Any feedback?
Please rate this page
(literature.php)
(0/150)

BRENDA support

Literature summary for 5.4.2.7 extracted from

  • Horinouchi, N.; Kawano, T.; Sakai, T.; Matsumoto, S.; Sasaki, M.; Mikami, Y.; Ogawa, J.; Shimizu, S.
    Screening and characterization of a phosphopentomutase useful for enzymatic production of 2-deoxyribonucleoside (2009), N. Biotechnol., 26, 75-82.
    View publication on PubMed

Application

Application Comment Organism
biotechnology the Escherichia coli expressing Bacillus sphaericus phosphopentomutase is an excellent catalyst as to production of 2'-deoxyribonucleoside in the presence of acetaldehyde and phosphorylated compounds Lysinibacillus sphaericus

Cloned(Commentary)

Cloned (Comment) Organism
for expression in Escherichia coli BL21 star DE3 cells Escherichia coli
into the vectors pT7BlueT, pBluescript II SK, pTK7, and pET-21a+ for expression in Escherichia coli BL21 star DE3 cells Lysinibacillus sphaericus

Metals/Ions

Metals/Ions Comment Organism Structure
Mn2+
-
Lysinibacillus sphaericus

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
43000
-
determined by SDS-PAGE Lysinibacillus sphaericus
46000
-
determined by SDS-PAGE Escherichia coli

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
alpha-D-ribose 1-phosphate Lysinibacillus sphaericus
-
D-ribose 5-phosphate
-
?
alpha-D-ribose 1-phosphate Escherichia coli
-
D-ribose 5-phosphate
-
?
alpha-D-ribose 1-phosphate Lysinibacillus sphaericus AKU 229
-
D-ribose 5-phosphate
-
?

Organism

Organism UniProt Comment Textmining
Escherichia coli P0A6K6
-
-
Lysinibacillus sphaericus B3ITC5
-
-
Lysinibacillus sphaericus AKU 229 B3ITC5
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
alpha-D-ribose 1-phosphate
-
Lysinibacillus sphaericus D-ribose 5-phosphate
-
?
alpha-D-ribose 1-phosphate
-
Escherichia coli D-ribose 5-phosphate
-
?
alpha-D-ribose 1-phosphate
-
Lysinibacillus sphaericus AKU 229 D-ribose 5-phosphate
-
?

Synonyms

Synonyms Comment Organism
phosphopentomutase
-
Lysinibacillus sphaericus
phosphopentomutase
-
Escherichia coli
PPMase
-
Lysinibacillus sphaericus
PPMase
-
Escherichia coli