAS REGISTRY NUMBER
COMMENTARY hide
37256-25-0
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
10-formyltetrahydrofolate + NADP+ + H2O
?
show the reaction diagram
the enzyme is composed of three domains and possesses three catalytic activities but has only two catalytic centers. The amino-terminal domain (residues 1-310) bears 10-formyltetrahydrofolate hydrolase activity, the carboxyl-terminal domain (residues 420-902) bears an aldehyde dehydrogenase activity, and the full-length FDH produces 10-formyltetrahydrofolate dehydrogenase activity
-
-
?
10-formyl-5,8-dideazafolate + NADP+ + H2O
5,8-dideazafolate + CO2 + NADPH + H+
show the reaction diagram
10-formyltetrahydrofolate + NADP+ + H2O
tetrahydrofolate + CO2 + NADPH + H+
show the reaction diagram
10-formyltetrahydropteroylpentaglutamate + NADP+ + H2O
tetrahydropteroylpentaglutamate + CO2 + NADPH
show the reaction diagram
10-formyltetrahydropteroylpolyglutamate + NADP+ + H2O
tetrahydropteroylpolyglutamate + CO2 + NADPH + H+
show the reaction diagram
-
-
-
-
?
ATP + formate + tetrahydrofolate
ADP + phosphate + 10-formyltetrahydrofolate
show the reaction diagram
-
-
-
-
?
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
10-formyltetrahydrofolate + NADP+ + H2O
tetrahydrofolate + CO2 + NADPH + H+
show the reaction diagram
10-formyltetrahydropteroylpentaglutamate + NADP+ + H2O
tetrahydropteroylpentaglutamate + CO2 + NADPH
show the reaction diagram
additional information
?
-
-
enzyme functions not as an aldehyde dehydrogenase in vivo, 10-formyltetrahydrofolate hydrolase activity is of no physiological significance, disulfiram may inhibit enzyme activity and probably perturb hepatic folate metabolism in vivo
-
-
?
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
10-formyltetrahydrofolate
5-formyltetrahydrofolate
-
covalent linkage of 5-formyltetrahydrofolate to enzyme, 2 mol bound per mol of enzyme monomer, it is a minor form of the folate coenzymes and arises from 10-formyltetrahydrofolate
folate
NADP+
tetrahydrofolate
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
5,10-dideazatetrahydrofolate
-
0.4 mM, 98% inhibition, folate analog
5-formyltetrahydrofolate
-
covalent attachment completely inhibits
N-ethylmaleimide
-
1 mM or 10 mM, complete inhibition
propanal
-
FDH activity decreases with increasing concentrations, competes with 10-formyltetrahydrofolate for NADP+-dependent oxidation
tetrahydrofolate
tetrahydropteroylpolyglutamate
-
potent product inhibitor
Trypsin
-
additional information
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2-mercaptoethanol
NADPH
-
activates at concentrations and in ratio with NADP+ consistent with those in rat liver in vivo, activation is associated with higher Ki-value for tetrahydrofolate
additional information
-
not activated by methionine or ethionine
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.0032
10-formyl-5,8-dideazafolate
-
-
0.0045 - 0.02
10-formyltetrahydrofolate
0.00086 - 0.001
NADP+
Ki VALUE [mM]
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.048
5,10-dideazatetrahydrofolate
-
-
0.007
tetrahydrofolate
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
0.094
-
recombinant FDH, 10-formyltetrahydrofolate as substrate
0.144
-
with 10-formyl-5,8-dideazafolate as substrate
0.26
-
with 10-formyltetrahydrofolate as substrate
0.7 - 0.8
-
at 25°C
additional information
-
-
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
37
-
maximal catalytic capacity at
additional information
pI VALUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
7
two-dimensional gel electrophoresis
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
much lower levels than in liver, preferentially localized in Müller cells, FDH levels in human retina are higher than in rat retina, folate levels in human retina are 14% of those in rat retina
Manually annotated by BRENDA team
-
less activity
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
additional information
-
not detected in nucleus, lysosomes or peroxisomes
-
Manually annotated by BRENDA team
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
AL1L1_RAT
902
0
98874
Swiss-Prot
other Location (Reliability: 2)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
100000
x * 100000, two-dimensional gel electrophoresis
99700
x * 99700, predicted
106000
-
4 * 106000, SDS-PAGE
108000
-
4 * 108000, SDS-PAGE
390000
-
gel filtration
393200
-
C707A mutant FDH, molecular size detector employing laser-light scattering methodology
398800
-
wild-type FDH, molecular size detector employing laser-light scattering methodology
413000
-
gel filtration, sedimentation analysis
450000
-
nondenaturing PAGE
90000
-
SDS-PAGE
94000
-
x * 94000, SDS-PAGE
96000
-
x * 96000, SDS-PAGE
99000
99015
-
x * 99015, SDS-PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
homotetramer
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
