Any feedback?
Please rate this page
(literature.php)
(0/150)

BRENDA support

Literature summary extracted from

  • Sato, T.; Kouda, M.; Hoshino, T.
    Site-directed mutagenesis experiments on the putative deprotonation site of squalene-hopene cyclase from Alicyclobacillus acidocaldarius (2004), Biosci. Biotechnol. Biochem., 68, 728-738.
    View publication on PubMed

Cloned(Commentary)

EC Number Cloned (Comment) Organism
5.4.99.17 expression in Escherichia coli BL21 Alicyclobacillus acidocaldarius

Protein Variants

EC Number Protein Variants Comment Organism
4.2.1.129 E45A production of hop-22(29)-ene is less throughout the entire temperature range than that by the wild-type. Hop-21(22)ene is not produced Alicyclobacillus acidocaldarius
4.2.1.129 E93A production of hop-22(29)-ene is less throughout the entire temperature range than that by the wild-type. Hop-21(22)ene is not produced Alicyclobacillus acidocaldarius
4.2.1.129 F434A production of hop-22(29)-ene is decreased, production of hopanol is markedly increased at lower temperatures Alicyclobacillus acidocaldarius
4.2.1.129 F437A production of hop-22(29)-ene is decreased, production of hopanol is markedly increased at lower temperatures Alicyclobacillus acidocaldarius
4.2.1.129 G262A the mutant produces hopanol as the main product instead of hop-22(29)-ene. The mutant also produces hop-21(22)ene Alicyclobacillus acidocaldarius
4.2.1.129 P263A the mutant produces hopanol as the main product instead of hop-22(29)-ene. The mutant also produces hop-21(22)ene Alicyclobacillus acidocaldarius
4.2.1.129 P263G the mutant produces hopanol as the main product instead of hop-22(29)-ene. The mutant also produces hop-21(22)ene Alicyclobacillus acidocaldarius
4.2.1.129 Q262G the mutant produces hopanol as the main product instead of hop-22(29)-ene. The mutant also produces hop-21(22)ene Alicyclobacillus acidocaldarius
4.2.1.129 R127Q production of hop-22(29)-ene is less throughout the entire temperature range than that by the wild-type. Hop-21(22)ene is not produced Alicyclobacillus acidocaldarius
4.2.1.129 T41A production of hop-22(29)-ene is less throughout the entire temperature range than that by the wild-type. Hop-21(22)ene is not produced Alicyclobacillus acidocaldarius
4.2.1.129 W133A production of hop-22(29)-ene is less throughout the entire temperature range than that by the wild-type. Hop-21(22)ene is not produced Alicyclobacillus acidocaldarius
4.2.1.129 Y267A production of hop-22(29)-ene is decreased, production of hopanol is markedly increased at lower temperatures Alicyclobacillus acidocaldarius
5.4.99.17 E45A mutation located around the "back waters" Alicyclobacillus acidocaldarius
5.4.99.17 E45A production of hop-22(29)-ene is less throughout the entire temperature range than that by the wild-type. Hop-21(22)ene is not produced Alicyclobacillus acidocaldarius
5.4.99.17 E93A mutation located around the "back waters" Alicyclobacillus acidocaldarius
5.4.99.17 E93A production of hop-22(29)-ene is less throughout the entire temperature range than that by the wild-type. Hop-21(22)ene is not produced Alicyclobacillus acidocaldarius
5.4.99.17 F434A mutation near the substrat channel Alicyclobacillus acidocaldarius
5.4.99.17 F434A production of hop-22(29)-ene is decreased, production of hopanol is markedly increased at lower temperatures Alicyclobacillus acidocaldarius
5.4.99.17 F437A mutation near the substrat channel Alicyclobacillus acidocaldarius
5.4.99.17 F437A production of hop-22(29)-ene is decreased, production of hopanol is markedly increased at lower temperatures Alicyclobacillus acidocaldarius
5.4.99.17 G262A the mutant produces hopanol as the main product instead of hop-22(29)-ene. The mutant also produces hop-21(22)ene Alicyclobacillus acidocaldarius
5.4.99.17 P263A mutation located between C29 of the hopanyl cation and the "front water" Alicyclobacillus acidocaldarius
5.4.99.17 P263A the mutant produces hopanol as the main product instead of hop-22(29)-ene. The mutant also produces hop-21(22)ene Alicyclobacillus acidocaldarius
5.4.99.17 P263G mutation located between C29 of the hopanyl cation and the "front water" Alicyclobacillus acidocaldarius
5.4.99.17 P263G the mutant produces hopanol as the main product instead of hop-22(29)-ene. The mutant also produces hop-21(22)ene Alicyclobacillus acidocaldarius
5.4.99.17 Q262A mutation located between C29 of the hopanyl cation and the "front water" Alicyclobacillus acidocaldarius
5.4.99.17 Q262G mutation located between C29 of the hopanyl cation and the "front water" Alicyclobacillus acidocaldarius
5.4.99.17 Q262G the mutant produces hopanol as the main product instead of hop-22(29)-ene. The mutant also produces hop-21(22)ene Alicyclobacillus acidocaldarius
5.4.99.17 R127Q mutation located around the "back waters" Alicyclobacillus acidocaldarius
5.4.99.17 R127Q production of hop-22(29)-ene is less throughout the entire temperature range than that by the wild-type. Hop-21(22)ene is not produced Alicyclobacillus acidocaldarius
5.4.99.17 T41A mutation located around the "back waters" Alicyclobacillus acidocaldarius
5.4.99.17 T41A production of hop-22(29)-ene is less throughout the entire temperature range than that by the wild-type. Hop-21(22)ene is not produced Alicyclobacillus acidocaldarius
5.4.99.17 W133A mutation located around the "back waters" Alicyclobacillus acidocaldarius
5.4.99.17 W133A production of hop-22(29)-ene is less throughout the entire temperature range than that by the wild-type. Hop-21(22)ene is not produced Alicyclobacillus acidocaldarius
5.4.99.17 Y267A mutation near the substrat channel Alicyclobacillus acidocaldarius
5.4.99.17 Y267A production of hop-22(29)-ene is decreased, production of hopanol is markedly increased at lower temperatures Alicyclobacillus acidocaldarius

