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Information on EC 1.14.15.30 - 3-ketosteroid 9alpha-monooxygenase and Organism(s) Mycobacterium tuberculosis and UniProt Accession P71875

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IUBMB Comments
The enzyme is involved in the cholesterol degradation pathway of several bacterial pathogens, such as Mycobacterium tuberculosis. It forms a two-component system with a ferredoxin reductase (KshB). The enzyme contains a Rieske-type iron-sulfur center and non-heme iron. The product of the enzyme is unstable, and spontaneously converts to 3-hydroxy-9,10-seconandrost-1,3,5(10)-triene-9,17-dione.
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This record set is specific for:
Mycobacterium tuberculosis
UNIPROT: P71875
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Word Map
The taxonomic range for the selected organisms is: Mycobacterium tuberculosis
The expected taxonomic range for this enzyme is: Bacteria, Archaea
Reaction Schemes
Synonyms
ksha1, ksha2, kshab, ksha5, ksha3, 3-ketosteroid-9alpha-hydroxylase, 3-ketosteroid 9-alpha-hydroxylase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
3-ketosteroid 9-alpha-hydroxylase
-
3-ketosteroid 9alpha-hydroxylase
-
3-ketosteroid 9alpha-hydroxylase
KSH
-
3-ketosteroid 9alpha-hydroxylase is comprised of KshA (oxygenase) and KshB (oxygenase-reductase)
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
androsta-1,4-diene-3,17-dione + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2 = 9alpha-hydroxyandrosta-1,4-diene-3,17-dione + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
SYSTEMATIC NAME
IUBMB Comments
androsta-1,4-diene-3,17-dione,[reduced ferredoxin]:oxygen oxidoreductase (9alpha-hydroxylating)
The enzyme is involved in the cholesterol degradation pathway of several bacterial pathogens, such as Mycobacterium tuberculosis. It forms a two-component system with a ferredoxin reductase (KshB). The enzyme contains a Rieske-type iron-sulfur center and non-heme iron. The product of the enzyme is unstable, and spontaneously converts to 3-hydroxy-9,10-seconandrost-1,3,5(10)-triene-9,17-dione.
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
1,4-androstadiene-3,17-dione + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-1,4-androstadiene-3,17-dione + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
1,4-androstadiene-3,17-dione + 2 reduced ferredoxin [iron-sulfur] cluster + O2
9alpha-hydroxy-1,4-androstadiene-3,17-dione + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
3-oxo-23,24-bisnorcholest-4-en-22-oic acid + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-3-oxo-23,24-bisnorcholest-4-en-22-oic acid + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
3-oxo-23,24-bisnorcholest-4-en-22-oyl-CoA + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-3-oxo-23,24-bisnorcholest-4-en-22-oyl-CoA + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate-CoA + reduced ferredoxin [iron-sulfur] cluster + H+ + O2
?
show the reaction diagram
-
-
-
r
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oyl-CoA + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-3-oxo-23,24-bisnorcholesta-1,4-dien-22-oyl-CoA + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
4-androstene-3,17-dione + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-4-androstene-3,17-dione + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
4-androstene-3,17-dione + O2 + NADH + H+
9alpha-hydroxy-4-androstene-3,17-dione + H2O + NAD+
show the reaction diagram
-
-
-
?
androsta-1,4-diene-3,17-dione + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxyandrosta-1,4-diene-3,17-dione + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
3-oxo-23,24-bisnorcholest-4-en-22-oic acid + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-3-oxo-23,24-bisnorcholest-4-en-22-oic acid + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
3-oxo-23,24-bisnorcholest-4-en-22-oyl-CoA + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-3-oxo-23,24-bisnorcholest-4-en-22-oyl-CoA + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate-CoA + reduced ferredoxin [iron-sulfur] cluster + H+ + O2
?
show the reaction diagram
-
-
-
r
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oyl-CoA + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-3-oxo-23,24-bisnorcholesta-1,4-dien-22-oyl-CoA + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
4-androstene-3,17-dione + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-4-androstene-3,17-dione + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
4-androstene-3,17-dione + O2 + NADH + H+
? + H2O + NAD+
show the reaction diagram
-
-
-
?