-
FDH requires posttranslational modification to become a functional enzyme (4'-phosphopantetheine prosthetic group)
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
crystal structure of the hydrolase domain of FDH, solved to 2.3 A resolution
C-terminal domain of FDH and its complexes with oxidized and reduced forms of NADP+ are crystallized using the hanging drop vapour diffusion method with 1.4-1.5 M ammonium sulfate and 0.1 M Tris-HCl, pH 7.0-7.5
-
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
C152A
95% of the activity with wild-type enzyme
C17A
94% of the activity with wild-type enzyme
C191A
96% of the activity with wild-type enzyme
C238A
102% of the activity with wild-type enzyme
C86A
110% of the activity with wild-type enzyme
D399A
90% of the dehydrogenase activity of the wild-type enzyme
E398A
90% of the dehydrogenase activity of the wild-type enzyme
F384_V405del
no dehydrogenase activity
G397A
as active as wild-type enzyme
K394A
75% of the dehydrogenase activity of the wild-type enzyme
K394A/L395A/R396A/G397A/E398A/D399A
no dehydrogenase activity
K394_D399del
no dehydrogenase activity
L395A
80% of the dehydrogenase activity of the wild-type enzyme
R396A
as active as wild-type enzyme
C707A
D142A
-
mutant with a complete loss of 10-formyltetrahydrofolate dehydrogenase and hydrolase activity, aldehyde dehydrogenase activity is similar to wild-type FDH
H106A
-
insoluble recombinant protein
H106K
-
mutant with a complete loss of 10-formyltetrahydrofolate dehydrogenase and hydrolase activity, aldehyde dehydrogenase activity is similar to wild-type FDH
S354A
-
no dehydrogenase activity
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
in general activity is labile
-
OXIDATION STABILITY
ORGANISM
UNIPROT
LITERATURE
prone to oxidative inactivation, but may be partially reactivated by incubation with 100 mM 2-mercaptoethanol or 100 mM dithiothreitol
-
392342
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
-20°C, stable for several months
4°C, stable for 2 weeks
-20°C, 20% glycerol, over 12 months, no loss of activity
-
-70°C, 0.05 M phosphate buffer, pH 7.2, 50%-saturated (NH4)2SO4, 20% glycerol, 1 mM EDTA, 0.1 mM dithioerythritol, 0.01 mM phenylmethanesulfonyl fluoride, several months, stable
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
intermediate domain and its mutants
250fold purification
-
5-fTHFSepharose column chromatography, Sephacryl S-300 gel filtration, and MonoQ column chromatography
-
co-purification with carbamoyl-phosphate synthetase 1 and betaine homocysteine S-methyltransferase using Kunitz-type soybean trypsin inhibitor-coupled Sepharose CL-4B column chromatography, Sephacryl S-200 gel filtration, and Superdex 200 gel filtration
-
free of 10-formyltetrahydrofolate hydrolase activity
-
Kunitz-type soybean trypsin inhibitor-coupled Sepharose CL-4B column chromatography
-
Ni-NTA column chromatography
-
purification of a C707A mutant of FDH
-
purification of N-terminal domain mutants and of a D124A mutant of FDH
-
purification of N-terminal domain mutants and of a H106K mutant of FDH
-
purification of recombinant 310 amino acid residue N-terminal domain
-
purification of recombinant liver FDH
-
separated from 10-formyltetrahydrofolate hydrolase, dehydrogenase and hydrolase are closely related and separately compartmentalized enzymes
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
clone expressed in insect cells has both dehydrogenase and hydrolase activity and exhibits almost identical kinetic parameters to the native rat liver enzyme
-
cloning of the cDNA encoding FDH
-
expressed in Escherichia coli
-
expressed in Escherichia coli and Sf9 insect cells
-
expression of D124A mutant of FDH and N-terminal domain mutants in Sf9 insect cells, using a baculovirus expression system
-
expression of FDH and its N-terminal and C-terminal domains in insect cells, using a baculovirus expression system, expression of FDH and of its 310 amino acid residue N-terminal domain in Escherichia coli BL21 using the pRSET vector, full-length enzyme expressed in Escherichia coli is nonsoluble, because of the large size of its monomer and uncorrect folding in prokaryotic cells
-
expression of FDH cDNA, subcloned in the pVL 1393 baculovirus vector, in Sf9 insect cells, using the MaxBac expression system
-
expression of FDH in insect cells using the pVL 1393 baculovirus expression vector
-
expression of H106K mutant of FDH in insect cells SF9, using a baculovirus expression system, and of N-terminal domain mutants in Escherichia coli BL 21
-
FDH is cloned
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
medicine
-
feeding of ethanol decreases hepatic enzyme activity, decrease occurs irrespective of folate status
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Kutzbach, C.; Stokstad, E.L.R.
