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Search term: biotechnology

Results 1 - 100 of 844 > >>
EC Number Recommended Name Application Commentary
Show all pathways known for 1.1.1.47Display the word mapDisplay the reaction diagram Show all sequences 1.1.1.47glucose 1-dehydrogenase [NAD(P)+] biotechnology (±)-ethyl mandelate are important intermediates in the synthesis of numerous pharmaceuticals. Efficient routes for the production of these derivatives are highly desirable. A co-immobilization strategy is developed to overcome the issue of NADPH demand in the short-chain dehydrogenase/reductase (SDR) catalytic process. The SDR from Thermus thermophilus HB8 and the NAD(P)-dependent glucose dehydrogenase (GDH) from Thermoplasma acidophilum DSM 1728 are co-immobilized on silica gel. This dual-system offers an efficient route for the biosynthesis of (+/-)-ethyl mandelate
Show all pathways known for 3.1.3.8Display the word mapDisplay the reaction diagram Show all sequences 3.1.3.83-phytase biotechnology a 20fold increase in total root phytase activity in transgenic lines expressing Aspergillus niger phytase results in improved phosphorus nutrition, such that the growth and phosphorus content of the plants is equivalent to control plants supplied with inorganic phosphate. Use of gene technology to improve the ability of plants to utilize accumulated forms of soil organic phosphorus
Show all pathways known for 3.1.3.26Display the word mapDisplay the reaction diagram Show all sequences 3.1.3.264-phytase biotechnology a 20fold increase in total root phytase activity in transgenic lines expressing Aspergillus niger phytase results in improved phosphorus nutrition, such that the growth and phosphorus content of the plants is equivalent to control plants supplied with inorganic phosphate. Use of gene technology to improve the ability of plants to utilize accumulated forms of soil organic phosphorus
Display the word mapDisplay the reaction diagram Show all sequences 2.4.1.1524-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase biotechnology a baculoviral expression system of FucT-IX appears to be a promising strategy for overproduction as compared to overproduction in Escherichia coli or mammalian cells
Display the word mapDisplay the reaction diagram Show all sequences 3.5.1.93glutaryl-7-aminocephalosporanic-acid acylase biotechnology a biological and colometric method is evaluated for determination of cephalosporin acylase product in bacteria
Show all pathways known for 1.1.1.27Display the word mapDisplay the reaction diagram Show all sequences 1.1.1.27L-lactate dehydrogenase biotechnology a chimeric bifunctional enzyme composing of galactose dehydrogenase from Pseudomonas fluorescens and lactate dehydrogenase from Bacillus stearothermophilus is successfully constructed. The chimeric enzyme is able to recycle NAD with a continuous production of lactate without any externally added NADH
Show all pathways known for 3.5.4.1Display the word mapDisplay the reaction diagram Show all sequences 3.5.4.1cytosine deaminase biotechnology a chitosan-entrapped cytosine deaminase nanocomposite is developped. Sustained release of cytosine deaminase from the nanocomposite up to one week depicts its potential implication in prodrug inducted enzyme therapy
Show all pathways known for 2.5.1.78Display the word mapDisplay the reaction diagram Show all sequences 2.5.1.786,7-dimethyl-8-ribityllumazine synthase biotechnology a circularly permuted variant of lumazine synthase affords versatile building blocks for the construction of nanocompartments that can be easily produced, tailored, and diversified. The topologically altered protein self-assembles into spherical and tubular cage structures with morphologies that can be controlled by the length of the linker connecting the native termini. Permutated lumazine synthase proteins integrate into wild-type and other engineered lumazine synthase assemblies by coproduction in Escherichia coli to form patchwork cages. This coassembly strategy enables encapsulation of guest proteins in the lumen, modification of the exterior through genetic fusion, and tuning of the size and electrostatics of the compartments
Display the word mapDisplay the reaction diagram Show all sequences 4.2.2.2pectate lyase biotechnology a combined (enzymatic and chemical) process using a Bacillus pumilus strain (DKS1), isolated from the soil, is used to degum ramie bast fibres. Results indicate the process provides an economical and eco-friendly method for the small scale as well as large-scale degumming of decorticated ramie fibre. Results are of importance for the textile as well as paper industry
Show all pathways known for 4.3.1.1Display the reaction diagram Show all sequences 4.3.1.1aspartate ammonia-lyase biotechnology a complete biocatalytic process to synthesize high concentrations of L-aspartate catalyzed by aspartase from Bacillus sp. YM55-1 (AspB) is established using an immobilized enzyme in three different supports. MANA-agarose derivative could be selected as the most suitable biocatalyst for the synthesis of Asp due to the simplicity of the method and performance
