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Literature summary for 6.1.1.15 extracted from

  • Jain, V.; Yogavel, M.; Oshima, Y.; Kikuchi, H.; Touquet, B.; Hakimi, M.A.; Sharma, A.
    Structure of prolyl-tRNA synthetase-halofuginone complex provides basis for development of drugs against malaria and toxoplasmosis (2015), Structure, 23, 819-829 .
    View publication on PubMed

Crystallization (Commentary)

Crystallization (Comment) Organism
hanging drop vapor diffusion method, using 0.1 M Bis-Tris (pH 6.5), 2 % (v/v) Tacsimate (pH 5.0), and 12% (w/v) polyethylene glycol 3350 Plasmodium falciparum

Inhibitors

Inhibitors Comment Organism Structure
6-fluoro-febrifugine
-
Plasmodium falciparum
6-fluoro-febrifugine
-
Toxoplasma gondii
7-bromo-6-chloro-3-[3-[3-hydroxy-2-piperidinyl]-2-oxopropyl]-4-quinazolinone
-
Plasmodium falciparum
7-bromo-6-chloro-3-[3-[3-hydroxy-2-piperidinyl]-2-oxopropyl]-4-quinazolinone
-
Toxoplasma gondii
febrifugine
-
Plasmodium falciparum
febrifugine
-
Toxoplasma gondii
halofuginone
-
Plasmodium falciparum
halofuginone
-
Toxoplasma gondii
tetrahydrofebrifugine
-
Plasmodium falciparum
tetrahydrofebrifugine
-
Toxoplasma gondii

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
ATP + L-proline + tRNAPro Toxoplasma gondii
-
AMP + diphosphate + L-prolyl-tRNAPro
-
?
ATP + L-proline + tRNAPro Plasmodium falciparum
-
AMP + diphosphate + L-prolyl-tRNAPro
-
?

Organism

Organism UniProt Comment Textmining
Plasmodium falciparum Q8I5R7
-
-
Toxoplasma gondii
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
adenosine 5'-(beta,gamma-imido)triphosphate + L-proline + tRNAPro
-
Toxoplasma gondii ?
-
?
adenosine 5'-(beta,gamma-imido)triphosphate + L-proline + tRNAPro
-
Plasmodium falciparum ?
-
?
ATP + L-proline + tRNAPro
-
Toxoplasma gondii AMP + diphosphate + L-prolyl-tRNAPro
-
?
ATP + L-proline + tRNAPro
-
Plasmodium falciparum AMP + diphosphate + L-prolyl-tRNAPro
-
?

Synonyms

Synonyms Comment Organism
Prolyl-tRNA synthetase
-
Toxoplasma gondii
Prolyl-tRNA synthetase
-
Plasmodium falciparum
PRS
-
Toxoplasma gondii
PRS
-
Plasmodium falciparum

Cofactor

Cofactor Comment Organism Structure
ATP
-
Toxoplasma gondii
ATP
-
Plasmodium falciparum

IC50 Value

IC50 Value IC50 Value Maximum Comment Organism Inhibitor Structure
0.000009
-
at pH 7.4 and 37°C Plasmodium falciparum halofuginone
0.000013
-
at pH 7.4 and 37°C Plasmodium falciparum 6-fluoro-febrifugine
0.000024
-
at pH 7.4 and 37°C Plasmodium falciparum febrifugine
0.000352
-
at pH 7.4 and 37°C Plasmodium falciparum tetrahydrofebrifugine