5alpha-androstane-3,17-dione + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-5alpha-androstane-3,17-dione + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
-
?
androsta-1,4-diene-3,17-dione + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxyandrosta-1,4-diene-3,17-dione + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
1,4-androstadiene-3,17-dione + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-1,4-androstadiene-3,17-dione + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
4-androstene-3,17-dione + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-4-androstene-3,17-dione + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
androsta-1,4-diene-3,17-dione + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxyandrosta-1,4-diene-3,17-dione + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
3-oxo-23,24-bisnorcholest-4-en-22-oyl-CoA + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-3-oxo-23,24-bisnorcholest-4-en-22-oyl-CoA + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oyl-CoA + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ + O2
9alpha-hydroxy-3-oxo-23,24-bisnorcholesta-1,4-dien-22-oyl-CoA + 2 oxidized ferredoxin [iron-sulfur] cluster + H2O
show the reaction diagram
-
-
-
?
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
FAD
flavin co-factor of the ferredoxin reductase component KshB
Fe-S center
Rieske-type Fe-S cluster, Rieske monooxygenase
[2Fe-2S]-center
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.11
1,4-androstadiene-3,17-dione
in 0.1 M potassium phosphate, pH 7.0, at 25°C
0.07
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate
pH 7.0, 22°C, KshAB
0.017
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate-CoA
pH 7.0, 22°C, KshAB
0.003
3-oxo-23,24-bisnorcholesta-4-ene-22-oate
pH 7.0, 22°C, KshAB
0.0068
3-oxo-23,24-bisnorcholesta-4-ene-22-oyl-CoA
pH 7.0, 22°C, KshAB
0.024
4-androstene-3,17-dione
0.1 - 1
androsta-1,4-diene-3,17-dione
pH 7.0, 22°C, KshAB
1.2
O2
in the presence of 1,4-androstadiene-3,17-dione, Km above 1.2 mM, in 0.1 M potassium phosphate, pH 7.0, at 25°C
0.003
3-oxo-23,24-bisnorchol-4-en-22-oic acid
in 0.1 M potassium phosphate, pH 7.0, at 22°C
0.0068
3-oxo-23,24-bisnorchol-4-en-22-oic acid-CoA
in 0.1 M potassium phosphate, pH 7.0, at 22°C
0.07
3-oxo-23,24-bisnorchola-1,4-dien-22-oic acid
in 0.1 M potassium phosphate, pH 7.0, at 22°C
0.017
3-oxo-23,24-bisnorchola-1,4-dien-22-oic acid-CoA
in 0.1 M potassium phosphate, pH 7.0, at 22°C
0.07
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate
pH 7.0, 22°C, KshAB
0.017
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate-CoA
pH 7.0, 22°C, KshAB
0.003
3-oxo-23,24-bisnorcholesta-4-ene-22-oate
pH 7.0, 22°C, KshAB
0.0068
3-oxo-23,24-bisnorcholesta-4-ene-22-oyl-CoA
pH 7.0, 22°C, KshAB
0.024
4-androstene-3,17-dione
0.1 - 1
androsta-1,4-diene-3,17-dione
0.09
O2
apparent Km value, in the presence of 3-oxo-23,24-bisnorchola-1,4-dien-22-oic acid-CoA, in 0.1 M potassium phosphate, pH 7.0, at 22°C
additional information
additional information
-
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.8
1,4-androstadiene-3,17-dione
in 0.1 M potassium phosphate, pH 7.0, at 25°C
0.25
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate
pH 7.0, 22°C, KshAB
2.7
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate-CoA
pH 7.0, 22°C, KshAB
0.08
3-oxo-23,24-bisnorcholesta-4-ene-22-oate
pH 7.0, 22°C, KshAB
0.61
3-oxo-23,24-bisnorcholesta-4-ene-22-oyl-CoA
pH 7.0, 22°C, KshAB
0.07
4-androstene-3,17-dione