Display the word mapDisplay the reaction diagram Show all sequences 4.1.2.48low-specificity L-threonine aldolase biotechnology a continuous bioconversion system for L-threo-3,4-dihydroxyphenylserine production is developed that uses whole-cell biocatalyst of recombinant Escherichia coli expressing L-TA genes cloned from Streptomyces avelmitilis MA-4680. Maximum conversion rates are observed at 2 M glycine, 145 mM 3,4-dihydroxybenzaldehyde, 0.75% Triton-X, 5 g Escherichia coli cells/l, pH 6.5 and 10°C. In the optimized condition, overall productivity is 8 g/l
Show all pathways known for 3.1.3.8Display the word mapDisplay the reaction diagram Show all sequences 3.1.3.83-phytase biotechnology a cross-linked enzyme aggregate (CLEA) of 3-phytase is synthesised, which is incubated with vanadate and tested as a biocatalyst in the asymmetric sulfoxidation of thioanisole using hydrogen peroxide as the oxidant. The results show that the 3-phytase-CLEA demonstrates a similar efficiency (ca. 95% conversion) and asymmetric induction (ca. 60%) as the free enzyme. Moreover, the 3-phytase-CLEA can be reused at least three times without significant loss of activity
Show all pathways known for 2.3.1.94Display the word mapDisplay the reaction diagram Show all sequences 2.3.1.946-deoxyerythronolide-B synthase biotechnology a derivative of Escherichia coli is genetically engineered to produce 6-deoxyerythronolide B, the macrocyclic core of the antibiotic erythromycin
Display the word mapDisplay the reaction diagram Show all sequences 3.2.1.35hyaluronoglucosaminidase biotechnology a fluorescent substrate (FRET-HA) to quantitatively assess hyaluronidase activity is developed
Show all pathways known for 1.1.5.2Display the word mapDisplay the reaction diagram Show all sequences 1.1.5.2glucose 1-dehydrogenase (PQQ, quinone) biotechnology a Glucose sensitive biosensor containing GDH immobilized on Prussian blue (PB)-modified graphite electrode is designed. Properties of the biosensor are investigated in the cathodic and anodic response detection regions. It is shown, that anodic response of the biosensor is sum of two signals: direct electron transport from reduced pyrroloquinoline quinine to the electrode and by formation of the pyrroloquinoline quinone-oxygen-Prussion blue-carbon ternary complex. Cathodic response of the biosensor is based on the oxidation of the reduced pyrroloquinoline quinone by Prussian blue-oxygen-Prussian blue complex. Electrochemical regeneration of the enzyme does not produce free hydrogen peroxide
Display the word mapDisplay the reaction diagram Show all sequences 4.2.2.14glucuronan lyase biotechnology a glucuronan lyase is immobilized on a monolithic Convective Interaction Media disk. Degradations of three glucuronans with various O-acetylation degrees is investigated and compared with degradations using free enzyme. The immobilized glucuronan lyase is inhibited by the O-acetylation degree like the free enzyme. 1H NMR analyses are used to study the O-acetylation degree of oligoglucuronans and demonstrate that the average degrees of polymerization are inclusive between 4 and 13 after 24 h of degradation. This first immobilization of a glucuronan lyase constitutes a tool to produce oligoglucuronans
Display the word mapDisplay the reaction diagram Show all sequences 3.2.1.183UDP-N-acetylglucosamine 2-epimerase (hydrolysing) biotechnology a GNE-deficient HEK293 cell line proves its potential for the production of glycoproteins with modified sialylation, gaining therapeutic and diagnostic glycoproteins, and efficient application of metabolic oligosaccharide engineering
Display the word mapDisplay the reaction diagram Show all sequences 2.3.1.84alcohol O-acetyltransferase biotechnology a low-cost fermentation process for isoamyl acetate biosynthesis by overexpressing the yeast alcohol acetyl-transferase AFT1 in Escherichia coli is developed
Display the word mapDisplay the reaction diagram Show all sequences 2.3.1.84alcohol O-acetyltransferase biotechnology a low-cost fermentation process for isoamyl acetate biosynthesis by overexpressing the yeast alcohol acetyl-transferase AFT2 in Escherichia coli is developed
Display the word mapDisplay the reaction diagram Show all sequences 3.4.21.111aqualysin 1 biotechnology a maltose biding protein (MBP)-fused proaqualysin I expression plasmid is developed in which MBP is attached to the N-terminus of proaqualysin I. MBP appears effectively to suppress the folding-promoting activity of the N-terminal propeptide when the bacteria are grown at 30°C, leading to a massive accumulation of fusion aqualysin I precursor. The precursor is converted efficiently to mature aqualysin I by heat treatment at 70°C. By analyzing the product it is confirmed that aqualysin I is initially expressed as a whole fusion protein and then processed autocatalytically
Show all pathways known for 3.2.1.37Display the word mapDisplay the reaction diagram Show all sequences 3.2.1.37xylan 1,4-beta-xylosidase biotechnology a method for bioconversion of 3-O-beta-D-xylopyranosyl-6-O-beta-D-glucopyranosyl-cycloastragenol into cycloastragenol is optimized. A green and efficient biotransformation method is established for 3-O-beta-D-xylopyranosyl-6-O-beta-D-glucopyranosyl-cycloastragenol using beta-glucosidase Dth3 and beta-xylosidase Xln-DT