KM Value [mM]

EC Number KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
4.2.1.129 0.0162
-
squalene pH 6.0, 45°C, wild-type enzyme Alicyclobacillus acidocaldarius
4.2.1.129 0.0167
-
squalene pH 6.0, 45°C, mutant T41A Alicyclobacillus acidocaldarius
4.2.1.129 0.0169
-
squalene pH 6.0, 45°C, mutant W133A Alicyclobacillus acidocaldarius
4.2.1.129 0.0189
-
squalene pH 6.0, 45°C, mutant E93A Alicyclobacillus acidocaldarius
4.2.1.129 0.0213
-
squalene pH 6.0, 45°C, mutant E45A Alicyclobacillus acidocaldarius
4.2.1.129 0.0255
-
squalene pH 6.0, 45°C, mutant R127Q Alicyclobacillus acidocaldarius
4.2.1.129 0.0816
-
squalene pH 6.0, 45°C, mutant F434A Alicyclobacillus acidocaldarius
4.2.1.129 0.0955
-
squalene pH 6.0, 45°C, mutant F437A Alicyclobacillus acidocaldarius
4.2.1.129 0.102
-
squalene pH 6.0, 45°C, mutant Q262A Alicyclobacillus acidocaldarius
4.2.1.129 0.156
-
squalene pH 6.0, 45°C, mutant Q262G Alicyclobacillus acidocaldarius
4.2.1.129 0.185
-
squalene pH 6.0, 45°C, mutant P263A Alicyclobacillus acidocaldarius
4.2.1.129 0.197
-
squalene pH 6.0, 45°C, mutant Y267A Alicyclobacillus acidocaldarius
4.2.1.129 0.237
-
squalene pH 6.0, 45°C, mutant P263G Alicyclobacillus acidocaldarius
5.4.99.17 0.0162
-
squalene wild-type, 45°C, pH 6.0 Alicyclobacillus acidocaldarius
5.4.99.17 0.0162
-
squalene pH 6.0, 45°C, wild-type enzyme Alicyclobacillus acidocaldarius
5.4.99.17 0.0167
-
squalene mutant T41A, 45°C, pH 6.0 Alicyclobacillus acidocaldarius
5.4.99.17 0.0167
-
squalene pH 6.0, 45°C, mutant T41A Alicyclobacillus acidocaldarius
5.4.99.17 0.0169
-
squalene mutant W133A, 45°C, pH 6.0 Alicyclobacillus acidocaldarius
5.4.99.17 0.0169
-
squalene pH 6.0, 45°C, mutant W133A Alicyclobacillus acidocaldarius
5.4.99.17 0.0189
-
squalene mutant E93A, 45°C, pH 6.0 Alicyclobacillus acidocaldarius
5.4.99.17 0.0189
-
squalene pH 6.0, 45°C, mutant E93A Alicyclobacillus acidocaldarius
5.4.99.17 0.0213
-
squalene mutant E45A, 45°C, pH 6.0 Alicyclobacillus acidocaldarius
5.4.99.17 0.0213
-
squalene pH 6.0, 45°C, mutant E45A Alicyclobacillus acidocaldarius
5.4.99.17 0.0255
-
squalene mutant R127Q, 45°C, pH 6.0 Alicyclobacillus acidocaldarius
5.4.99.17 0.0255
-
squalene pH 6.0, 45°C, mutant R127Q Alicyclobacillus acidocaldarius
5.4.99.17 0.0816
-
squalene pH 6.0, 45°C, mutant F434A Alicyclobacillus acidocaldarius
5.4.99.17 0.0955
-
squalene pH 6.0, 45°C, mutant F437A Alicyclobacillus acidocaldarius
5.4.99.17 0.102
-
squalene mutant Q262A, 45°C, pH 6.0 Alicyclobacillus acidocaldarius
5.4.99.17 0.102
-
squalene pH 6.0, 45°C, mutant Q262A Alicyclobacillus acidocaldarius
5.4.99.17 0.156
-
squalene mutant Q262G, 45°C, pH 6.0 Alicyclobacillus acidocaldarius
5.4.99.17 0.156
-
squalene pH 6.0, 45°C, mutant Q262G Alicyclobacillus acidocaldarius
5.4.99.17 0.185
-
squalene mutant P263A, 45°C, pH 6.0 Alicyclobacillus acidocaldarius
5.4.99.17 0.185
-
squalene pH 6.0, 45°C, mutant P263A Alicyclobacillus acidocaldarius
5.4.99.17 0.197
-
squalene mutantY267A, 45°C, pH 6.0 Alicyclobacillus acidocaldarius
5.4.99.17 0.197
-
squalene pH 6.0, 45°C, mutant Y267A Alicyclobacillus acidocaldarius
5.4.99.17 0.237
-
squalene mutant P263G, 45°C, pH 6.0 Alicyclobacillus acidocaldarius
5.4.99.17 0.237
-
squalene pH 6.0, 45°C, mutant P263G Alicyclobacillus acidocaldarius
5.4.99.17 0.816
-
squalene mutant F434A, 45°C, pH 6.0 Alicyclobacillus acidocaldarius
5.4.99.17 0.955
-
squalene mutant F437A, 45°C, pH 6.0 Alicyclobacillus acidocaldarius