0.8
androsta-1,4-diene-3,17-dione
pH 7.0, 22°C, KshAB
7
O2
in the presence of 1,4-androstadiene-3,17-dione, kcat above 7 1/sec, in 0.1 M potassium phosphate, pH 7.0, at 25°C
0.08
3-oxo-23,24-bisnorchol-4-en-22-oic acid
in 0.1 M potassium phosphate, pH 7.0, at 22°C
0.61
3-oxo-23,24-bisnorchol-4-en-22-oic acid-CoA
in 0.1 M potassium phosphate, pH 7.0, at 22°C
0.25
3-oxo-23,24-bisnorchola-1,4-dien-22-oic acid
in 0.1 M potassium phosphate, pH 7.0, at 22°C
2.7
3-oxo-23,24-bisnorchola-1,4-dien-22-oic acid-CoA
in 0.1 M potassium phosphate, pH 7.0, at 22°C
0.25
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate
pH 7.0, 22°C, KshAB
2.7
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate-CoA
pH 7.0, 22°C, KshAB
0.08
3-oxo-23,24-bisnorcholesta-4-ene-22-oate
pH 7.0, 22°C, KshAB
0.61
3-oxo-23,24-bisnorcholesta-4-ene-22-oyl-CoA
pH 7.0, 22°C, KshAB
0.07
4-androstene-3,17-dione
0.8
androsta-1,4-diene-3,17-dione
2.5
O2
apparent Km value, in the presence of 3-oxo-23,24-bisnorchola-1,4-dien-22-oic acid-CoA, in 0.1 M potassium phosphate, pH 7.0, at 22°C
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
7.6
1,4-androstadiene-3,17-dione
in 0.1 M potassium phosphate, pH 7.0, at 25°C
3.57
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate
pH 7.0, 22°C, KshAB
158.8
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate-CoA
pH 7.0, 22°C, KshAB
26.67
3-oxo-23,24-bisnorcholesta-4-ene-22-oate
pH 7.0, 22°C, KshAB
89.71
3-oxo-23,24-bisnorcholesta-4-ene-22-oyl-CoA
pH 7.0, 22°C, KshAB
2.917 - 3
4-androstene-3,17-dione
7.27
androsta-1,4-diene-3,17-dione
pH 7.0, 22°C, KshAB
2.45
O2
in the presence of 1,4-androstadiene-3,17-dione, in 0.1 M potassium phosphate, pH 7.0, at 25°C
30
3-oxo-23,24-bisnorchol-4-en-22-oic acid
in 0.1 M potassium phosphate, pH 7.0, at 22°C
90
3-oxo-23,24-bisnorchol-4-en-22-oic acid-CoA
in 0.1 M potassium phosphate, pH 7.0, at 22°C
3.5
3-oxo-23,24-bisnorchola-1,4-dien-22-oic acid
in 0.1 M potassium phosphate, pH 7.0, at 22°C
160
3-oxo-23,24-bisnorchola-1,4-dien-22-oic acid-CoA
in 0.1 M potassium phosphate, pH 7.0, at 22°C
3.57
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate
pH 7.0, 22°C, KshAB
158.8
3-oxo-23,24-bisnorcholesta-1,4-dien-22-oate-CoA
pH 7.0, 22°C, KshAB
26.67
3-oxo-23,24-bisnorcholesta-4-ene-22-oate
pH 7.0, 22°C, KshAB
89.71
3-oxo-23,24-bisnorcholesta-4-ene-22-oyl-CoA
pH 7.0, 22°C, KshAB
2.917 - 3
4-androstene-3,17-dione
7.27 - 7.6
androsta-1,4-diene-3,17-dione
29
O2
apparent Km value, in the presence of 3-oxo-23,24-bisnorchola-1,4-dien-22-oic acid-CoA, in 0.1 M potassium phosphate, pH 7.0, at 22°C
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
evolution
KSH is classified as a group I RO in this classification system. Group I contains a broad range of mono- and dioxygenases with low amino acid sequence similarity and various protein sizes. The oxygenases are alpha-monomers. KshA contains a Rieske domain, coordinating the Rieske Fe2-S2 cluster, and a catalytic domain with the typical helix-Grip fold, which is part of the StAR (steroidogenic acute regulatory protein) related lipid transfer (START) domain superfamily. The catalytic domain is composed of a beta-sheet flanked by alpha-helices
malfunction
deletion of KSH activity in sterol degrading bacteria results in blockage of steroid ring opening and is used to produce valuable C19-steroids such as 4-androstene-3,17-dione and 1,4-androstadiene-3,17-dione
physiological function
malfunction
-