Show all pathways known for 6.1.1.1Display the word mapDisplay the reaction diagram Show all sequences 6.1.1.1tyrosine-tRNA ligase biotechnology a mutant Methanococcus jannaschii tyrosyl amber suppressor tRNA, Tyr MjtRNA CUR/tyrosyl-tRNA synthetase (MjTyrRS) pair is developed to uniquely incorporate phenylselenocysteine in response to the amber TAG codon in Escherichia coli. After being efficiently converted into dehydroalanine under mild conditions, Michael addition reactions with the corresponding thiols can be used to synthesize N-methyl- and N-acetyl-lysine analogues
Display the word mapDisplay the reaction diagram Show all sequences 3.4.22.37gingipain R biotechnology a naive camel nanobody library is constructed and phage display is used to select one nanobody toward RgpB with picomolar affinity. The nanobody is highly specific for RgpB given that it does not bind to the homologous gingipain HRgpA, indicating the presence of a binding epitope within the immunoglobulin-like domain of RgpB. RgpB can be used as a specific biomarker for Porphyromonas gingivalis infection
Display the word mapDisplay the reaction diagram Show all sequences 4.1.99.3deoxyribodipyrimidine photo-lyase biotechnology a new class of photolyases with specificity for cyclobutane pyrimidine dimers in ssDNA is defined. Members of these branch are found in bacteria, plants, and animals, and are designated Cry-DASH, because of the lack of significant photorepair activity on dsDNA
Show all pathways known for 2.3.1.94Display the word mapDisplay the reaction diagram Show all sequences 2.3.1.946-deoxyerythronolide-B synthase biotechnology a new Escherichia coli stain, YW9, is created, featuring a plasmid-free heterologous pathway for the production of the polyketide product 6-deoxyerythronolide B
Display the word mapDisplay the reaction diagram Show all sequences 4.2.2.3mannuronate-specific alginate lyase biotechnology a new highly specific and sensitive capillary electrophoresis method for the determination of the total alginic acid (AA) content in pharmaceutical formulations is described by means of capillary electrophoresis at 230 nm after treatment with alginate lyase and separation of unsaturated products, DELTA-oligomers (DELTA-HexA-[HexA]n), in particular, DP3 (DELTA-HexA-HexA-HexA) and DP4 (DELTAHexA-HexA-HexA-HexA). The capillary electrophoresis method is applied to the determination of AA content of both solid and liquid formulations that also contain antacid ingredients, mainly aluminium, sodium and potassium bicarbonate, and emulsifying and flavouring agents
Show all pathways known for 1.3.5.1Display the word mapDisplay the reaction diagram Show all sequences 1.3.5.1succinate dehydrogenase biotechnology a new host-vector system for Mortierella alpina 1S-4, zygomycetes, on the basis of self-cloning for the industrial application of Mortierella transformants is developed. Transformants expressing the Escherichia coli uidA gene encoding beta-glucuronidase by using the mutant H243L as the selectable marker (leading to to carboxin resistance)
Display the word mapDisplay the reaction diagram Show all sequences 3.2.1.156oligosaccharide reducing-end xylanase biotechnology a novel method for producing a glycosynthase from an inverting glycoside hydrolase by mutating a residue that holds the nucleophilic water molecule (Y198) with the general base residue while keeping the general base residue intact
Display the word mapDisplay the reaction diagram Show all sequences 1.1.1.14920alpha-hydroxysteroid dehydrogenase biotechnology a process is developed that that allows the production of 20alpha- dihydrodydrogesterone at technical scale (several grams of 20a-DHD per week and fermenter). Genetic improvement of the production strain, an increase of substrate solubility by addition of ß-cyclodextrin, and the development of a sophisticated high-cell density fermentation at pilot scale are employed. By usage of the exemplary substrate progesterone, it is hsown that this innovative fission yeast-based whole cell biotransformation process is transferable to the conversion of other AKR1C1 substrates without special adaptation
Show all pathways known for 6.3.2.2Display the word mapDisplay the reaction diagram Show all sequences 6.3.2.2glutamate-cysteine ligase biotechnology a protein transduction approach whereby recombinant GCL protein can be rapidly and directly transferred into cells when coupled to the HIV TAT protein transduction domain. The TAT-GCL fusion proteins are capable of heterodimerization and formation of functional GCL holoenzyme in vitro. Exposure of Hepa-1c1c7 cells to the TAT-GCL fusion proteins results in the time- and dose-dependent transduction of both GCL subunits and increased cellular GCL activity and glutathione levels. A heterodimerization-competent, enzymatically deficient GCLC-TAT mutant was also generated in an attempt to create a dominant-negative suppressor of GCL
Show all pathways known for 6.1.1.1Display the word mapDisplay the reaction diagram Show all sequences 6.1.1.1tyrosine-tRNA ligase biotechnology a rapid, straightforward, one plasmid dual positive/negative selection system for the evolution of aminoacyl-tRNA synthetases with altered specifities in Escherichia coli is developed
Show all pathways known for 3.1.3.1Display the word mapDisplay the reaction diagram Show all sequences 3.1.3.1alkaline phosphatase biotechnology a simple and fast dynamically coated capillary electrophoretic method is developed for the characterization and inhibition studies of alkaline phosphatases
