1.13.11.39: biphenyl-2,3-diol 1,2-dioxygenase

This is an abbreviated version!
For detailed information about biphenyl-2,3-diol 1,2-dioxygenase, go to the full flat file.

Reaction

Synonyms

2'-aminobiphenyl-2,3-diol 1,2-dioxygenase, 2,3-DBDO, 2,3-DBPD, 2,3-DHBD, 2,3-DHBP dioxygenase, 2,3-dihydroxy-biphenyl 1,2-dioxygenase, 2,3-dihydroxybiphenyl 1,2-dioxygenase, 2,3-dihydroxybiphenyl dioxygenase, 2,3-dihydroxybiphenyl-1,2-dioxygenase, 2,3-dihydroxybiphenyl:oxygen 1,2 oxidoreductase, 2,3-diOH-biphenyl 1,2-dioxygenase, 2,3DHBD, 2-aminobiphenyl-2,3-diol-1,2-dioxygenase, 23 OHBP oxygenase, 3-phenylcatechol dioxygenase, biphenyl-2,3-diol dioxygenase, BPDO, BphC, BphC1, BphC1-BN6, BphC2, BphC2-BN6, BphC3, bphC5, BphCLA-4, BphC_JF8, BphC_LA-4, C23o, CarB, CarBaBb, DHB12O, DHBD, EtbC, manganese(II)-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase, RrbphCI

ECTree

     1 Oxidoreductases

         1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)

             1.13.11 With incorporation of two atoms of oxygen

                1.13.11.39 biphenyl-2,3-diol 1,2-dioxygenase

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Results	in table
758	AA Sequence
7	Application
1	CAS Registry Number
53	Cloned(Commentary)
7	Crystallization (Commentary)
8	Expression
28	General Information
1	General Stability
74	Inhibitors
21	kcat/KM [mM/s]
9	Ki Value [mM]
97	KM Value [mM]
41	Metals/Ions
34	Molecular Weight [Da]
112	Natural Substrates/ Products (Substrates)
465	Organism
5	Oxidation Stability
8	Pathway
20	PDB ID
17	pH Optimum
7	pH Range
3	pH Stability
1	pI Value
9	Protein Variants
22	Purification (Commentary)
1	Reaction
4	Reaction Type
162	Reference
1	Renatured (Commentary)
26	Specific Activity [micromol/min/mg]
3	Storage Stability
466	Substrates and Products (Substrate)
55	Subunits
140	Synonyms
1	Systematic Name
18	Temperature Optimum [°C]
4	Temperature Range [°C]
15	Temperature Stability [°C]
61	Turnover Number [1/s]

Natural Substrates Products

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Natural Substrates Products on EC 1.13.11.39 - biphenyl-2,3-diol 1,2-dioxygenase

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NATURAL SUBSTRATE

NATURAL PRODUCT

REACTION DIAGRAM

ORGANISM

UNIPROT

COMMENTARY
(Substrate)

LITERATURE
(Substrate)

COMMENTARY
(Product)

LITERATURE
(Product)

REVERSIBILITY
r=reversible
ir=irreversible
?=not specified

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

10 entries

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

41 entries

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

Achromobacter sp.

B3VTK1, B3VTL5

-

725631

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

Achromobacter sp. BP3

B3VTK1, B3VTL5

-

725631

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

Bacillus sp. (in: Bacteria)

Q8GR45

-

724188

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

Bacillus sp. (in: Bacteria) JF8

Q8GR45

-

724188

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

Delftia acidovorans

Q8KRD4

-

742643

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

Delftia acidovorans SMN4

Q8KRD4

-

742643

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

Dyella ginsengisoli

-

-

723977, 743118

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

Dyella ginsengisoli LA-4

-

-

723977, 743118

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

Paraburkholderia xenovorans

-

-

742574

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

uncultured bacterium

F2X5L9

-

724640

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Acinetobacter sp.

-

-

439414

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Burkholderia cepacia

-

-

285295, 439407, 439409, 439411, 439412, 439413, 439415, 439416, 439420

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Burkholderia cepacia LB400

-

-

285295, 439415, 439420

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Comamonas testosteroni

-

-

439405, 439411, 439413, 439414, 439418

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Cupriavidus necator

-

-

439414

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas aeruginosa

-

-

439410, 439411, 439412, 439413, 439414

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas cruciviae

-

relative activity 100%

439402

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas oleovorans

-

-

439403, 439409, 439410, 439411, 439412, 439413, 439414, 439418

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas oleovorans KF707

-

-

439403, 439409, 439412, 439413, 439418

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas oleovorans KF714

-

-

439413

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas putida

-

-

439402, 439406, 439408, 439409

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas putida

Q52032

-

439409

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas putida

-

-

439411, 439412, 439413

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas putida

Q52032

-

439413

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas putida

-

-

439418, 439420

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas putida

Q52032

third step in biphenyl degradation pathway

439414

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas putida KF715

-

-

439406, 439409, 439412, 439413

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas putida KT 2442

-

-

439418, 439420

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas putida OU83

Q52032

-

439409, 439413

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas putida OU83

-

-

439413

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas putida PpG7

-

-

439413

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas sp.

-

-

439409, 439410, 439412, 439413, 439415, 439416

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas sp.

-

aerobic biphenyl biodegradation pathway

439407

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas sp.

-

aerobic catabolism of virtually all aromatic growth substrates

439411

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas sp. CB406

-

aerobic catabolism of virtually all aromatic growth substrates

439411

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas sp. DJ-12

-

-

439409

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas sp. DJ77

-

-

439416

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Pseudomonas sp. IC

-

-

439413

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Rhodococcus erythropolis

-

-

439412

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Rhodococcus erythropolis TA421

-

-

439412

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Rhodococcus globerulus

-

-

285295, 439409, 439410, 439412, 439416, 439417

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Rhodococcus globerulus

-

aerobic biphenyl biodegradation pathway

439407, 439408

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Rhodococcus globerulus P6

-

-

285295

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Rhodococcus globerulus P6

-

aerobic biphenyl biodegradation pathway

439408

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Rhodococcus globerulus P6

-

-

439409, 439410, 439412, 439416, 439417

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Rhodococcus sp.

Q53126

-

439412, 439413

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Rhodococcus sp. RHA1

Q53126

-

439412, 439413

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Sphingobium yanoikuyae

-

-

439410, 439411, 439412, 439413, 439414, 439416

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Sphingobium yanoikuyae Q1

-

-

439416

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Sphingomonas sp.

-

-

439417

-

-

?

biphenyl-2,3-diol + O2

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O

Sphingomonas sp. BN6

-

-

439417

-

-

?