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
5.4.99.17 squalene Alicyclobacillus acidocaldarius
-
hop-22(29)-ene
-
?

Organism

EC Number Organism UniProt Comment Textmining
4.2.1.129 Alicyclobacillus acidocaldarius
-
-
-
5.4.99.17 Alicyclobacillus acidocaldarius
-
-
-

Purification (Commentary)

EC Number Purification (Comment) Organism
5.4.99.17
-
Alicyclobacillus acidocaldarius

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4.2.1.129 hopan-22-ol
-
Alicyclobacillus acidocaldarius squalene + H2O
-
?
5.4.99.17 squalene
-
Alicyclobacillus acidocaldarius hop-22(29)-ene
-
?
5.4.99.17 squalene two types of water molecules ("front water" and "back waters") are involved around the deprotonation site. The two residues of Gln262 and Pro263 probably work to keep away the isopropyl group of the hopanyl cation intermediate from the "front water molecule", that is, to place the "front water" in a favorable position, leading to the minimal production of by-products, i.e., hopanol and hop-21(22)-ene. The five residues of Thr41, Glu45, Glu93, Arg127 and Trp133, by which the hydrogen-bonded network incorporating the "back waters" is constructed, increase the polarization of the "front water" to facilitate proton elimination from the isopropyl moiety of the hopanyl cation, leading to the normal product, hop-22(29)-ene Alicyclobacillus acidocaldarius hop-22(29)-ene
-
?

Synonyms

EC Number Synonyms Comment Organism
4.2.1.129 squalene-hopene cyclase ambiguous Alicyclobacillus acidocaldarius
5.4.99.17 SHC
-
Alicyclobacillus acidocaldarius
5.4.99.17 squalene-hopene cyclase
-
Alicyclobacillus acidocaldarius

Temperature Optimum [°C]