Display the word mapDisplay the reaction diagram Show all sequences 3.4.17.1carboxypeptidase A biotechnology a strategy is shown for the expression of MeCPA-His6PR in the cytosol of Escherichia coli and a relatively simple procedure to purify it to homogeneity. The bacterial system yields about 0.5 mg of pure enzyme per liter of cell culture and is more convenient and less expensive than is the production of MeCPA in insect cells
Show all pathways known for 1.4.1.2Display the word mapDisplay the reaction diagram Show all sequences 1.4.1.2glutamate dehydrogenase biotechnology a strategy to control flocculation is investigated using dimorphic yeast, Benjaminiella poitrasii as a model. Parent form of this yeast (Y) exhibit faster flocculation (11.1 min) than the monomorphic yeast form mutant Y-5 (12.6 min). Flocculation of both Y and Y-5 can be altered by supplementing either substrates or inhibitor of NAD-glutamate dehydrogenase (NAD-GDH) in the growth media. The rate of flocculation is promoted by alpha-ketoglutarate or isophthalic acid and decelerated by glutamate with a statistically significant inverse correlation to corresponding NAD-GDH levels. This opens up new possibilities of using NAD-GDH modulating agents to control flocculation in fermentations for easier downstream processing
Display the word mapDisplay the reaction diagram Show all sequences 3.4.24.26pseudolysin biotechnology A2 protease is usable for shrimp waste deproteinization in the process of chitin preparation, percent of protein removal after 3 h hydrolysis at 40°C with an enzyme/substrate ratio of 5 U/mg protein is about 75%. A2 proteolytic preparation also demonstrates powerful depilating capabilities of hair removal from bovine skin
Display the word mapDisplay the reaction diagram Show all sequences 3.1.1.73feruloyl esterase biotechnology ability of the enzyme to be active in alkaline pH may be advantageous in biotechnological applications and especially in the treatment of alkaline woodpulp
Display the word mapDisplay the reaction diagram Show all sequences 3.4.22.14actinidain biotechnology actinidin might be utilized to eliminate the milk fat globule membranes (MFGM) protein residues from cream and its derivatives
Show all pathways known for 1.2.4.1Display the word mapDisplay the reaction diagram Show all sequences 1.2.4.1pyruvate dehydrogenase (acetyl-transferring) biotechnology active expression of enzyme from non-halophilic Zymomonas mobilis in the haloarchaeon Haloferax volcanii with no difference in the secondary structure. Post-transcriptional mechanisms in the stationary phase appear to limit the amount of recombinant protein expressed
Display the word mapDisplay the reaction diagram Show all sequences 3.1.1.74cutinase biotechnology adsorption of enzyme onto the surface of poly(methyl methacrylate) latex particles. Up to 50% decrease in specific activity at pH-values 4.5 and 5.2. Almost no inactivation upon adsorption at pH 7.0 and 9.2. 60% increase in maximum adsorption with temperature raising from 25 to 50°C
Display the word mapDisplay the reaction diagram Show all sequences 2.3.2.13protein-glutamine gamma-glutamyltransferase biotechnology after fermentation in presence of enzyme, wheat dough has higher resistance to stretching and lower extensibility than control, dough contains more of the smallest and less large air bubbles. Enzyme improves formation of protein network in bread baked from normal or organic flour but at higher dosage causes uneven ditribution
Display the word mapDisplay the reaction diagram Show all sequences 2.3.1.74chalcone synthase biotechnology Agrobacterium-mediated infection of Petunia hybrida plants with tobacco rattle virus bearing fragments of Petunia genes results in systemic infection and virus-induced gene silencing of the homologous host genes. Infection with TRV containing a chalcone synthase fragment results in silencing of anthocyanin production in infected flowers. Value of virus-induced gene silencing with tandem constructs containing CHS as reporter and a target gene as a tool for examining the function of floral-associated genes
Show all pathways known for 1.1.1.21Display the word mapDisplay the reaction diagram Show all sequences 1.1.1.21aldose reductase biotechnology ALDRXV4 gene from Xerophyta viscosa is a potential candidate for developing stress-tolerant crop plants
Show all pathways known for 3.1.3.1Display the word mapDisplay the reaction diagram Show all sequences 3.1.3.1alkaline phosphatase biotechnology alkaline phosphatase from Escherichia coli is immobilized by copolymerization with resorcinol. The phosphatase-polyresorcinol complex synthesized retains about 74% of the original enzymatic activity. On addition to soil, free enzyme is completely inactivated in 4 days, whereas the phosphatase-polyresorcinol complex is comparatively stable.Barley seed coated with the immobilized enzyme exhibits higher rhizosphere phosphatase activity. Under pot culture conditions, an increase in the soil inorganic phosphorus is detected when the seed is encapsulated with the phosphatase-polyresorcinol complex, and a positive influence on biomass and inorganic phosphorus concentration of shoot is observed
