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Information on EC 1.1.3.4 - glucose oxidase and Organism(s) Penicillium amagasakiense and UniProt Accession P81156

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     1 Oxidoreductases
         1.1 Acting on the CH-OH group of donors
             1.1.3 With oxygen as acceptor
                1.1.3.4 glucose oxidase
IUBMB Comments
A flavoprotein (FAD).
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Select one or more organisms in this record: ?
This record set is specific for:
Penicillium amagasakiense
UNIPROT: P81156
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The taxonomic range for the selected organisms is: Penicillium amagasakiense
The expected taxonomic range for this enzyme is: Eukaryota, Bacteria
Synonyms
glucose oxidase, d-glucose oxidase, microcid, goxp5, ygoxpenag, cngoxa, beta-d-glucose oxidase, notatin, glucose aerodehydrogenase, beta-d-glucose oxygen 1-oxidoreductase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
beta-D-glucose oxidase
-
-
-
-
beta-D-glucose:oxygen 1-oxido-reductase
-
-
-
-
beta-D-glucose:oxygen 1-oxidoreductase
-
-
beta-D-glucose:quinone oxidoreductase
-
-
-
-
corylophyline
-
-
-
-
D-glucose oxidase
-
-
-
-
D-glucose-1-oxidase
-
-
-
-
deoxin-1
-
-
-
-
glucose aerodehydrogenase
-
-
-
-
glucose oxyhydrase
-
-
-
-
GOD
-
-
-
-
microcid
-
-
-
-
notatin
-
-
-
-
oxidase, glucose
-
-
-
-
penatin
-
-
-
-
yGOXpenag
-
recombinant enzyme
REACTION
REACTION DIAGRAM
COMMENTARY hide
ORGANISM
UNIPROT
LITERATURE
beta-D-glucose + O2 = D-glucono-1,5-lactone + H2O2
show the reaction diagram
stereochemistry
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
redox reaction
-
-
-
-
oxidation
-
-
-
-
reduction
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
beta-D-glucose:oxygen 1-oxidoreductase
A flavoprotein (FAD).
CAS REGISTRY NUMBER
COMMENTARY hide
9001-37-0
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
beta-D-glucose + O2
D-glucono-1,5-lactone + H2O2
show the reaction diagram
2-deoxy-D-glucose + O2 + H2O
2-deoxy-D-glucono-1,5-lactone + H2O2
show the reaction diagram
6-deoxy-6-fluoro-D-glucose + O2 + H2O
6-deoxy-6-fluoro-D-glucono-1,5-lactone + H2O2
show the reaction diagram
-
3% relative activity to beta-D-glucose, when determined with an unspecified enzyme at 0.5 M substrate concentration
-
?
beta-D-glucose + ferrocinium-methanol
?
show the reaction diagram
-
-
-
-
?
beta-D-glucose + O2
D-glucono-1,5-lactone + H2O2
show the reaction diagram
-
-
-
-
?
beta-D-glucose + O2 + H2O
D-glucono-1,5-lactone + H2O2
show the reaction diagram
D-galactose + O2 + H2O
? + H2O2
show the reaction diagram
-
recombinant enzyme
-
?
D-glucosone + O2 + H2O
? + H2O2
show the reaction diagram
-
30% relative activity to beta-D-glucose
-
?
D-xylose + O2 + H2O
?
show the reaction diagram
-
recombinant enzyme
-
?
mannose + O2 + H2O
? + H2O2
show the reaction diagram
-
recombinant enzyme
-
?
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
beta-D-glucose + O2
D-glucono-1,5-lactone + H2O2
show the reaction diagram
-
-
-
?
beta-D-glucose + O2
D-glucono-1,5-lactone + H2O2
show the reaction diagram
-
-
-
-
?
