Activating Compound | Comment | Organism | Structure |
---|---|---|---|
NH4+ | - |
Lactobacillus sp. | |
NH4+ | activates | Klebsiella pneumoniae | |
NH4+ | activates | Citrobacter freundii |
Application | Comment | Organism |
---|---|---|
synthesis | 1,3-propanediol, starting material for producing plastics, from glycerol relies on the activity of glycerol or diol dehydratases | Klebsiella pneumoniae |
synthesis | 1,3-propanediol, starting material for producing plastics, from glycerol relies on the activity of glycerol or diol dehydratases | Citrobacter freundii |
Inhibitors | Comment | Organism | Structure |
---|---|---|---|
glycerol | - |
Citrobacter freundii | |
glycerol | - |
Klebsiella pneumoniae |
Metals/Ions | Comment | Organism | Structure |
---|---|---|---|
K+ | - |
Lactobacillus sp. | |
K+ | activates | Klebsiella pneumoniae | |
K+ | activates | Citrobacter freundii | |
Rb+ | - |
Lactobacillus sp. | |
Rb+ | activates | Klebsiella pneumoniae | |
Rb+ | activates | Citrobacter freundii |
Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
---|---|---|---|
16121 | - |
alpha2,beta2,gamma2, 2 * 60433 + 2 * 21487 + 2 * 16121, calculation from sequence of amino acid | Citrobacter freundii |
16722 | - |
alpha2,beta2,gamma2, 2 * 60813 + 2 * 19549 + 2 * 16722, calculation from sequence of amino acid | Clostridium pasteurianum |
19549 | - |
alpha2,beta2,gamma2, 2 * 60813 + 2 * 19549 + 2 * 16722, calculation from sequence of amino acid | Clostridium pasteurianum |
21487 | - |
alpha2,beta2,gamma2, 2 * 60433 + 2 * 21487 + 2 * 16121, calculation from sequence of amino acid | Citrobacter freundii |
60433 | - |
alpha2,beta2,gamma2, 2 * 60433 + 2 * 21487 + 2 * 16121, calculation from sequence of amino acid | Citrobacter freundii |
60813 | - |
alpha2,beta2,gamma2, 2 * 60813 + 2 * 19549 + 2 * 16722, calculation from sequence of amino acid | Clostridium pasteurianum |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
glycerol | Klebsiella pneumoniae | - |
? | - |
? | |
glycerol | Pantoea agglomerans | - |
? | - |
? | |
glycerol | Clostridium pasteurianum | - |
? | - |
? | |
glycerol | Levilactobacillus brevis | - |
? | - |
? | |
glycerol | Lactobacillus sp. | - |
? | - |
? | |
glycerol | Clostridium butyricum | - |
? | - |
? | |
glycerol | Citrobacter freundii | - |
? | - |
? | |
glycerol | Lentilactobacillus buchneri | - |
? | - |
? | |
glycerol | Limosilactobacillus reuteri | - |
? | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Citrobacter freundii | - |
- |
- |
Clostridium butyricum | - |
- |
- |
Clostridium pasteurianum | - |
- |
- |
Klebsiella pneumoniae | - |
- |
- |
Lactobacillus sp. | - |
- |
- |
Lentilactobacillus buchneri | - |
- |
- |
Levilactobacillus brevis | - |
- |
- |
Limosilactobacillus reuteri | - |
- |
- |
Pantoea agglomerans | - |
- |
- |
Reaction | Comment | Organism | Reaction ID |
---|---|---|---|
glycerol = 3-hydroxypropanal + H2O | mechanism of enzyme reaction | Klebsiella pneumoniae | |
glycerol = 3-hydroxypropanal + H2O | mechanism of enzyme reaction | Pantoea agglomerans | |
glycerol = 3-hydroxypropanal + H2O | mechanism of enzyme reaction | Clostridium pasteurianum | |
glycerol = 3-hydroxypropanal + H2O | mechanism of enzyme reaction | Levilactobacillus brevis | |
