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Literature summary for 3.6.1.23 extracted from

  • Li, G.L.; Wang, J.; Li, L.F.; Su, X.D.
    Crystallization and preliminary X-ray analysis of three dUTPases from Gram-positive bacteria (2009), Acta Crystallogr. Sect. F, 65, 339-342.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
gene dut, DNA and amino acid sequence determination and analysis, high level overexpression of N-terminally His6-tagged enzyme in Escherichia coli strain BL21(DE3) Streptococcus mutans
genes yncF and yosS, DNA and amino acid sequence determination and analysis, high level overexpression of N-terminally His6-tagged enzymes in Escherichia coli strain BL21(DE3) Bacillus subtilis

Crystallization (Commentary)

Crystallization (Comment) Organism
purified recombinant enzyme, sitting drop vapour diffusion method, 15 mg/ml protein in 20 mM Tris-HCl, and 150 mM NaCl, pH 7.5, with 0.2 M MgCl2, 25% w/v PEG 3350, 0.1 M Tris-HCl, pH 8.5, X-ray diffraction structure determination and analysis at 1.3 A resolution Streptococcus mutans
purified recombinant selenomethionine-labelled YosS and YncF, hanging drop vapour diffusion method, for YosS: 30 mg/ml protein in 20 mM Tris-HCl, and 150 mM NaCl, pH 7.5, with 2.0 M ammonium sulfate, 0.2 M potassium/sodium tartrate, 0.1 M trisodium citrate, pH 5.6, in 3 days, for YncF: 20 mg/ml protein in 20 mM Tris-HCl, and 150 mM NaCl, pH 7.5, with 0.2 M trimethylamine N-oxide dehydrate, 15% w/v PEG MME 2000, 0.1 M Tris-HCl, pH 9.0, in two weeks, X-ray diffraction structure determination and analysis at 2.3 A and 1.7 A resolution, respectively Bacillus subtilis

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
16100
-
3 * 16100, SDS-PAGE Streptococcus mutans

Organism

Organism UniProt Comment Textmining
Bacillus subtilis
-
genes yncF and yosS
-
Streptococcus mutans
-
gene DUT
-

Purification (Commentary)

Purification (Comment) Organism
recombinant N-terminally His6-tagged enzyme from Escherichia coli strain BL21(DE3) by nickel affinity and gel filtration Bacillus subtilis
recombinant N-terminally His6-tagged enzymes from Escherichia coli strain BL21(DE3) by nickel affinity and gel filtration Streptococcus mutans

Subunits

Subunits Comment Organism
homotrimer
-
Bacillus subtilis
homotrimer 3 * 16100, SDS-PAGE Streptococcus mutans

Synonyms

Synonyms Comment Organism
dUTPase
-
Bacillus subtilis
dUTPase
-
Streptococcus mutans
YncF
-
Bacillus subtilis
YosS
-
Bacillus subtilis