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Literature summary for 4.2.2.2 extracted from
- Functional implications of the b-helical protein fold: Differences in chemical and thermal stabilities of Erwinia chrysanthemi EC16 pectate lyases B, C, and E (2000), Arch. Biochem. Biophys., 381, 264-272.
General Stability
| General Stability | Organism |
|---|---|
| pectate lyase B, C and E are denatured by guanidine hydrochloride with transition midpoint concentrations of 1.3 mM, 1.1 mM and 1.8 mM | Dickeya chrysanthemi |
Localization
| Localization | Comment | Organism | GeneOntology No. | Textmining |
|---|---|---|---|---|
| extracellular | the bacterium secretes four pectate lyases: PLa, PLb, PLc and PLe | Dickeya chrysanthemi | - |
- |
Natural Substrates/ Products (Substrates)
| Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| additional information | Dickeya chrysanthemi | colonization of plant tissues by the phytopathogen Erwinia chrysanthemi E16 is aided by the activities of the pectate lyase isoenzymes, which depolymerize the polygalacturonic acid component of the plant cell walls | ? | - |
? |  |
| additional information | Dickeya chrysanthemi EC16 | colonization of plant tissues by the phytopathogen Erwinia chrysanthemi E16 is aided by the activities of the pectate lyase isoenzymes, which depolymerize the polygalacturonic acid component of the plant cell walls | ? | - |
? | |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Dickeya chrysanthemi | - |
EC16 | - |
| Dickeya chrysanthemi EC16 | - |
EC16 | - |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| additional information | colonization of plant tissues by the phytopathogen Erwinia chrysanthemi E16 is aided by the activities of the pectate lyase isoenzymes, which depolymerize the polygalacturonic acid component of the plant cell walls | Dickeya chrysanthemi | ? | - |
? | |
| additional information | colonization of plant tissues by the phytopathogen Erwinia chrysanthemi E16 is aided by the activities of the pectate lyase isoenzymes, which depolymerize the polygalacturonic acid component of the plant cell walls | Dickeya chrysanthemi EC16 | ? | - |
? | |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| pectate lyase B | - |
Dickeya chrysanthemi |
| pectate lyase C | - |
Dickeya chrysanthemi |
| pectate lyase E | - |
Dickeya chrysanthemi |
| PLB | - |
Dickeya chrysanthemi |
| PLC | - |
Dickeya chrysanthemi |
| PLE | - |
Dickeya chrysanthemi |
Temperature Optimum [°C]
| Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
|---|---|---|---|
| 35 | - |
pectate lyase C | Dickeya chrysanthemi |
| 40 | - |
pectate lyase b | Dickeya chrysanthemi |
Temperature Stability [°C]
| Temperature Stability Minimum [°C] | Temperature Stability Maximum [°C] | Comment | Organism |
|---|---|---|---|
| 39 | - |
transition midpoint of pectate lyase C is 38.9°C | Dickeya chrysanthemi |
| 44 | - |
transition midpoint of pectate lyase C is 44.3°C | Dickeya chrysanthemi |
| 47 | - |
transition midpoint of pectate lyase C is 46.9°C | Dickeya chrysanthemi |
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