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Literature summary for 4.1.1.1 extracted from
- Production and phenotypic analysis of rice transgenics with altered levels of pyruvate decarboxylase and alcohol dehydrogenase proteins (2007), Plant Physiol. Biochem., 45, 637-646.
Activating Compound
| Activating Compound | Comment | Organism | Structure |
|---|---|---|---|
| additional information | induction of pdc1 is possibly a longterm response and pdc2 a short term response | Oryza sativa |
Cloned(Commentary)
| Cloned (Comment) | Organism |
|---|---|
| induction of pdc1 is possibly a longterm response and pdc2 a short term response, expression analysis of genes pdc1 and pdc2 in shoots of wild-type and recombinant seedlings, expression of mutant genes in calli of cultivar Pusa Basmati 1 via Agrobacterium tumefaciens strain EHA105 transformation | Oryza sativa |
Crystallization (Commentary)
| Crystallization (Comment) | Organism |
|---|---|
| overexpression and downregulation of pdcI in transgenic Oryza sativa plants, pattern of expression, the alpha-subunit is encoded by pdc2 and that beta-subunit is encoded by pdc1 | Oryza sativa |
Protein Variants
| Protein Variants | Comment | Organism |
|---|---|---|
| additional information | production and phenotypic analysis of rice transgenics with altered levels of pyruvate decarboxylase protein, Pdc overexpressing rice transgenics at early seedling stage under unstressed control growth conditions showed slight, consistent advantage in root vigour as compared to that of wild-type seedlings, overview | Oryza sativa |
Metals/Ions
| Metals/Ions | Comment | Organism | Structure |
|---|---|---|---|
| Mg2+ | - |
Oryza sativa |  |
Molecular Weight [Da]
| Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
|---|---|---|---|
| 62000 | - |
x * 64000, alpha-subunit + x * 62000, beta-subunit | Oryza sativa |
| 64000 | - |
x * 64000, alpha-subunit + x * 62000, beta-subunit | Oryza sativa |
Natural Substrates/ Products (Substrates)
| Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| pyruvate | Oryza sativa | Pdc is involved in the operation of ethanolic fermentation pathway that appears to correlate to an extent with anoxia tolerance in plants, overview | acetaldehyde + CO2 | - |
? | |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Oryza sativa | A2XFI3 | cultivar Pusa Basmati 1, genes pdc1 and pdc2, pdc gene family | - |
Source Tissue
| Source Tissue | Comment | Organism | Textmining |
|---|---|---|---|
| leaf | - |
Oryza sativa | - |
| root | - |
Oryza sativa | - |
| seedling | - |
Oryza sativa | - |
| shoot | - |
Oryza sativa | - |
Specific Activity [micromol/min/mg]
| Specific Activity Minimum [µmol/min/mg] | Specific Activity Maximum [µmol/min/mg] | Comment | Organism |
|---|---|---|---|
| additional information | - |
- |
Oryza sativa |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| pyruvate | - |
Oryza sativa | acetaldehyde + CO2 | - |
? | |
| pyruvate | Pdc is involved in the operation of ethanolic fermentation pathway that appears to correlate to an extent with anoxia tolerance in plants, overview | Oryza sativa | acetaldehyde + CO2 | - |
? | |
Subunits
| Subunits | Comment | Organism |
|---|---|---|
| ? | x * 64000, alpha-subunit + x * 62000, beta-subunit | Oryza sativa |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| PDC | - |
Oryza sativa |
Cofactor
| Cofactor | Comment | Organism | Structure |
|---|---|---|---|
| thiamine diphosphate | - |
Oryza sativa | |
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