Display the word mapDisplay the reaction diagram Show all sequences 4.2.99.21isochorismate lyase biotechnology alternative computational rational approach to improve the secondary catalytic activity of enzymes, taking as a test case the IPL enzyme. The approach is based on the use of molecular dynamic simulations employing hybrid quantum mechanics/molecular mechanics methods that allow describing breaking and forming bonds
Show all pathways known for 6.3.4.16Display the word mapDisplay the reaction diagram Show all sequences 6.3.4.16carbamoyl-phosphate synthase (ammonia) biotechnology ammonia elimination as functional marker in hepatocyte cultivation and zonation in a bioreactor, and construction of a bioartificial liver, overview
Display the word mapDisplay the reaction diagram Show all sequences 1.2.1.67vanillin dehydrogenase biotechnology Amycolatopsis sp. ATCC 39116 vdh mutant represents an optimized and industrially applicable platform for biotechnological production of natural vanillin
Display the word mapDisplay the reaction diagram Show all sequences 2.4.1.4amylosucrase biotechnology amylosucrase has great potential in the biotechnology and food industries, due to its multifunctional enzyme activities. It can synthesize alpha-1,4-glucans, like amylose, from sucrose as a sole substrate. It can also utilize various other molecules as acceptors. In addition, amylosucrase produces sucrose isomers such as turanose and trehalulose. It also efficiently synthesizes modified starch with increased ratios of slow digestive starch and resistant starch, and glucosylated functional compounds with increased water solubility and stability. It produces turnaose more efficiently than other carbohydrate-active enzymes. Amylose synthesized by amylosucrase forms microparticles and these can be utilized as biocompatible materials with various bio-applications, including drug delivery, chromatography, and bioanalytical sciences
Display the word mapDisplay the reaction diagram Show all sequences 1.13.12.5Renilla-type luciferase biotechnology an advanced Fc-binding probe, FcUni-RLuc, is produced and functionally assayed for labelling IgGs. The Fc antibody binding sequence HWRGWV is fused to Renilla luciferase, and the purified probe is employed for bioluminescence enzyme-linked immunoabsorbance assay of Her2 positive cells
Display the word mapDisplay the reaction diagram Show all sequences 1.1.1.14920alpha-hydroxysteroid dehydrogenase biotechnology an aldo-keto reductases-dependent whole-cell biotransformation process is established that can be used for production of human aldo-keto reductases metabolites on a large scale
Show all pathways known for 2.6.1.18Display the word mapDisplay the reaction diagram Show all sequences 2.6.1.18beta-alanine-pyruvate transaminase biotechnology an alternative deracemization method for the efficient production of L-homoalanine using D-amino acid oxidase (vide infra) and omega-TA is proposed
Display the word mapDisplay the reaction diagram Show all sequences 1.4.3.11L-glutamate oxidase biotechnology an amperometric microbiosensor for real time monitoring L-glutamate release in neural tissue, based on enzymatic oxidation catalyzed by the L-glutamate oxidase is developed. By means of a sol-gel coating method, L-glutamate oxidase is entrapped in a biocompatible gel layer that provides a benign environment and retains enzyme activity on the surface of Pt microelectrode. Prior to gel layer formation, a modification on the surface of Pt microelectrode with poly(phenylene diamine) enables the microbiosensor screen majority of common potential interfering substances existing in physiological samples. The resulting L-glutamate microbiosensors are characterized by a fast response, high sensitivity, favourable selectivity and excellent long-term stability
Show all pathways known for 1.14.13.146Display the reaction diagram Show all sequences 1.14.13.146taxoid 14beta-hydroxylase biotechnology an antisense suppression approach, repressing the expression of the taxoid 14beta-hydroxlyase gene in yew cell cultures, is useful to inhibit the expression of other important genes in side-route of Taxol pathway and this may diverts the flow of taxadiene mainly towards Taxol
Show all pathways known for 2.7.2.11Display the word mapDisplay the reaction diagram Show all sequences 2.7.2.11glutamate 5-kinase biotechnology an artificial bifunctional enzyme, gamma-glutamyl kinase/gamma-glutamyl phosphate reductase, improves NaCl tolerance when expressed in Escherichia coli
Show all pathways known for 3.1.3.1Display the word mapDisplay the reaction diagram Show all sequences 3.1.3.1alkaline phosphatase biotechnology an assay is developed for determination of the activity of the ALP using the effect of enhancement of fluorescence of the europium(III)-tetracycline 3:1 complex (Eu(3)TC). Its luminescence, peaking at 616 nm if excited at 405 nm, is enhanced by a factor of 2.5 in the presence of phosphate. Phosphate coordinates to Eu(3)TC and enhances its luminescence intensity as a result of the displacement of water from the inner coordination sphere of the central metal. The assay is performed in a time-resolved (gated) mode, which is shown to yield larger signal changes than steady-state measurement of fluorescence. The limit of detection for ALP is 4 micromol/l. Based on this scheme, a model assay for theophylline as inhibitor for ALP is developed with a linear range from 14 to 68 micromol/l of theophylline
