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Literature summary for 6.1.1.9 extracted from
- Basic faced alpha-helices are widespread in the peptide extensions of the eukaryotic aminoacyl-tRNA synthetases (2006), In Silico Biol., 6, 259-273.
Localization
| Localization | Comment | Organism | GeneOntology No. | Textmining |
|---|---|---|---|---|
| cytoplasm | - |
Saccharomyces cerevisiae | 5737 | - |
| cytoplasm | - |
Arabidopsis thaliana | 5737 | - |
| cytoplasm | - |
Homo sapiens | 5737 | - |
| cytoplasm | - |
Oryza sativa | 5737 | - |
| mitochondrion | - |
Saccharomyces cerevisiae | 5739 | - |
| mitochondrion | - |
Arabidopsis thaliana | 5739 | - |
| mitochondrion | - |
Oryza sativa | 5739 | - |
Natural Substrates/ Products (Substrates)
| Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| additional information | Saccharomyces cerevisiae | functional and evolutionary aspects of basic faced alpha helices, structural elements of aminoacyl-tRNA synthetases, overview | ? | - |
? |  |
| additional information | Arabidopsis thaliana | functional and evolutionary aspects of basic faced alpha helices, structural elements of aminoacyl-tRNA synthetases, overview | ? | - |
? | |
| additional information | Takifugu rubripes | functional and evolutionary aspects of basic faced alpha helices, structural elements of aminoacyl-tRNA synthetases, overview | ? | - |
? | |
| additional information | Homo sapiens | functional and evolutionary aspects of basic faced alpha helices, structural elements of aminoacyl-tRNA synthetases, overview | ? | - |
? | |
| additional information | Oryza sativa | functional and evolutionary aspects of basic faced alpha helices, structural elements of aminoacyl-tRNA synthetases, overview | ? | - |
? | |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Arabidopsis thaliana | P93736 | cytoplasmic valRS | - |
| Homo sapiens | P26640 | cytoplasmic valRS; gene VARS | - |
| Oryza sativa | Q851K9 | putative valyl tRNA synthetase, ValRSI | - |
| Saccharomyces cerevisiae | - |
- |
- |
| Takifugu rubripes | P49696 | - |
- |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| additional information | functional and evolutionary aspects of basic faced alpha helices, structural elements of aminoacyl-tRNA synthetases, overview | Saccharomyces cerevisiae | ? | - |
? | |
| additional information | functional and evolutionary aspects of basic faced alpha helices, structural elements of aminoacyl-tRNA synthetases, overview | Arabidopsis thaliana | ? | - |
? | |
| additional information | functional and evolutionary aspects of basic faced alpha helices, structural elements of aminoacyl-tRNA synthetases, overview | Takifugu rubripes | ? | - |
? | |
| additional information | functional and evolutionary aspects of basic faced alpha helices, structural elements of aminoacyl-tRNA synthetases, overview | Homo sapiens | ? | - |
? | |
| additional information | functional and evolutionary aspects of basic faced alpha helices, structural elements of aminoacyl-tRNA synthetases, overview | Oryza sativa | ? | - |
? | |
Subunits
| Subunits | Comment | Organism |
|---|---|---|
| More | the enzyme possesses N terminal alpha-helices with basic residues distributed asymmetrically, on a single face of the helix, termed basic faced alpha helices, BFAHs, which are unique to the aminoacyl-tRNA synthetases, structural analysis, determination of distribution of basic residues within protein secondary structure by Fourier analysis, functional and evolutionary aspects of these structural features, overview | Saccharomyces cerevisiae |
| More | the enzyme possesses N terminal alpha-helices with basic residues distributed asymmetrically, on a single face of the helix, termed basic faced alpha helices, BFAHs, which are unique to the aminoacyl-tRNA synthetases, structural analysis, determination of distribution of basic residues within protein secondary structure by Fourier analysis, functional and evolutionary aspects of these structural features, overview | Arabidopsis thaliana |
| More | the enzyme possesses N terminal alpha-helices with basic residues distributed asymmetrically, on a single face of the helix, termed basic faced alpha helices, BFAHs, which are unique to the aminoacyl-tRNA synthetases, structural analysis, determination of distribution of basic residues within protein secondary structure by Fourier analysis, functional and evolutionary aspects of these structural features, overview | Takifugu rubripes |
| More | the enzyme possesses N terminal alpha-helices with basic residues distributed asymmetrically, on a single face of the helix, termed basic faced alpha helices, BFAHs, which are unique to the aminoacyl-tRNA synthetases, structural analysis, determination of distribution of basic residues within protein secondary structure by Fourier analysis, functional and evolutionary aspects of these structural features, overview | Homo sapiens |
| More | the enzyme possesses N terminal alpha-helices with basic residues distributed asymmetrically, on a single face of the helix, termed basic faced alpha helices, BFAHs, which are unique to the aminoacyl-tRNA synthetases, structural analysis, determination of distribution of basic residues within protein secondary structure by Fourier analysis, functional and evolutionary aspects of these structural features, overview | Oryza sativa |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| ValRS | - |
Saccharomyces cerevisiae |
| ValRS | - |
Arabidopsis thaliana |
| ValRS | - |
Takifugu rubripes |
| ValRS | - |
Homo sapiens |
| ValRS | - |
Oryza sativa |
| Valyl-tRNA synthetase | - |
Saccharomyces cerevisiae |
| Valyl-tRNA synthetase | - |
Arabidopsis thaliana |
| Valyl-tRNA synthetase | - |
Takifugu rubripes |
| Valyl-tRNA synthetase | - |
Homo sapiens |
| Valyl-tRNA synthetase | - |
Oryza sativa |
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Release 2023.1 (January 2023)
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