beta-D-glucose + O2 + H2O
D-glucono-1,5-lactone + H2O2
show the reaction diagram
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
8-hydroxyquinoline
-
11% inhibition at 10 mM
Br-
-
competitive, at low pH
Cl-
-
competitive, at low pH
dimedone
-
partial
F-
-
competitive, at low pH
hydrazine
-
partial
hydroxylamine
-
partial
phenylhydrazine
-
partial
Semicarbazide
-
20% inhibition at 10 mM
Sodium bisulfite
-
partial
Sodium nitrate
-
13% inhibition at 10 mM
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
ferrocenemethanol
-
a redox mediator
-
Os-(tpy)(MeCOOH-bpy)Cl2
-
a redox mediator
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2 - 733
beta-D-glucose
8.3
2-deoxy-D-glucose
-
recombinant enzyme
1.9 - 22.5
beta-D-glucose
952
D-galactose
-
recombinant enzyme
106
D-mannose
-
recombinant enzyme
384
D-xylose
-
recombinant enzyme
0.0638
ferrocinium-methanol
-
recombinant enzyme yGOXpenag, pH 6.0, 50°C
additional information
additional information
-
values for glyco-enzyme and aglyco-enzyme
-
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.03 - 2003
beta-D-glucose
238 - 2000
beta-D-glucose
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.004 - 323
beta-D-glucose
93 - 155
beta-D-glucose
0.027
ferrocinium-methanol
-
recombinant enzyme yGOXpenag, pH 6.0, 50°C
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4.5 - 6.5
-
glycosylated and deglycosylated enzyme
5.1 - 7
-
assay at
5.2 - 6.2
-
recombinant enzyme
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5 - 7.5
-
under O2 and Ar at 37°C, recombinant enzyme yGOXpenag
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
28 - 40
-
recombinant enzyme
40 - 50
-
glycosylated and deglycosylated enzyme
50
-
recombinant enzyme
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
GOX_PENAG
587
0
63965
Swiss-Prot
other Location (Reliability: 1)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
60000
2 * 60000, SDS-PAGE
120000
-
recombinant enzyme, native PAGE
130000 - 150000
-
aglyco-GOD, gel filtration, native PAGE
158000 - 160000
-
sedimentation equilibrium centrifugation
160000
167000
-
glycosylated enzyme, PAGE under non-dissociating conditions
176000
-
glycosylated enzyme, gel filtration
45000
-
4 * 45000, 2 polypeptide chains linked by disulfide bond, sedimentation equilibrium centrifugation, treatment with guanidine-HCl and 2-mercaptoethanol
60000
70000
-
2 * 70000, glyco-GOD, SDS-PAGE
72000
-
2 * 72000, recombinant enzyme, SDS-PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
dimer
2 * 60000, SDS-PAGE
homodimer
2 * 66700, SDS-PAGE and crystal structure analysis
dimer
homodimer
tetramer
-
4 * 45000, 2 polypeptide chains linked by disulfide bond, sedimentation equilibrium centrifugation, treatment with guanidine-HCl and 2-mercaptoethanol
additional information
POSTTRANSLATIONAL MODIFICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
glycoprotein
no glycoprotein
-
recombinant enzyme is nonglycosylated
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
crystal structure analysis, PDB ID 1GPE
deglycosylation and purification to isoelectric homogeneity are important prerequisite steps to obtain crystals suitable for X-ray investigations. Crystals of the deglycosylated enzyme are reproducibly grown using ammonium sulfate as precipitant at pH 7.4 to 7.5. Crystals diffract to at least 2.0 A resolution and belong to the orthorhombic space group P2(1)2(1)2(1), with refined lattice constants of a = 59.3 A, b = 136.3 A and c = 156.7 A. Crystallized as a complex with the coenzyme FAD
the enzyme crystallizes from 1.3 M ammonium sulfate, 100 mM citrate/phosphate buffer pH 7.4 in the orthorhombic space group P212121, with unit-cell dimensions a = 57.6, b = 132.1, c = 151.3 A and one dimeric molecule per asymmetric unit. The structure is determined by molecular replacement and refined at 1.8 A resolution to an R value of 16.4%
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
F418A
12.6fold increase in apparent Km value
H520A
the enzyme variant is almost completely inactive
H520V
the enzyme variant is almost completely inactive
H563A
the enzyme variant is completely inactive
H563V
the enzyme variant is completely inactive
K424E
increased electron transfer (2.4fold), 20% decrease in O2 sensitivity
R516K
the mutant enzyme whose side chain forms only one hydrogen bond with the 3-OH group of beta-D-glucose, exhibits an 80fold higher apparent Km (513 mM) but a Vmax only 70% lower than the wild type
R516Q
the complete elimination of a hydrogen-bond interaction between residue 516 and the 3-OH group of beta-D-glucose through the substitution R516Q effects a 120fold increase in the apparent Km for glucose (to 733 mM) and a decrease in the Vmax to 1/30
S114A/F355L
increased electron transfer, 88% decrease in O2 sensitivity
V464A/K424E
2.4fold increase in electron transfer, 95% decrease in O2 sensitivity
V564S
1.1fold increase in electron transfer, 88% decrease in O2 sensitivity
G423D
K19E
-
site-directed mutagenesis
K23E
-
site-directed mutagenesis
K260E.