10-Formyl tetrahydrofolate:NADP oxidoreductase
Methods Enzymol.
18B
793-798
1971
Gallus gallus, Rattus norvegicus, Sus scrofa
-
Manually annotated by BRENDA team
Case, G.L.; Kaisaki, P.J.; Steele, R.D.
Resolution of rat liver 10-formyltetrahydrofolate dehydrogenase/hydrolase activities
J. Biol. Chem.
263
10204-10207
1988
Rattus norvegicus
Manually annotated by BRENDA team
Min, H.; Shane, B.; Stokstad, E.L.R.
Identification of 10-formyltetrahydrofolate dehydrogenase-hydrolase as a major folate binding protein in liver cytosol
Biochim. Biophys. Acta
967
348-353
1988
Rattus norvegicus, Sus scrofa
Manually annotated by BRENDA team
Johlin, F.C.; Swain, E.; Smith, C.; Tephly, T.R.
Studies on the mechanism of methanol poisoning: purification and comparison of rat and human liver 10-formyltetrahydrofolate dehydrogenase
Mol. Pharmacol.
35
745-750
1989
Homo sapiens, Rattus norvegicus
Manually annotated by BRENDA team
Scrutton, M.C.; Beis, I.
Inhibitory effects of histidine and their reversal. The roles of pyruvate carboxylase and N10-formyltetrahydrofolate dehydrogenase
Biochem. J.
177
833-846
1979
Rattus norvegicus
Manually annotated by BRENDA team
Cook, R.J.; Wagner, C.
Enzymatic activities of rat liver cytosol 10-formyltetrahydrofolate dehydrogenase
Arch. Biochem. Biophys.
321
336-344
1995
Oryctolagus cuniculus, Rattus norvegicus
Manually annotated by BRENDA team
Wagner, C.; Briggs, W.T.; Horne, D.H.; Cook, R.J.
10-Formyltetrahydrofolate dehydrogenase: Identification of the natural folate ligand, covalent labeling, and partial tryptic digestion
Arch. Biochem. Biophys.
316
141-147
1995
Rattus norvegicus, Sus scrofa
Manually annotated by BRENDA team
Krupenko, S.A.; Wagner, C.
Aspartate 142 is involved in both hydrolase and dehydrogenase catalytic centers of 10-formyltetrahydrofolate dehydrogenase
J. Biol. Chem.
274
35777-35784
1999
Rattus norvegicus
Manually annotated by BRENDA team
Krupenko, S.A.; Vlasov, A.P.; Wagner, C.
On the role of conserved histidine 106 in 10-formyltetrahydrofolate dehydrogenase catalysis
J. Biol. Chem.
276
24030-24037
2001
Rattus norvegicus
Manually annotated by BRENDA team
Krupenko, S.A.; Wagner, C.
Overexpression of functional hydrolase domain of rat liver 10-formyltetrahydrofolate dehydrogenase in Escherichia coli
Protein Expr. Purif.
14
146-152
1998
Rattus norvegicus
Manually annotated by BRENDA team
Krupenko, S.A.; Oleinik, N.V.
10-Formyltetrahydrofolate dehydrogenase, one of the major folate enzymes, is down-regulated in tumor tissues and possesses suppressor effects on cancer cells
Cell Growth Differ.
13
227-236
2002
Homo sapiens, Rattus norvegicus
Manually annotated by BRENDA team
Krupenko, S.A.; Wagner, C.; Cook, R.J.