EC Number Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
4.2.1.129 35 50 mutant Q262G Alicyclobacillus acidocaldarius
4.2.1.129 45
-
mutant F437A Alicyclobacillus acidocaldarius
4.2.1.129 45 55 mutant Q262A Alicyclobacillus acidocaldarius
4.2.1.129 50
-
mutant P263G, mutant P263A, mutant E45A, mutant R127Q Alicyclobacillus acidocaldarius
4.2.1.129 50 60 mutant Y267A Alicyclobacillus acidocaldarius
4.2.1.129 55
-
mutant E93A, mutant W133A Alicyclobacillus acidocaldarius
4.2.1.129 60
-
wild-type, mutant T41A, mutant F434A Alicyclobacillus acidocaldarius
5.4.99.17 35 50 mutant Q262G Alicyclobacillus acidocaldarius
5.4.99.17 45
-
mutant F437A0 Alicyclobacillus acidocaldarius
5.4.99.17 45
-
mutant F437A Alicyclobacillus acidocaldarius
5.4.99.17 45 55 mutant Q262A Alicyclobacillus acidocaldarius
5.4.99.17 50
-
mutant E45A Alicyclobacillus acidocaldarius
5.4.99.17 50
-
mutant P263A Alicyclobacillus acidocaldarius
5.4.99.17 50
-
mutant P263G Alicyclobacillus acidocaldarius
5.4.99.17 50
-
mutant R127Q Alicyclobacillus acidocaldarius
5.4.99.17 50
-
mutant P263G, mutant P263A, mutant E45A, mutant R127Q Alicyclobacillus acidocaldarius
5.4.99.17 50 60 mutantY267A Alicyclobacillus acidocaldarius
5.4.99.17 50 60 mutant Y267A Alicyclobacillus acidocaldarius
5.4.99.17 55
-
mutant E93A Alicyclobacillus acidocaldarius
5.4.99.17 55
-
mutant W133A Alicyclobacillus acidocaldarius
5.4.99.17 55
-
mutant E93A, mutant W133A Alicyclobacillus acidocaldarius
5.4.99.17 60
-
wild-type Alicyclobacillus acidocaldarius
5.4.99.17 60
-
mutant F434A Alicyclobacillus acidocaldarius
5.4.99.17 60
-
mutant T41A Alicyclobacillus acidocaldarius
5.4.99.17 60
-
wild-type, mutant T41A, mutant F434A Alicyclobacillus acidocaldarius

Turnover Number [1/s]

EC Number Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
4.2.1.129 0.15
-
squalene pH 6.0, 45°C, mutant F434A Alicyclobacillus acidocaldarius
4.2.1.129 0.163
-
squalene pH 6.0, 45°C, mutant T41A Alicyclobacillus acidocaldarius
4.2.1.129 0.163
-
squalene pH 6.0, 45°C, wild-type enzyme Alicyclobacillus acidocaldarius
4.2.1.129 0.17
-
squalene pH 6.0, 45°C, mutant E93A Alicyclobacillus acidocaldarius
4.2.1.129 0.19
-
squalene pH 6.0, 45°C, mutant W133A Alicyclobacillus acidocaldarius
4.2.1.129 0.21
-
squalene pH 6.0, 45°C, mutant R127Q Alicyclobacillus acidocaldarius
4.2.1.129 0.21
-
squalene pH 6.0, 45°C, mutant Y267A Alicyclobacillus acidocaldarius
4.2.1.129 0.22
-
squalene pH 6.0, 45°C, mutant E45A Alicyclobacillus acidocaldarius
4.2.1.129 0.49
-
squalene pH 6.0, 45°C, mutant F437A Alicyclobacillus acidocaldarius
4.2.1.129 2.03
-
squalene pH 6.0, 45°C, mutant Q262A Alicyclobacillus acidocaldarius
4.2.1.129 3.78
-
squalene pH 6.0, 45°C, mutant P263A Alicyclobacillus acidocaldarius
4.2.1.129 3.86
-
squalene pH 6.0, 45°C, mutant P263G Alicyclobacillus acidocaldarius
4.2.1.129 4.4
-
squalene pH 6.0, 45°C, mutant Q262G Alicyclobacillus acidocaldarius
5.4.99.17 0.345
-
squalene pH 6.0, 45°C, mutant E45A Alicyclobacillus acidocaldarius
5.4.99.17 0.353
-
squalene pH 6.0, 45°C, mutant E93A Alicyclobacillus acidocaldarius
5.4.99.17 0.448
-
squalene pH 6.0, 45°C, mutant R127Q Alicyclobacillus acidocaldarius
5.4.99.17 0.54
-
squalene pH 6.0, 45°C, mutant F434A Alicyclobacillus acidocaldarius
5.4.99.17 0.62
-
squalene pH 6.0, 45°C, mutant W133A Alicyclobacillus acidocaldarius
5.4.99.17 0.64
-
squalene pH 6.0, 45°C, mutant Y267A Alicyclobacillus acidocaldarius
5.4.99.17 0.735
-
squalene pH 6.0, 45°C, mutant T41A Alicyclobacillus acidocaldarius
5.4.99.17 0.86
-
squalene pH 6.0, 45°C, wild-type enzyme Alicyclobacillus acidocaldarius
5.4.99.17 1.03
-
squalene pH 6.0, 45°C, mutant F437A Alicyclobacillus acidocaldarius
5.4.99.17 1.06
-
squalene pH 6.0, 45°C, mutant P263G Alicyclobacillus acidocaldarius
5.4.99.17 1.09
-
squalene pH 6.0, 45°C, mutant P263A Alicyclobacillus acidocaldarius
5.4.99.17 1.21
-
squalene pH 6.0, 45°C, mutant Q262A Alicyclobacillus acidocaldarius
5.4.99.17 1.37
-
squalene pH 6.0, 45°C, mutant Q262G Alicyclobacillus acidocaldarius