-
site-directed mutagenesis
K424E
-
site-directed mutagenesis, the single mutation results in a significant increase in the current density which becomes 2.4 fold higher than the current obtained for the wild-type
K424I
-
site-directed mutagenesis, the mutation does not significantly affect the enzyme activity
K48/50E
-
site-directed mutagenesis
Q184E
-
site-directed mutagenesis
Q75E
-
site-directed mutagenesis
additional information
pH STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
10
-
at 4°C, 7 months, glycine/NaOH buffer, residual activity of the glycosylated enzyme: less than 1%, residual activity of the deglycosylated enzyme: less than 1%
389832
11
-
at 4°C, 7 months, glycine/NaOH buffer, residual activity of the glycosylated enzyme: less than 1%, residual activity of the deglycosylated enzyme: less than 1%
389832
12
-
at 4°C, 7 months, glycine/NaOH buffer, residual activity of the glycosylated enzyme: less than 1%, residual activity of the deglycosylated enzyme: less than 1%
389832
3
-
at 4°C, 7 months, glycine/HCl buffer, residual activity of the glycosylated enzyme: 34%, residual activity of the deglycosylated enzyme: 10%
389832
4.5 - 5.2
-
recombinant enzyme, exhibits more than 80% of the maximum activity
389835
5
-
at 4°C, 7 months, acetate buffer, residual activity of the glycosylated enzyme: 81%, residual activity of the deglycosylated enzyme: 60%
389832
5 - 7
-
recombinant enzyme, more than 90% of the residual activity retained after 72 h incubation at room temperature
389835
6.2 - 6.5
-
recombinant enzyme, exhibits more than 80% of the maximum activity
389835
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
35
-
stable up to
37
-
at 37°C and in pH 7.5 buffer, the half life of the recombinant enzyme yGOXpenag is 6 h
40
-
up to, soluble enzyme
45
-
30 min, considerable inactivation
50
-
at pH 6.0 and at 50°C, the half life of the enzyme is about 20 h, thermal denaturation is observed above 50°C
additional information
GENERAL STABILITY
ORGANISM
UNIPROT
LITERATURE
the enzyme stability is not influenced by physiological concentration of sodium chloride (140 mM)
-
STORAGE STABILITY
ORGANISM
UNIPROT
LITERATURE
-15°C crystalline suspension, stable for at least 8 years
-
0°C, as a solid, stable for at least 2 years
-
4°C, purified recombinant enzyme in 100 mM sodium phosphate, pH 5.1, several months, no loss of activity
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
all reconstituted variants are purified to homogeneity by mild acidification and ion-exchange chromatography
from a partially purified sample, using column chromatography on DEAE-cellulose
-
from commercial preparation
-
isolation of glyco-GOD and aglyco-GOD from tunicamycin containing growth medium
-
of the reactivated recombinant enzyme, using mild acidification and anion-exchange chromatography on Q-Sepharose
-
phenyl Sepharose column chromatography and Q Sepharose column chromatography
-
using ion-exchange chromatography on a Mono Q HR 5/5 column
-
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expression in Escherichia coli, expression of all enzyme variants leads to the formation of insoluble inclusion bodies. Refolding of most variants can be followed by measuring increases in enzyme activity
overexpressed either in Escherichia coli or in Pichia pastoris
cloning of the gene encoding the enzyme and expression in Escherichia coli
-
expressed in Pichia pastoris strain GS115
-
RENATURED/Commentary
ORGANISM
UNIPROT
LITERATURE
refolding after treatment with 8 M urea and 30 mM dithiothreitol and subsequent dilution in a buffer containing reduced glutathione, FAD and glycerol
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
analysis
-
te enzyme is used on electrode surfaces of biosensors
biotechnology
-
GOX is the most widely used enzyme for the development of electrochemical glucose biosensors and biofuel cell in physiological conditions
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Eriksson, K.O.; Kourteva, I.; Yao, K.; Liao, J.L.; Kilar, F.; Hjerten, S.
Application of high-performance chromatographic and electrophoretic methods to the purification and characterization of glucose oxidase and catalase from Penicillium chrysogenum
J. Chromatogr.
397
239-249
1987
Aspergillus niger, Penicillium amagasakiense, Penicillium chrysogenum, Penicillium janthinellum, Talaromyces purpureogenus
Manually annotated by BRENDA team
Bright, H.J.; Porter, D.J.T.
Flavoprotein oxidases
The Enzymes, 3rd Ed. (Boyer, P. D. , ed. )
12
421-505
1975
Aspergillus niger, Penicillium amagasakiense
-
Manually annotated by BRENDA team
Bentley, R.