Recombinant 10-formyltetrahydrofolate dehydrogenase catalyses both dehydrogenase and hydrolase reactions utilizing the synthetic substrate 10-formyl-5,8-dideazafolate
Biochem. J.
306
651-655
1995
Rattus norvegicus
-
Manually annotated by BRENDA team
Kim, S.; Park, G.H.; Joo, W.A.; Paik, W.K.; Cook, R.J.; Williams, K.R.
Identification of protein-arginine N-methyltransferase as 10-formyltetrahydrofolate dehydrogenase
J. Biol. Chem.
273
27374-27382
1998
Rattus norvegicus
Manually annotated by BRENDA team
Krupenko, S.A.; Wagner, C.; Cook, R.J.
Cysteine 707 is involved in the dehydrogenase active site of rat 10-formyltetrahydrofolate dehydrogenase
J. Biol. Chem.
270
519-522
1995
Rattus norvegicus
Manually annotated by BRENDA team
Martinasevic, M.K.; Green, M.D.; Baron, J.; Tephly, T.R.
Folate and 10-formyltetrahydrofolate dehydrogenase in human and rat retina: Relation to methanol toxicity
Toxicol. Appl. Pharmacol.
141
373-381
1996
Homo sapiens, Rattus norvegicus
Manually annotated by BRENDA team
Chumanevich, A.A.; Krupenko, S.A.; Davies, C.
The crystal structure of the hydrolase domain of 10-formyltetrahydrofolate dehydrogenase: mechanism of hydrolysis and its interplay with the dehydrogenase domain
J. Biol. Chem.
279
14355-14364
2004
Rattus norvegicus (P28037)
Manually annotated by BRENDA team
Reuland, S.N.; Vlasov, A.P.; Krupenko, S.A.
Disruption of a calmodulin central helix-like region of 10-formyltetrahydrofolate dehydrogenase impairs its dehydrogenase activity by uncoupling the functional domains
J. Biol. Chem.
278
22894-22900
2003
Rattus norvegicus (P28037)
Manually annotated by BRENDA team
Min, H.; Im, E.S.; Seo, J.S.; Mun, J.A.; Burri, B.J.
Effects of chronic ethanol ingestion and folate deficiency on the activity of 10-formyltetrahydrofolate dehydrogenase in rat liver
Alcohol. Clin. Exp. Res.
29
2188-2193
2005
Rattus norvegicus
Manually annotated by BRENDA team
Kim, H.S.; Kim, J.M.; Roh, K.B.; Lee, H.H.; Kim, S.J.; Shin, Y.H.; Lee, B.L.
Rat liver 10-formyltetrahydrofolate dehydrogenase, carbamoyl phosphate synthetase 1 and betaine homocysteine S-methytransferase were co-purified on Kunitz-type soybean trypsin inhibitor-coupled sepharose CL-4B
J. Biochem. Mol. Biol.
40
604-609
2007
Rattus norvegicus
Manually annotated by BRENDA team
Tsybovsky, Y.; Donato, H.; Krupenko, N.I.; Davies, C.; Krupenko, S.A.
Crystal structures of the carboxyl terminal domain of rat 10-formyltetrahydrofolate dehydrogenase: implications for the catalytic mechanism of aldehyde dehydrogenases
Biochemistry
46
2917-2929
2007
Rattus norvegicus
Manually annotated by BRENDA team
Donato, H.; Krupenko, N.I.; Tsybovsky, Y.; Krupenko, S.A.
10-formyltetrahydrofolate dehydrogenase requires a 4-phosphopantetheine prosthetic group for catalysis
J. Biol. Chem.
282
34159-34166
2007
Rattus norvegicus
Manually annotated by BRENDA team
McNeil, C.J.; Hay, S.M.; Rucklidge, G.J.; Reid, M.; Duncan, G.; Maloney, C.A.; Rees, W.D.
Disruption of lipid metabolism in the liver of the pregnant rat fed folate-deficient and methyl donor-deficient diets
Br. J. Nutr.
99
262-271
2008
Rattus norvegicus (P28037)
Manually annotated by BRENDA team
Tsybovsky, Y.; Malakhau, Y.; Strickland, K.C.; Krupenko, S.A.
The mechanism of discrimination between oxidized and reduced coenzyme in the aldehyde dehydrogenase domain of Aldh1l1
Chem. Biol. Interact.
202
62-69
2013
Rattus norvegicus
Manually annotated by BRENDA team