Display the word mapDisplay the reaction diagram Show all sequences 1.1.5.14fructose 5-dehydrogenase biotechnology an automated, enzymatic insulin assay is developed. Principle: Fructose is produced by the action of inulinase on inulin present in the sample. The resulting fructose reacts with D-fructose dehydrogenase in the presence of the oxidized form of 1-methoxy-5-methylphenazinium methylsulfate (1-m-PMS) to produce the reduced form of 1-m-PMS. Reduced 1-m-PMS acts on dissolved oxygen to produce hydrogen peroxide, which, through the action of peroxidase, oxidatively condenses N-ethyl-N-(2-hydroxy-3-sulfopropyl)-m-toluidine and 4-aminoantipyrine to transform them into quinoneimine dye. The absorbance of the quinoneimine dye is measured spectrophotometrically to determine the concentration of inulin in the sample. The new enzymatic assay offers a more convenient and more accurate measurement of inulin and may be suitable for routine procedures by automated analyzers in clinical laboratories
Show all pathways known for 1.4.1.9Display the word mapDisplay the reaction diagram Show all sequences 1.4.1.9leucine dehydrogenase biotechnology an efficient stereospecific enzymatic synthesis of L-valine, L-leucine, L-norvaline, L-norleucine and L-isoleucine from the corresponding alpha-keto acids by coupling the reactions catalysed by leucine dehydrogenase and glucose dehydrogenase/galactose mutarotase. Giving high yields of L-amino acids, the procedure is economical and easy to perform and to monitor at a synthetically useful scale (1-10 g)
Show all pathways known for 2.6.1.1Display the word mapDisplay the reaction diagram Show all sequences 2.6.1.1aspartate transaminase biotechnology an enzymatic method for the synthesis of the amino acid Phe is developed. AAT from porcine heart is immobilized by covalent attachment and entrapment, and the resulting immobilized preparations are compared to the soluble enzyme both in terms of stability and reaction efficiency
Display the word mapDisplay the reaction diagram Show all sequences 2.3.1.122trehalose O-mycolyltransferase biotechnology an enzyme assay using the natural substrate trehalose dimycolate is developed. The colorimetric assay is based on the quantification of glucose from the degradation of trehalose, which is the product from catalytic activity of antigen 85A. This assay is suitable for robust high-throughput screening (HTS) for compound library screening against mycolyltransferase. The assay has a very low coefficient of variance (0.04) in 96-well plates and shows a Z' factor of 0.67-0.73, indicating the robustness of the assay
Show all pathways known for 5.1.1.10Display the word mapDisplay the reaction diagram Show all sequences 5.1.1.10amino-acid racemase biotechnology an enzyme lyophilisate of amino acid racemase from Pseudomonas putida is used for in situ racemization. Crystallization experiments accompanied by enzymatic racemization lead to a significant increase of crystallized L-Asn
Show all pathways known for 5.3.3.2Display the word mapDisplay the reaction diagram Show all sequences 5.3.3.2isopentenyl-diphosphate DELTA-isomerase biotechnology an Escherichia coli strain is engineered for isoprenoid ether lipid biosynthesis through digeranylgeranylglycerylphosphate, DGGGP
Display the word mapDisplay the reaction diagram Show all sequences 2.3.1.183phosphinothricin acetyltransferase biotechnology an improved transformation method for biocontrol agent, Beauveria bassiana, is developed
Show all pathways known for 4.2.1.104Display the word mapDisplay the reaction diagram Show all sequences 4.2.1.104cyanase biotechnology analysis of strain characteristics for biotechnological application, detoxification of cyanide- or thiocyanate-containing soils and industrial effluents
Show all pathways known for 3.1.3.37Display the word mapDisplay the reaction diagram Show all sequences 3.1.3.37sedoheptulose-bisphosphatase biotechnology antisense transgenic plants, in mature, fully expanded leaves, enzyme activity is closely related with photosynthetic capacity, in youngest leaves, photosynthetic rates are close to or higher than those of wild type plants, decreased enzymic activity also leads to reduction in carbohydrate levels, particularly in starch
Display the reaction diagram Show all sequences 1.1.1.275(+)-trans-carveol dehydrogenase biotechnology applicability of strains with high enzyme content or recombinant overproducing strains for production of (+)-carvone, which is used as a flavor compound
Show all pathways known for 1.1.5.2Display the word mapDisplay the reaction diagram Show all sequences 1.1.5.2glucose 1-dehydrogenase (PQQ, quinone) biotechnology application as biosensor
Display the word mapDisplay the reaction diagram Show all sequences 1.1.99.35soluble quinoprotein glucose dehydrogenase biotechnology application as biosensor. Application for glucose sensing. s-GDH can be applied for the ultrasensitive detection of PQQ down to picomolar concentrations
Display the word mapDisplay the reaction diagram Show all sequences 2.7.1.78polynucleotide 5'-hydroxyl-kinase biotechnology application in DNA and RNA sequencing
Display the word mapDisplay the reaction diagram Show all sequences 4.2.2.2pectate lyase biotechnology application of a commercial pectinase for a range of concentrations and treatment times creates pectin-free textiles with low wax content. Assessment of physicochemical properties such as, wettability, whiteness index, polymerization degree, crystallinity index, color depth, as well as low-stress mechanical properties, proves that bioscouring can be as much efficient as the conventional alkaline treatment