DELTAkshA and DELTAkshB deletion mutants are unable to use cholesterol and 4-androstene-3,17-dione as primary carbon and energy sources and are unable to metabolize 5alpha-androstane-3,17-dione. The deletion of either of these genes leads to rapid death of the microorganism in murine infection models and in macrophages
physiological function
additional information
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
component KshA, sitting drop vapor diffusion method, using 1.1 M sodium malonate, 0.1 M HEPES, pH 7.0, and 0.5% (v/v) Jeffamine M600
purified recombinant enzyme in complex with substrate androsta-1,4-diene-3,17-dione, using 500 mM NaH2PO4, 125 mM K2HPO4, 4% PEG 1000, 20 mM Tris, 100 mM phosphate-citrate, pH 4.2, X-ray diffraction structure determination and analysis at 2.46-2.52 A resolution
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
Ni2+-NTA agarose column chromatography and Source15Q column chromatography
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Escherichia coli BL21(DE3) cells
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
drug development
the enzyme can be a target for inhibition in treatment of tuberculosis
medicine
KSH inhibitory compounds may find application in combatting tuberculosis
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Hu, Y.; Van Der Geize, R.; Besra, G.; Gurcha, S.; Liu, A.; Rohde, M.; Singh, M.; Coates, A.
3-Ketosteroid 9alpha-hydroxylase is an essential factor in the pathogenesis of Mycobacterium tuberculosis
Mol. Microbiol.
75
107-121
2010
Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv
Manually annotated by BRENDA team
Capyk, J.; DAngelo, I.; Strynadka, N.; Eltis, L.
Characterization of 3-ketosteroid 9alpha-hydroxylase, a Rieske oxygenase in the cholesterol degradation pathway of Mycobacterium tuberculosis
J. Biol. Chem.
284
9937-9946
2009
Mycobacterium tuberculosis (P71875), Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv (P71875)
Manually annotated by BRENDA team
Capyk, J.; Casabon, I.; Gruninger, R.; Strynadka, N.; Eltis, L.
Activity of 3-ketosteroid 9alpha-hydroxylase (KshAB) indicates cholesterol side chain and ring degradation occur simultaneously in Mycobacterium tuberculosis
J. Biol. Chem.
286
40717-40724
2011
Mycobacterium tuberculosis, Mycobacterium tuberculosis (P71875), Mycobacterium tuberculosis (P9WJ93), Mycobacterium tuberculosis H37Rv (P71875), Mycobacterium tuberculosis H37Rv (P9WJ93)
Manually annotated by BRENDA team
Petrusma, M.; van der Geize, R.; Dijkhuizen, L.
3-Ketosteroid 9alpha-hydroxylase enzymes Rieske non-heme monooxygenases essential for bacterial steroid degradation
Antonie van Leeuwenhoek
106
157-172
2014
Mycobacterium tuberculosis (P71875), Mycobacterium tuberculosis H37Rv (P71875), Mycolicibacterium smegmatis, Mycolicibacterium smegmatis mc2 155, Rhodococcus erythropolis, Rhodococcus erythropolis SQ1, Rhodococcus jostii, Rhodococcus jostii (Q0RXD9), Rhodococcus jostii (Q0S812), Rhodococcus rhodochrous, Rhodococcus rhodochrous DSM 43269
Manually annotated by BRENDA team
Penfield, J.S.; Worrall, L.J.; Strynadka, N.C.; Eltis, L.D.
Substrate specificities and conformational flexibility of 3-ketosteroid 9alpha-hydroxylases
J. Biol. Chem.
289
25523-25536
2014
Mycobacterium tuberculosis (P71875), Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv (P71875), Rhodococcus rhodochrous (F1CMX0), Rhodococcus rhodochrous (F1CMY8), Rhodococcus rhodochrous DSM 43269 (F1CMX0), Rhodococcus rhodochrous DSM 43269 (F1CMY8), Rhodococcus rhodochrous DSM 43269
Manually annotated by BRENDA team