glycerol = 3-hydroxypropanal + H2O | mechanism of enzyme reaction | Lactobacillus sp. | |
glycerol = 3-hydroxypropanal + H2O | mechanism of enzyme reaction | Clostridium butyricum | |
glycerol = 3-hydroxypropanal + H2O | mechanism of enzyme reaction | Citrobacter freundii | |
glycerol = 3-hydroxypropanal + H2O | mechanism of enzyme reaction | Lentilactobacillus buchneri | |
glycerol = 3-hydroxypropanal + H2O | mechanism of enzyme reaction | Limosilactobacillus reuteri |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
glycerol | - |
Pantoea agglomerans | 3-hydroxypropanal + H2O | 3-hydroxypropionaldehyde | ? | |
glycerol | - |
Levilactobacillus brevis | 3-hydroxypropanal + H2O | 3-hydroxypropionaldehyde | ? | |
glycerol | - |
Lactobacillus sp. | 3-hydroxypropanal + H2O | 3-hydroxypropionaldehyde | ? | |
glycerol | - |
Clostridium butyricum | 3-hydroxypropanal + H2O | 3-hydroxypropionaldehyde | ? | |
glycerol | - |
Lentilactobacillus buchneri | 3-hydroxypropanal + H2O | 3-hydroxypropionaldehyde | ? | |
glycerol | - |
Limosilactobacillus reuteri | 3-hydroxypropanal + H2O | 3-hydroxypropionaldehyde | ? | |
glycerol | preferred substrate | Klebsiella pneumoniae | 3-hydroxypropanal + H2O | 3-hydroxypropionaldehyde | ? | |
glycerol | preferred substrate | Clostridium pasteurianum | 3-hydroxypropanal + H2O | 3-hydroxypropionaldehyde | ? | |
glycerol | preferred substrate | Citrobacter freundii | 3-hydroxypropanal + H2O | 3-hydroxypropionaldehyde | ? | |
glycerol | glycerol fermentation | Klebsiella pneumoniae | 3-hydroxypropanal + H2O | 3-hydroxypropionaldehyde | ? | |
glycerol | glycerol fermentation | Citrobacter freundii | 3-hydroxypropanal + H2O | 3-hydroxypropionaldehyde | ? | |
glycerol | - |
Klebsiella pneumoniae | ? | - |
? | |
glycerol | - |
Pantoea agglomerans | ? | - |
? | |
glycerol | - |
Clostridium pasteurianum | ? | - |
? | |
glycerol | - |
Levilactobacillus brevis | ? | - |
? | |
glycerol | - |
Lactobacillus sp. | ? | - |
? | |
glycerol | - |
Clostridium butyricum | ? | - |
? | |
glycerol | - |
Citrobacter freundii | ? | - |
? | |
glycerol | - |
Lentilactobacillus buchneri | ? | - |
? | |
glycerol | - |
Limosilactobacillus reuteri | ? | - |
? |
Subunits | Comment | Organism |
---|---|---|
hexamer | alpha2,beta2,gamma2, 2 * 60433 + 2 * 21487 + 2 * 16121, calculation from sequence of amino acid | Citrobacter freundii |
hexamer | alpha2,beta2,gamma2, 2 * 60813 + 2 * 19549 + 2 * 16722, calculation from sequence of amino acid | Clostridium pasteurianum |
Cofactor | Comment | Organism | Structure |
---|---|---|---|
5,6-Dimethylbenzimidazolylcobamide | coenzyme required | Klebsiella pneumoniae | |
5,6-Dimethylbenzimidazolylcobamide | coenzyme required | Pantoea agglomerans | |
5,6-Dimethylbenzimidazolylcobamide | coenzyme required | Clostridium pasteurianum | |
5,6-Dimethylbenzimidazolylcobamide | coenzyme required | Levilactobacillus brevis | |
5,6-Dimethylbenzimidazolylcobamide | coenzyme required | Lactobacillus sp. | |
5,6-Dimethylbenzimidazolylcobamide | coenzyme required | Citrobacter freundii | |
5,6-Dimethylbenzimidazolylcobamide | coenzyme required | Lentilactobacillus buchneri | |
5,6-Dimethylbenzimidazolylcobamide | coenzyme required | Limosilactobacillus reuteri |