Display the word mapDisplay the reaction diagram Show all sequences 2.7.7.B22transposase biotechnology application of a hyperactive transposase variant to generate mutants with integrated genes for the expression of the superfolder green fluorescent protein gene or a 2-ketodecarboxylase gene in Acidithiobacillus ferrooxidans, which enables the production and secretion of isobutyric acid. An inverse PCR method identifies the insertion sites of the 2-ketodecarboxylase gene, i.e. functional exogenous metabolic genes have been chromosomally integrated
Display the word mapDisplay the reaction diagram Show all sequences 1.17.99.2ethylbenzene hydroxylase biotechnology application of artificial neural networks for prediction of reaction kinetics
Display the word mapDisplay the reaction diagram Show all sequences 1.4.3.11L-glutamate oxidase biotechnology application of L-glutamate oxidase with catalase (KatE) to whole-cell systems for glutaric acid production in Escherichia coli. The 2-oxoglutarate regeneration system has potential for improving production in various aminotransferase systems
Display the word mapDisplay the reaction diagram Show all sequences 1.20.1.1phosphonate dehydrogenase biotechnology application of mutant Q137R/I150F/Q215L/R275Q/L276Q/A319E/V315A/Q132R/V71I/E130K/I313L/A325V/A176R for regeneration of NADPH in xylose reductase-catalyzed xylitol synthesis and alcohol dehydrogenase-catalyzed (R)-phenylethanol synthesis. comparison of enzyme with commercial Pseudomonas sp. formate dehydrogenase. Mutant Q137R/I150F/Q215L/R275Q/L276Q/A319E/V315A/Q132R/V71I/E130K/I313L/A325V/A176R shows higher substrate conversion and higher total turnover numbers for NADP+ than formate dehydrogenase
Display the word mapDisplay the reaction diagram Show all sequences 1.4.1.20phenylalanine dehydrogenase biotechnology application of the immobilised mutant enzyme N145A that is remarkably robust, even in the presence of high concentrations of polar or non-polar organic solvents such as acetone, methanol, n-hexane, toluene and methylene chloride in the synthesis of p-NO2-phenylalanine from the poorly water-soluble p-NO2-phenylpyruvic acid. 100% stereoselectivity
Display the word mapDisplay the reaction diagram Show all sequences 2.4.1.4amylosucrase biotechnology arbutin as a safe hydroquinone derivative is one of most important skin-whitening ingredients including beta-arbutin and alpha-arbutin. The batch-feeding whole-cell biocatalysis by Amy-1 is a promising technology for alpha-arbutin production with enhanced yield and molar conversion rate
Show all pathways known for 3.2.1.54Display the word mapDisplay the reaction diagram Show all sequences 3.2.1.54cyclomaltodextrinase biotechnology Archaeoglobus fulgidus utilizes an unusual pathway of starch degradation involving cyclodextrins as intermediates, extracellular cyclodextrins are transported into the cell and linearized via a CDase
Display the word mapDisplay the reaction diagram Show all sequences 3.2.1.147thioglucosidase biotechnology Aspergillus sp. NR463U4 maintains constant myrosinase production for 8 months. High production and prolonged stability of myrosinase demonstrates that this mutant could be a candidate for industrial application
Display the word mapDisplay the reaction diagram Show all sequences 2.7.7.19polynucleotide adenylyltransferase biotechnology assay in microtiter format
Display the reaction diagram Show all sequences 4.2.1.135UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining) biotechnology assay targets enzymes involved in the biosynthesis of the unusual bacterial sugar diNAcBac and the transfer of diNAcBac-phosphate to UndP. This multienzyme assay, together with the established assays for the individual enzymes, can be used to screen for inhibitors, and may be used to evaluate substrate flux along the inhibited pathway. This assay is optimized for maximum sensitivity to inhibition of PglF, PglE, PglD, and PglC by balancing the enzyme concentrations such that each is partially rate determining
Show all pathways known for 2.7.4.1Display the word mapDisplay the reaction diagram Show all sequences 2.7.4.1ATP-polyphosphate phosphotransferase biotechnology ATP supply for synthesis of D-amino acid dipeptides
Display the word mapDisplay the reaction diagram Show all sequences 3.4.21.B48kumamolysin biotechnology attractive candidate for industrial-scale biopeptide production under thermoacidophilic conditions
Show all pathways known for 1.1.1.47Display the word mapDisplay the reaction diagram Show all sequences 1.1.1.47glucose 1-dehydrogenase [NAD(P)+] biotechnology azoreductase and glucose 1-dehydrogenase are coupled for both continuous generation of the cofactor NADH and azo dye removal. The results show that 85% maximum relative activity of azoreductase in an integrated enzyme system is obtained at the conditions: 1 U azoreductase: 10 U glucose 1-dehydrogenase, 250 mM glucose, 1.0 mM NAD+ and 150 microM methyl red
Display the word mapDisplay the reaction diagram Show all sequences 4.6.1.22Bacillus subtilis ribonuclease biotechnology bacisubin is an antifungal protein
