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Literature summary for 6.2.1.B3 extracted from
- Jasmonates meet fatty acids: functional analysis of a new acyl-coenzyme A synthetase family from Arabidopsis thaliana (2008), J. Exp. Bot., 59, 403-419.
KM Value [mM]
| KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
|---|---|---|---|---|---|
| 0.019 | - |
3-oxo-2-(2'-[Z]-pentenyl)cyclopentane-1-octanoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana |  |
| 0.027 | - |
12-oxo-phytodienoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
| 0.036 | - |
tetradecanoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
| 0.076 | - |
dinor-12-oxo-phytodienoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
| 0.094 | - |
3-oxo-2-(2'-[Z]-pentenyl)cyclopentane-1-hexanoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
Localization
| Localization | Comment | Organism | GeneOntology No. | Textmining |
|---|---|---|---|---|
| peroxisome | - |
Arabidopsis thaliana | 5777 | - |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Arabidopsis thaliana | Q84P21 | - |
- |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| 12-oxo-phytodienoic acid + CoA + ATP | - |
Arabidopsis thaliana | 12-oxo-phytodienoyl-CoA + AMP + diphosphate | - |
? | |
| 3-oxo-2-(2'-[Z]-pentenyl)cyclopentane-1-hexanoic acid + CoA + ATP | i.e. OPC-6:0 | Arabidopsis thaliana | 3-oxo-2-(2'-[Z]-pentenyl)cyclopentane-1-hexanoyl-CoA + AMP + diphosphate | - |
? | |
| 3-oxo-2-(2'-[Z]-pentenyl)cyclopentane-1-octanoic acid + CoA + ATP | i.e. OPC-8:0 | Arabidopsis thaliana | 3-oxo-2-(2'-[Z]-pentenyl)cyclopentane-1-octanoyl-CoA + AMP + diphosphate | - |
? | |
| decanoic acid + CoA + ATP | - |
Arabidopsis thaliana | decanoyl-CoA + AMP + diphosphate | - |
? | |
| dinor-12-oxo-phytodienoic acid + CoA + ATP | - |
Arabidopsis thaliana | dinor-12-oxo-phytodienoyl-CoA + AMP + diphosphate | - |
? | |
| dodecanoic acid + CoA + ATP | - |
Arabidopsis thaliana | dodecanoyl-CoA + AMP + diphosphate | - |
? | |
| hexadecanoic acid + CoA + ATP | - |
Arabidopsis thaliana | hexadecanoyl-CoA + AMP + diphosphate | - |
? | |
| octadecanoic acid + CoA + ATP | - |
Arabidopsis thaliana | octadecanoyl-CoA + AMP + diphosphate | - |
? | |
| oleic acid + CoA + ATP | - |
Arabidopsis thaliana | oleoyl-CoA + AMP + diphosphate | - |
? | |
| tetradecanoic acid + CoA + ATP | - |
Arabidopsis thaliana | tetradecanoyl-CoA + AMP + diphosphate | - |
? | |
Turnover Number [1/s]
| Turnover Number Minimum [1/s] | Turnover Number Maximum [1/s] | Substrate | Comment | Organism | Structure |
|---|---|---|---|---|---|
| 0.96 | - |
tetradecanoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
| 1.27 | - |
3-oxo-2-(2'-[Z]-pentenyl)cyclopentane-1-octanoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
| 1.49 | - |
3-oxo-2-(2'-[Z]-pentenyl)cyclopentane-1-hexanoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
| 1.56 | - |
12-oxo-phytodienoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
| 1.78 | - |
dinor-12-oxo-phytodienoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
Expression
| Organism | Comment | Expression |
|---|---|---|
| Arabidopsis thaliana | expression is activated in response to wounding or infection | up |
General Information
| General Information | Comment | Organism |
|---|---|---|
| physiological function | mutants exhibit 3-oxo-2(2'-[Z]-pentenyl)cyclopentane-1-octanoic acid accumulation and reduced levels of jasmonic acid. Enzyme catalyzes an essential step in jasmonic acid biosynthesis by initiating the beta-oxidative chain shortening of the carboxylic acid side chain of its precursors | Arabidopsis thaliana |
kcat/KM [mM/s]
| kcat/KM Value [1/mMs-1] | kcat/KM Value Maximum [1/mMs-1] | Substrate | Comment | Organism | Structure |
|---|---|---|---|---|---|
| 15.2 | - |
3-oxo-2-(2'-[Z]-pentenyl)cyclopentane-1-hexanoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
| 23.4 | - |
dinor-12-oxo-phytodienoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
| 26.4 | - |
tetradecanoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
| 56.2 | - |
12-oxo-phytodienoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
| 65.4 | - |
3-oxo-2-(2'-[Z]-pentenyl)cyclopentane-1-octanoic acid | pH not specified in the publication, temperature not specified in the publication | Arabidopsis thaliana | |
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