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Literature summary for 3.5.1.6 extracted from

  • Zrenner, R.; Riegler, H.; Marquard, C.R.; Lange, P.R.; Geserick, C.; Bartosz, C.E.; Chen, C.T.; Slocum, R.D.
    A functional analysis of the pyrimidine catabolic pathway in Arabidopsis (2009), New Phytol., 183, 117-132.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
expression of GFP-tagged PYD3 in Arabdiopsis thaliana via Agrobacterium-mediated transformation using the floral dip method. Quantitative real-time RT-PCR analysis of PYD expression in wild-type and pyd mutants, overview Arabidopsis thaliana

Protein Variants

Protein Variants Comment Organism
additional information construction of a T-DNA knockout mutant of gene PYD3, the mutant exhibits no obvious phenotype under optimal growing conditions, but the pyd3 mutant is unable to catabolize [2-14C]-uracil or to grow on uracil as the sole nitrogen source Arabidopsis thaliana

Localization

Localization Comment Organism GeneOntology No. Textmining
cytosol
-
Arabidopsis thaliana 5829
-

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
N-carbamoyl-beta-alanine + H2O Arabidopsis thaliana
-
beta-alanine + CO2 + NH3
-
?

Organism

Organism UniProt Comment Textmining
Arabidopsis thaliana Q8H183
-
-

Source Tissue

Source Tissue Comment Organism Textmining
seedling expression anaylsis, overview Arabidopsis thaliana
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
N-carbamoyl-beta-alanine + H2O
-
Arabidopsis thaliana beta-alanine + CO2 + NH3
-
?

Synonyms

Synonyms Comment Organism
beta-ureidopropionase
-
Arabidopsis thaliana
PYD3
-
Arabidopsis thaliana

General Information

General Information Comment Organism
metabolism PYD3 is involved in the reductive pathway for the degradation of pyrimidine nucleotides, functional and mutational analysis of the catabolic pathway, overview Arabidopsis thaliana