Display the word mapDisplay the reaction diagram Show all sequences 3.1.1.81quorum-quenching N-acyl-homoserine lactonase biotechnology bacteria harboring the qsdA gene interfere very efficiently with quorum-sensing-regulated functions, demonstrating that qsdA is a valuable tool for developing quorum-quenching procedures
Display the word mapDisplay the reaction diagram Show all sequences 3.4.24.B24L-alanine-D-glutamate endopeptidase biotechnology bacteriophage peptidoglycan-hydrolyzing enzymes have found several applications in biotechnology and medicine, e.g. for surface-decontamination purposes, for biopreservation of food and feed and as potential topical antimicrobials
Display the word mapDisplay the reaction diagram Show all sequences 1.1.3.4glucose oxidase biotechnology bacteriostatic agent. The combination of different concentrations of glucose oxidase and glucose could significantly inhibit the growth of Agrobacterium and Escherichia coli in logarithmic phase during the fermentation process
Show all pathways known for 1.2.1.8Display the word mapDisplay the reaction diagram Show all sequences 1.2.1.8betaine-aldehyde dehydrogenase biotechnology BADH overexpression in maize is beneficial for drought tolerance and the three transgenic maize lines can be used for further breeding experiments. The agronomic traits of transgenic maize are not affected by the overexpression of BADH
Display the word mapDisplay the reaction diagram Show all sequences 3.2.1.39glucan endo-1,3-beta-D-glucosidase biotechnology beta-1,3-glucanases may be useful in fungal transformations or other biotechnological applications where low-temperature cell wall disintegration is preferred
Display the word mapDisplay the reaction diagram Show all sequences 3.2.1.39glucan endo-1,3-beta-D-glucosidase biotechnology BglS27 is a good candidate for utilization in biotechnological applications such as plant protection, feed, and food preservation
Show all pathways known for 3.1.3.37Display the word mapDisplay the reaction diagram Show all sequences 3.1.3.37sedoheptulose-bisphosphatase biotechnology bifunctional fructose-1,6/seduheptulose-1,7-bisphosphatase expressed in Nicotiana tabacum, plants show enhanced photosynthetic efficiency and growth characteristics as well as higher photosynthetic CO2 fixation and more final dry matter
Display the word mapDisplay the reaction diagram Show all sequences 3.2.1.78mannan endo-1,4-beta-mannosidase biotechnology bio-bleaching for kraft pulp production
Show all pathways known for 1.14.13.22Display the word mapDisplay the reaction diagram Show all sequences 1.14.13.22cyclohexanone monooxygenase biotechnology biocatalysis system for Baeyer-Villiger oxidations, the average specific oxidation rate and product molar yield based on reaction substrate reaches 0.15 g/g dry cells/h (21.9 micromol/min/g of dry cells), at high cell densities (20 g dry cells/l) the specific product formation rate is lower with 0.12 g/g dry cells/h and 17.5 micromol/min/g of dry cells (probably due to low availability of the energy source glucose), though absolute yield is 2fold higher
Display the word mapDisplay the reaction diagram Show all sequences 1.1.3.6cholesterol oxidase biotechnology biocatalysis, industrial steroid drug production, steroid production as diagnostic tool
Display the word mapDisplay the reaction diagram Show all sequences 1.1.3.10pyranose oxidase biotechnology biocatalyst for carbohydrate transformations toward higher-value products
Show all pathways known for 3.1.1.3Display the word mapDisplay the reaction diagram Show all sequences 3.1.1.3triacylglycerol lipase biotechnology biocatalytic surfactant production, for example the synthesis of myristyl myristate.
Display the word mapDisplay the reaction diagram Show all sequences 1.8.3.7formylglycine-generating enzyme biotechnology bioconjugation chemistry, formylglycine-generating enzymes catalyze the site-specific oxidation of a cysteine residue to the aldehyde-containing amino acid Ca-formylglycine (FGly). This noncanonical residue can be generated within any desired target protein and can subsequently be used for bioorthogonal conjugation reactions
Display the word mapDisplay the reaction diagram Show all sequences 3.2.1.11dextranase biotechnology bioconversion, modification of alternan
Show all pathways known for 1.14.15.1Display the word mapDisplay the reaction diagram Show all sequences 1.14.15.1camphor 5-monooxygenase biotechnology bioengineered Escherichia coli cells possess a heterologous self-sufficient P450 catalytic system that may have advantages in terms of low cost and high yield for the production of fine chemicals
Show all pathways known for 1.1.5.2Display the word mapDisplay the reaction diagram Show all sequences 1.1.5.2glucose 1-dehydrogenase (PQQ, quinone) biotechnology bioengineering of water-soluble isozyme PQQGDH-B production at industrial level
Show all pathways known for 3.8.1.8Display the word mapDisplay the reaction diagram Show all sequences 3.8.1.8atrazine chlorohydrolase biotechnology bioremediation
Show all pathways known for 1.1.99.18Display the word mapDisplay the reaction diagram Show all sequences 1.1.99.18cellobiose dehydrogenase (acceptor) biotechnology biosensors with a cellulosic carrier containing self-assembled nanocomposites of CDH and other enzymes allow the determination of 100 nm dopamine
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