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
4.2.1.129 6
-
assay at Alicyclobacillus acidocaldarius
5.4.99.17 6
-
assay at Alicyclobacillus acidocaldarius

kcat/KM [mM/s]

EC Number kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
4.2.1.129 1.07
-
squalene pH 6.0, 45°C, mutant Y267A Alicyclobacillus acidocaldarius
4.2.1.129 1.84
-
squalene pH 6.0, 45°C, mutant F434A Alicyclobacillus acidocaldarius
4.2.1.129 5.13
-
squalene pH 6.0, 45°C, mutant F437A Alicyclobacillus acidocaldarius
4.2.1.129 8.24
-
squalene pH 6.0, 45°C, mutant R127Q Alicyclobacillus acidocaldarius
4.2.1.129 8.99
-
squalene pH 6.0, 45°C, mutant E93A Alicyclobacillus acidocaldarius
4.2.1.129 9.8
-
squalene pH 6.0, 45°C, mutant T41A Alicyclobacillus acidocaldarius
4.2.1.129 10.06
-
squalene pH 6.0, 45°C, wild-type enzyme Alicyclobacillus acidocaldarius
4.2.1.129 11.2
-
squalene pH 6.0, 45°C, mutant W133A Alicyclobacillus acidocaldarius
4.2.1.129 16.3
-
squalene pH 6.0, 45°C, mutant P263G Alicyclobacillus acidocaldarius
4.2.1.129 19.9
-
squalene pH 6.0, 45°C, mutant Q262A Alicyclobacillus acidocaldarius
4.2.1.129 20.4
-
squalene pH 6.0, 45°C, mutant E45A Alicyclobacillus acidocaldarius
4.2.1.129 20.43
-
squalene pH 6.0, 45°C, mutant P263A Alicyclobacillus acidocaldarius
4.2.1.129 28.2
-
squalene pH 6.0, 45°C, mutant Q262G Alicyclobacillus acidocaldarius
5.4.99.17 3.2
-
squalene pH 6.0, 45°C, mutant Y267A Alicyclobacillus acidocaldarius
5.4.99.17 4.5
-
squalene pH 6.0, 45°C, mutant P263G Alicyclobacillus acidocaldarius
5.4.99.17 5.9
-
squalene pH 6.0, 45°C, mutant P263A Alicyclobacillus acidocaldarius
5.4.99.17 6.6
-
squalene pH 6.0, 45°C, mutant F434A Alicyclobacillus acidocaldarius
5.4.99.17 8.8
-
squalene pH 6.0, 45°C, mutant Q262G Alicyclobacillus acidocaldarius
5.4.99.17 10.8
-
squalene pH 6.0, 45°C, mutant F437A Alicyclobacillus acidocaldarius
5.4.99.17 11.9
-
squalene pH 6.0, 45°C, mutant Q262A Alicyclobacillus acidocaldarius
5.4.99.17 16.1
-
squalene pH 6.0, 45°C, mutant E45A Alicyclobacillus acidocaldarius
5.4.99.17 17.6
-
squalene pH 6.0, 45°C, mutant R127Q Alicyclobacillus acidocaldarius
5.4.99.17 18.7
-
squalene pH 6.0, 45°C, mutant E93A Alicyclobacillus acidocaldarius
5.4.99.17 36.7
-
squalene pH 6.0, 45°C, mutant W133A Alicyclobacillus acidocaldarius
5.4.99.17 44
-
squalene pH 6.0, 45°C, mutant T41A Alicyclobacillus acidocaldarius
5.4.99.17 53.09
-
squalene pH 6.0, 45°C, wild-type enzyme Alicyclobacillus acidocaldarius