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Information on EC 1.1.1.82 - malate dehydrogenase (NADP+) and Organism(s) Sorghum bicolor and UniProt Accession P17606

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EC Tree
IUBMB Comments
Activated by light.
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This record set is specific for:
Sorghum bicolor
UNIPROT: P17606
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Word Map
The taxonomic range for the selected organisms is: Sorghum bicolor
The expected taxonomic range for this enzyme is: Eukaryota, Archaea, Bacteria
Reaction Schemes
Synonyms
nadp malate dehydrogenase, nadp-linked malate dehydrogenase, malate nadp dehydrogenase, malate dehydrogenase (nadp+), more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
NADP-dependent malate dehydrogenase
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dehydrogenase, malate (nicotinamide adenine dinucleotide phosphate)
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malate NADP dehydrogenase
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-
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malic dehydrogenase (nicotinamide adenine dinucleotide phosphate)
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-
-
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NADP malate dehydrogenase
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-
-
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NADP-dependent malate dehydrogenase
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NADP-linked malate dehydrogenase
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-
-
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NADP-malate dehydrogenase
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-
-
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NADP-malic enzyme
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-
-
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NADP-MDH
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-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
redox reaction
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oxidation
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reduction
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SYSTEMATIC NAME
IUBMB Comments
(S)-malate:NADP+ oxidoreductase
Activated by light.
CAS REGISTRY NUMBER
COMMENTARY hide
37250-19-4
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SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
oxaloacetate + NADPH
(S)-malate + NADP+
show the reaction diagram
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-
?
oxaloacetate + NADPH + H+
(S)-malate + NADP+
show the reaction diagram
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-
-
?
oxaloacetate + NADPH
(S)-malate + NADP+
show the reaction diagram
oxaloacetate + NADPH + H+
(S)-malate + NADP+
show the reaction diagram
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-
-
?
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
oxaloacetate + NADPH
(S)-malate + NADP+
show the reaction diagram
COFACTOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
NADPH
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cofactor
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
additional information
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KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.03 - 0.043
NADPH
0.019 - 0.021
oxaloacetate
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
6.5 - 8
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recombinant enzyme
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
MDHP1_SORBI
429
0
46455
Swiss-Prot
Chloroplast (Reliability: 4)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
42207
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x * 42207, calculation from nucleotide sequence
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
?
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x * 42207, calculation from nucleotide sequence
dimer
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2 * 40000-41000, recombinant enzyme, SDS-PAGE
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expression in Escherichia coli, expression vectors pJ2PCC1 and pJ2PCC2
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structure and characterization of the gene, the gene contains 13 introns and 14 exons which encode a 429 amino acid precursor. The gene transcript contains an untranslated leader sequence of 44 nucleotides
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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Luchetta, P.; Cretin, C.; Gadal, P.
Structure and characterization of the Sorghum vulgare gene encoding NADP-malate dehydrogenase
Gene
89
171-177
1990
Sorghum bicolor
Manually annotated by BRENDA team
Krimm, I.; Goyer, A.; Issakidis-Bourguet, E.; Miginiac-Maslow, M.; Lancelin, J.M.
Direct NMR observation of the thioredoxin-mediated reduction of the chloroplast NADP-malate dehydrogenase provides a structural basis for the relief of autoinhibition
J. Biol. Chem.
274
34539-34542
1999
Sorghum bicolor
Manually annotated by BRENDA team
Cretin, C.; Luchetta, P.; Joly, C.; Decottignies, P.; Lepiniec, L.; Gadal, P.; Sallantin, M.; Huet, J.C.; Pernollet, J.C.
Primary structure of sorghum malate dehydrogenase (NADP) deduced from cDNA sequence. Homology with malate dehydrogenase (NAD)
Eur. J. Biochem.
192
299-303
1990
Sorghum bicolor
Manually annotated by BRENDA team
Johansson, K.; Ramaswamy, S.; Saarinen, M.; Lemaire-Chamley, M.; Issakidis-Bourguet, E.; Miginiac-Maslow, M.; Eklund, H.
Structural basis for light activation of a chloroplast enzyme: The structure of Sorghum NADP-malate dehydrogenase in its oxidized form
Biochemistry
38
4319-4326
1999
Sorghum bicolor (P17606)
Manually annotated by BRENDA team
Hirasawa, M.; Ruelland, E.; Schepens, I.; Issakidis-Bourguet, E.; Miginiac-Maslow, M.; Knaff, D.B.
Oxidation-reduction properties of the regulatory disulfides of sorghum chloroplast nicotinamide adenine dinucleotide phosphate-malate dehydrogenase
Biochemistry
39
3344-3350
2000
Sorghum bicolor, Sorghum sp.
Manually annotated by BRENDA team
Jacquot, J.P.; Keryer, E.; Issakidis, E.; Decottignies, P.; Miginiac-Maslow, M.; Schmitter, J.M.; Cretin, C.
Properties of recombinant NADP-malate dehydrogenases from Sorghum vulgare leaves expressed in Escherichia coli cells
Eur. J. Biochem.
199
47-51
1991
Sorghum bicolor
Manually annotated by BRENDA team
Rondeau, P.; Rouch, C.; Besnard, G.
NADP-malate dehydrogenase gene evolution in Andropogoneae (Poaceae): gene duplication followed by sub-functionalization
Ann. Bot.
96
1307-1314
2005
Chrysopogon zizanioides (Q8H0J7), Chrysopogon zizanioides (Q8L5S9), Dichanthium aristatum (Q8H0R5), Flaveria trinervia (Q42737), Heteropogon contortus (Q2MG92), Hyparrhenia rufa (Q2MG94), Ischaemum koleostachys (Q8H0Q3), Megathyrsus maximus (Q8H0N9), Melinis repens (Q2MG93), Oplismenus compositus (Q8H0P4), Oryza sativa, Paspalum paniculatum (Q8H0N5), Pogonatherum paniceum (Q8H0N4), Saccharum hybrid cultivar R570 (Q4W4C2), Saccharum officinarum (Q1RS10), Saccharum officinarum (Q8L6C8), Saccharum spontaneum (Q8H0M0), Setaria geminata (Q1RS11), Sorghum arundinaceum (Q8H0L7), Sorghum bicolor (P17606), Sorghum bicolor (P37229), Themeda quadrivalvis (Q8H0K0), Zea mays (P15719)
Manually annotated by BRENDA team