Glucose oxidase
The Enzymes, 2nd Ed. (Boyer, P. D. , Lardy, H. , Myrbck, K. , eds. )
7
567-586
1963
Aspergillus niger, Mycoderma aceti, Penicillium amagasakiense
-
Manually annotated by BRENDA team
Kusai, K.; Sekuzu, I.; Hagihara, B.; Okumuki, K.; Yamaguchi, S.; Nakai, M.
Crystallization of glucose oxidase from Penicillium amagasakiense
Biochim. Biophys. Acta
40
555-557
1960
Penicillium amagasakiense
Manually annotated by BRENDA team
Yoshimura, T.; Isemura, T.
Subunit structure of glucose oxidase from Penicillium amagasakiense
J. Biochem.
69
839-846
1971
Penicillium amagasakiense
Manually annotated by BRENDA team
Hayashi, S.; Nakamura, S.
Comparison of fungal glucose oxidases. Chemical, physicochemical and immunological studies
Biochim. Biophys. Acta
438
37-48
1976
Aspergillus niger, Penicillium amagasakiense
Manually annotated by BRENDA team
Kim, J.M.; Schmid, R.D.
Comparison of Penicillium amagasakiense glucose oxidase purified as glyco- and aglyco-proteins
FEMS Microbiol. Lett.
78
221-226
1991
Penicillium amagasakiense
-
Manually annotated by BRENDA team
Kalisz, H.M.; Hendle, J.; Schmid, R.D.
Structural and biochemical properties of glycosylated and deglycosylated glucose oxidase from Penicillium amagasakiense
Appl. Microbiol. Biotechnol.
47
502-507
1997
Penicillium amagasakiense
Manually annotated by BRENDA team
Witt, S.; Singh, M.; Kalisz, H.M.
Structural and kinetic properties of nonglycosylated recombinant Penicillium amagasakiense glucose oxidase expressed in Escherichia coli
Appl. Environ. Microbiol.
64
1405-1411
1998
Penicillium amagasakiense
Manually annotated by BRENDA team
Courjean, O.; Mano, N.
Recombinant glucose oxidase from Penicillium amagasakiense for efficient bioelectrochemical applications in physiological conditions
J. Biotechnol.
151
122-129
2011
Aspergillus niger, Penicillium amagasakiense
Manually annotated by BRENDA team
Wohlfahrt, G.; Witt, S.; Hendle, J.; Schomburg, D.; Kalisz, H.M.; Hecht, H.J.
1.8 and 1.9 A resolution structures of the Penicillium amagasakiense and Aspergillus niger glucose oxidases as a basis for modelling substrate complexes
Acta Crystallogr. Sect. D
55
969-977
1999
Aspergillus niger (P13006), Aspergillus niger, Penicillium amagasakiense (P81156), Penicillium amagasakiense
Manually annotated by BRENDA team
Witt, S.; Wohlfahrt, G.; Schomburg, D.; Hecht, H.-J.; Kalisz, H.M.
Conserved arginine-516 of Penicillium amagasakiense glucose oxidase is essential for the efficient binding of beta-D-glucose
Biochem. J.
347
553-559
2000
Penicillium amagasakiense (P81156), Penicillium amagasakiense, Penicillium amagasakiense ATCC 28686 (P81156)
Manually annotated by BRENDA team
Hendle, J.; Hecht, H.J.; Kalisz, H.M.; Schmid, R.D.; Schomburg, D.
Crystallization and preliminary X-ray diffraction studies of a deglycosylated glucose oxidase from Penicillium amagasakiense
J. Mol. Biol.
223
1167-1169
1992
Penicillium amagasakiense (P81156), Penicillium amagasakiense
Manually annotated by BRENDA team
Suraniti, E.; Courjean, O.; Gounel, S.; Tremey, E.; Mano, N.
Uncovering and redesigning a key amino acid of glucose oxidase for improved biotechnological applications
Electroanalysis
25
606-611
2013
Penicillium amagasakiense
-
Manually annotated by BRENDA team
Janati-Fard, F.; Housaindokht, M.; Monhemi, H.
Investigation of structural stability and enzymatic activity of glucose oxidase and its subunits
J. Mol. Catal. B
134
16-24
2016
Penicillium amagasakiense (P81156)
-
Manually annotated by BRENDA team
Todde, G.; Hovmoeller, S.; Laaksonen, A.; Mocci, F.
Glucose oxidase from Penicillium amagasakiense characterization of the transition state of its denaturation from molecular dynamics simulations
Proteins
82
2353-2363
2014
Penicillium amagasakiense
Manually annotated by BRENDA team
Mano, N.
Engineering glucose oxidase for bioelectrochemical applications
Bioelectrochemistry
128
218-240
2019
Aspergillus niger (P13006), Penicillium amagasakiense (P81156)
Manually annotated by BRENDA team